Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00392 ATGGCTCGCAAGAAGATCAGAGAGTACGATTCAAAGAGATTGTTGAAGGAGCACTTCAAGAGAATCTCCGGTAGGGAATTACCGATTAAATCCGCGCAAGTTACTGAATCCACTGATTTTAATGCACTAGCTGAAAAGGAACCTTGGCTCTTGTCCTCAAAATTGGTTGTGAAACCAGACATGTTGTTTGGAAAGCGTGGAAAAAGTGGTTTAGTTGCCTTGAATCTTGATTTAGCTGAAGTGGCCATTTTTGTGAAAGAGCGTCTTGGCAAAGAGGTTGAAATGGGTGGATGTAAGGGACCCATCACAACATTCATTGTAGAACCTTTTATTCCACACAGTGATGAGTTCTACCTTAATATTGTATCGGAGAGACTTGGAAGCAGTATAAGCTTTTCAGAATGTGGAGGAATTGAAATTGAAGAAAACTGGGAGAAGGTCAAGACTATTTTTGTCCCGACAGGAGTTTCCCTTACATCTGAAATTTGGGCTCCTCTCTTTGTGACGCTTCCTTTGGAGATAAAGGGAGAAATAGAAGAGTTTCTCAAGACAGTTTTTGCCATATTTCAAGAACTGGACTTTACGTTCCTCGAGATGAATCCTTTTACACTGGTTGATGGGAAGCCTTATCCTTTGGATATGAGAGGCGAACTAGATGACACTGCCGCTTTCAAAAATTTCAAAAAGTGGGGGGAGATTGAATTTCCATTGCCATTTGGAAGAGTTCTTAGTGCTACAGAAAGTTTCATTCATGGTCTAGACGAAAAGACAAGTGCATCATTAAAATTTACTGTCCTGAACCCAAGAGGACGAATTTGGACTATGGTAGCCGGAGGAGGTGCAAGTGTCATATATGCAGACACAGTGGGAGATTTGGGTTATGCCTCTGAACTTGGGAACTACGCAGAATACAGTGGCGCACCAAATGAAGAGGAAGTGTTGCAGTATGCTAGAGTTGTAATTGATTGTGCAACTTCAAATCCTGATGGCCGCAAAAGGGCCCTTGTAATTGGAGGAGGAATTGCAAACTTTACCGATGTGGCTGCCACATTTAACGGCATAATTAGAGCCTTGAAGGAGAAGGAAGCAAATCTTAAAGCATCTCGGATGAGTATTTATGTAAGGAGAGGGGGTCCAAACTACCAAAGAGGCCTTGCAAAAATGCGCTCCCTCGGAGAAGAACTCGGTGTTCCCATCGAGGTCTATGGACCTGAAGCAACAATGACAGAAGAAGCTCCTATCCATGGGGATATTTTAGAGGCTATATTTTCGCACATGCCGCTTATCCATCTCCACCCGGCCTCGCACGTCTCGGAAACGTGGAATCAGGCTGTGGTTTCGTCTCTTCGTCACCTTAGAGTTGTTAAGCCGTGGCTTATCCTTCACTCGCAGACCACTCGATCGCCGTTCCTCACTGCTACTCACGCGTTCGATCCTCGTTCGAACGTCTGGATAGAGATTCAACGGCCATGCATCAGTTCCGTCTCCGCCATTCGGTCCTCTCACTCCACCCTCCTCTACGTGATTTCGCCGTCCAAAATTGTCTTCTCCAACGACCCGCTCCTCCAAACGTGGCGTGAGGTTGATGTCCGACTCGGTTTGAGGCCCGACCCCATTGTAGCGACGGTGGGCCACCATCTGATGATAGCCGGAGGCGACTGTAATTTTCCAGACGATGATCTTTTCGCCATTGAAATTTACGACCTCCGGACTCGAAGTTGGGAGAGTAGCCAGCCAATTCCGGAGCCCTTCAGAGACTCCTTAGCTTCCACATGGCTCTCGGTCGCCGTCGACGGCAGCAAAATGTACGTTTCCGATAAAAGCTCTGGCATCACCTATTCATTCAACCCAACCACCAAAACGTGGTGTGGGCCGTACGATCTGCGTCCGGATAGAGGGATTTTCTTCTCCGTCATTGGGTTCACCGGCGACCGTCTGATTCTCGTGGGTCTACTCGGAGACTCGGAAAACGTCAGCAGCATCAAAATATGGGAAGTAAATGCGGAGAATTTCGACTGTGAAGAGATGGCGGAAATTCCAACGATTCTGATCGAGAAGTTGAAGGGAGAGAGTGATTCACTCTCGTCCATTGAGATGGCAGCCATGGGTGAGCACGTCTTCATACACAACAACTCAAACCCCGGCGAAATTATCATGTGCGAGATGACCCGGCGAGTTTGCCATTGGAGTAGCATCCCAAACGTCGTCATTCATGATCGCAGTCGCATGCAGCGGTTCGTCCTTACGTGCTCACCGGTGAGCTTAGAAGACCTGGACAATGCTTCGAGATTGGGAAACATTAAATTCGCCATTAAAATGTAA 