Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00398 ATGGCGGCCAGGAGATTCTCCAAGCTTTTTTCTCGCTCCTTTGCTTCTCCTTCTTCCTTCGTAGGCAAAGGTACGAATCCTTACGTGCGTAGAGCAATCGGAAAATACAGCACTGCGGCAGCCATTGAAGAACCTATCAATCCGTCTATCAACGTCAAGTACACTCAGCTTTTGATCAATGGCCAATTTGTCGATTCAGCTTCCGGAAAAACTTTTCCGACTTTGGACCCGAGGACCGGCGACGTAATCGCTCATGTTGCTGAGGGAGATGCGGAAGACATTGATCGAGCGGTTGTAGCCGCTCGCCGAGCATTTGACGAGGGACCATGGCCAAAGATGACTGCTTATGAACGATCTCGGATTATCCTGCGGTTCGCCGATTTAATGGAGAAGCACAACGATGAAATCGCGGCTCTTGAAACTTGGGATAATGGGAAGCCATATGAACAGTCTGCGCAAGCTGAAATTCCTTTGCTAGTTCGTTTGTTCCGCTACTATGGAGGTTGGGCGGATAAGATCCACGGCCTTACAGTTCAGGCCGACAGCCCTCACCATGTTCAAATCTTGCATGAACCGATCGGCGTTGTGGGTCAGATTATTCCATGGAATTTTCCTCTTCTCATGTACGCATGGAAGGTTGGACCAGCCCTGGCCTGTGGAAACACCATTGTTCTTAAAACAGCTGAGCAGACTCCATTGTCTGCCCTGTTTATAACGAAGTTATTACACGAGGCCGGACTTCCTGATGGTGTGATTAACATTGTTTCTGGTTTTGGACCTACTGCCGGTGCTGCTCTTGCCAGTCATATGGATGTCGACAAGCTTGCTTTCACTGGTTCGACCGAAACTGGTAAAATCGTGCTTGGATTGTCAGCACAAAGCAATCTTAAGCCGGTAACTTTGGAACTCGGGGGAAAATCCCCTTTCATCGTCTGTGAGGATGCTGACGTCGATACGGCCGTCGAGCTTGCTCATTTTGCTCTATTCTTTAACCAGGGTCAATGCTGCTGCGCTGGTTCTCGTACTTTCGTACACGAAAGTGTATATGATGAGTTCTTGGAGAAAGCAAAGGAGCGAGCTATTAAACGAGTTGTCGGCGATCCGTTCAAGGAGGGTATCGAGCAAGGGCCTCAAATTGATGCCGAACAGTTCGAAAAGATTCTGAGATACATAAAATCTGGAGTTGAAAGTGGAGCTAATCTCGAAACTGGAGGAGAGAGGATTGGCTCAAAGGGTTATTATATCAAACCCACTGTCTTCTCAAACGTTCAGGATGATATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTTCAGTCAATTTTGAAGTTCAAAAAACTCGACGAGGTTGTTAAGAGGGCAAACGCGAGCCGTTTTGGTCTGGCAGCCGGAATATTCACGAAGAACATTGATACTGCCAATACCTTAACCCGAGCTCTGCGAGTAGGAACGGTTTGGGTGAATTGTTTCGATGTATTCGATGCTGCAATTCCATTTGGTGGGTATAAGATGAGTGGAACTGGAAGGGAAAAAGGAATTTACAGCCTCAGTAATTATCTTCAGGTCAAGGCTGTCATCACTTCCTTGAAGAATCCTGCGTGGCTTTAG 1608 47.01 MAARRFSKLFSRSFASPSSFVGKGTNPYVRRAIGKYSTAAAIEEPINPSINVKYTQLLINGQFVDSASGKTFPTLDPRTGDVIAHVAEGDAEDIDRAVVAARRAFDEGPWPKMTAYERSRIILRFADLMEKHNDEIAALETWDNGKPYEQSAQAEIPLLVRLFRYYGGWADKIHGLTVQADSPHHVQILHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFITKLLHEAGLPDGVINIVSGFGPTAGAALASHMDVDKLAFTGSTETGKIVLGLSAQSNLKPVTLELGGKSPFIVCEDADVDTAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLEKAKERAIKRVVGDPFKEGIEQGPQIDAEQFEKILRYIKSGVESGANLETGGERIGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQSILKFKKLDEVVKRANASRFGLAAGIFTKNIDTANTLTRALRVGTVWVNCFDVFDAAIPFGGYKMSGTGREKGIYSLSNYLQVKAVITSLKNPAWL 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4515469 4518297 - BLOR00398 Blo01g00398 54838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00398 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 535 - -
Blo01g00398 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Blo01g00398 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Blo01g00398 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491
Blo01g00398 535 CDD ALDH_F2BC 52 527 - -
Blo01g00398 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491
Blo01g00398 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Blo01g00398 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 22 535 - -
Blo01g00398 535 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00398 Blo11g00908 CCT
Blo01g00398 Blo11g00908 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00398 Blo-Chr1:4515469 Blo08g00284 Blo-Chr8:3853546 0 dispersed
Blo11g00907 Blo-Chr11:18667073 Blo01g00398 Blo-Chr1:4515469 5.72E-23 dispersed
Blo16g00194 Blo-Chr16:4340272 Blo01g00398 Blo-Chr1:4515469 4.77E-12 dispersed
Blo02g00869 Blo-Chr2:33613475 Blo01g00398 Blo-Chr1:4515469 2.79E-107 transposed
Blo05g00037 Blo-Chr5:317619 Blo01g00398 Blo-Chr1:4515469 1.24E-45 transposed
Blo05g00732 Blo-Chr5:25866182 Blo01g00398 Blo-Chr1:4515469 2.25E-37 transposed
Blo08g00098 Blo-Chr8:1007086 Blo01g00398 Blo-Chr1:4515469 2.54E-25 transposed
Blo11g00908 Blo-Chr11:18701334 Blo01g00398 Blo-Chr1:4515469 0 transposed
Blo12g01125 Blo-Chr12:28877374 Blo01g00398 Blo-Chr1:4515469 4.53E-37 transposed
Blo13g00204 Blo-Chr13:8418872 Blo01g00398 Blo-Chr1:4515469 3.33E-10 transposed
Blo15g00791 Blo-Chr15:27024539 Blo01g00398 Blo-Chr1:4515469 3.39E-99 transposed
Blo16g00548 Blo-Chr16:22500135 Blo01g00398 Blo-Chr1:4515469 2.09E-36 transposed
Blo16g00906 Blo-Chr16:36928002 Blo01g00398 Blo-Chr1:4515469 1.47E-50 transposed
Blo01g00398 Blo-Chr1:4515469 Blo16g01155 Blo-Chr16:40075129 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00398 K00128 - zju:107428629 892.878