Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00404 ATGGGAGGGAAAAAGTGGGAAGCAGTCTCGTTCGCAGTGATGGTTAGCATGGAAGGGTGCGCCATAGGATTGACTGTGGCTGCTAAAACTGCCATTACTTATGGTTTAAGCCCTTTTGTCTTTGTTTTCTACACTAATGCTCTTGCCTCTCTCATCCTCCTGCCTTATTCTTTCTTATTTCACGGCGCTGACAGAACAGAACAGCCTCTTTTCACCTCTCCTCTCTTCACCCGCTTCTTCCTTCTCGGTTTAACTGGGATATGTATCTCTCAGAACCTTGCATTTCTTGGGCTAACGTACAGCTCCCCAATCGTTGTATGCGCAATGGGCCTTCTCATCCCCTCCATTTCTTTCTTCCTCGCCATCCTGCTCAGGAAAACAAGGATTGATTGGAGAAGCTCAAGCTTTCAAGCCAAAATAACAGGCTCCTTAATCTCAATCGCAGGGGCAGCAGTGGTGATTCTCTACAGAGGCCCTTTGGTGGACAAACCTTCCTCTTCTTCCCATAAATTCAAGCATAATTTCTTTGTTTTTACTTCTTCAGTTGAGAACTGGGCCCTTGGTGGCCTTTTATTCGCAGCTGCCGCCTTATCTGTGTCTGTATGGAACCTAATCCAGCTGGGAACTTTAAAACATTACCCGCAAGTGATGAAAGTGGCCTCATTTTACAGCCTGCTCGGCACAGTTCAGTGTGCTGTAGTATGCGCTTTCATTGAAAGAGACGTAGATGCATGGAAGATAAAGCCTAATTTGGATCTTCTTCTCATAGTCGCCACAGCCATTTTTGGAGTTGTATTTAAAACCCGTATTCATTTATGGTGCATGACGACGAAAGGGCCGCTCTACGTGCCCATGTTCCGGCCGTTTGGCATCGTTTTCGCCACCACTTTTGGCTCTACAGTTTTCGCAAATAGTTTTCGTTATGGAAGACGGGAAAGATCGGTTTCACAGACAGGAAAACTCACCTTGCAAAGCGATGTATATGCATTTGGAGTAGTTCTTCTCGAGCTTTTGACGGCACGACAAGCAGCGGAGCTAAACCAAGGACCAAACGCTCAAAATCGAGTTCTACAAGTAAGGCATATACTGAATGATGTTAAAAGGCTGCGAAAGTTGATTGATCCGGACTTGAGTCGAAGCTCCAACTCGACGGAATCTGTGGCCATGTATGCAAATCTAGCATCGAGGTGCGTTAGCATAGAGAGCATCGAGAGACCTTCAATGGCGGAACGTGTAAACGAACTTTAA 1248 45.99 MGGKKWEAVSFAVMVSMEGCAIGLTVAAKTAITYGLSPFVFVFYTNALASLILLPYSFLFHGADRTEQPLFTSPLFTRFFLLGLTGICISQNLAFLGLTYSSPIVVCAMGLLIPSISFFLAILLRKTRIDWRSSSFQAKITGSLISIAGAAVVILYRGPLVDKPSSSSHKFKHNFFVFTSSVENWALGGLLFAAAALSVSVWNLIQLGTLKHYPQVMKVASFYSLLGTVQCAVVCAFIERDVDAWKIKPNLDLLLIVATAIFGVVFKTRIHLWCMTTKGPLYVPMFRPFGIVFATTFGSTVFANSFRYGRRERSVSQTGKLTLQSDVYAFGVVLLELLTARQAAELNQGPNAQNRVLQVRHILNDVKRLRKLIDPDLSRSSNSTESVAMYANLASRCVSIESIERPSMAERVNEL 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4558253 4561731 + BLOR00404 Blo01g00404 54844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00404 415 PANTHER WAT1-RELATED PROTEIN 7 310 IPR030184 GO:0016021|GO:0022857
Blo01g00404 415 Gene3D Transferase(Phosphotransferase) domain 1 293 415 - -
Blo01g00404 415 SUPERFAMILY Protein kinase-like (PK-like) 318 413 IPR011009 -
Blo01g00404 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 157 - -
Blo01g00404 415 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Blo01g00404 415 PANTHER WAT1-RELATED PROTEIN 7 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00404 Blo-Chr1:4558253 Blo10g00468 Blo-Chr10:9752077 1.01E-60 dispersed
Blo01g00404 Blo-Chr1:4558253 Blo16g01151 Blo-Chr16:40037414 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84078 PF00892 EamA 6.20E-07 CL0184 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00404 - - jre:108979402 377.867