2322 46.99 MARKKIREYDSKRLLKEHFKRISGRELPIKSAQVTESTDFNALAEKEPWLLSSKLVVKPDMLFGKRGKSGLVALNLDLAEVAIFVKERLGKEVEMGGCKGPITTFIVEPFIPHSDEFYLNIVSERLGSSISFSECGGIEIEENWEKVKTIFVPTGVSLTSEIWAPLFVTLPLEIKGEIEEFLKTVFAIFQELDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGEIEFPLPFGRVLSATESFIHGLDEKTSASLKFTVLNPRGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATSNPDGRKRALVIGGGIANFTDVAATFNGIIRALKEKEANLKASRMSIYVRRGGPNYQRGLAKMRSLGEELGVPIEVYGPEATMTEEAPIHGDILEAIFSHMPLIHLHPASHVSETWNQAVVSSLRHLRVVKPWLILHSQTTRSPFLTATHAFDPRSNVWIEIQRPCISSVSAIRSSHSTLLYVISPSKIVFSNDPLLQTWREVDVRLGLRPDPIVATVGHHLMIAGGDCNFPDDDLFAIEIYDLRTRSWESSQPIPEPFRDSLASTWLSVAVDGSKMYVSDKSSGITYSFNPTTKTWCGPYDLRPDRGIFFSVIGFTGDRLILVGLLGDSENVSSIKIWEVNAENFDCEEMAEIPTILIEKLKGESDSLSSIEMAAMGEHVFIHNNSNPGEIIMCEMTRRVCHWSSIPNVVIHDRSRMQRFVLTCSPVSLEDLDNASRLGNIKFAIKM 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4433822 4439699 - BLOR00392 Blo01g00392 54832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00392 773 Gene3D - 442 683 IPR015915 GO:0005515
Blo01g00392 773 PANTHER ATP-CITRATE SYNTHASE 1 410 - -
Blo01g00392 773 SUPERFAMILY Kelch motif 457 709 IPR015915 GO:0005515
Blo01g00392 773 Gene3D - 240 421 IPR016102 -
Blo01g00392 773 PANTHER - 1 410 - -
Blo01g00392 773 Pfam ATP citrate lyase citrate-binding 241 410 IPR032263 -
Blo01g00392 773 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Blo01g00392 773 Gene3D - 1 233 - -
Blo01g00392 773 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Blo01g00392 773 Pfam ATP-grasp domain 6 203 IPR013650 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00392 Blo16g01097 BCT
Blo01g00392 Blo16g01163 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00392 Blo-Chr1:4433822 Blo17g00701 Blo-Chr17:19434190 0 dispersed
Blo06g00887 Blo-Chr6:32104831 Blo01g00392 Blo-Chr1:4433822 1.33E-106 transposed
Blo01g00392 Blo-Chr1:4433822 Blo16g01163 Blo-Chr16:40167161 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00392 K01648 - rcu:8276478 753.821