Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo01g00410 | ATGTCATCACACACGGATCTGAACCGTCAGATCGAGCACCTGATGGAGTGCAAGCCATTGCCCGAGGCAGAGGTTAAGACGCTCTGTGATCAGGCGAGGACAATACTTGTAGAGGAGTCGAACGTACAGCCCGTTAAGTGCCCGGTGACAGTCTGTGGAGATATCCATGGTCAGTTCTATGACCTCATCGAACTGTTTCGGATAGGAGGTAACGCGCCAGACACGAATTACCTCTTTATGGGCGATTACGTTGATCGTGGGTACTACTCTGTGGAGACTGTCACACTTTTAGTGGCTTTAAAAGTTCGTTATAGAGACAGGATAACAATATTGAGGGGGAATCATGAGAGCAGACAAATAACTCAAGTATACGGATTTTATGATGAATGCTTGAGGAAATATGGAAATGCCAACGTTTGGAAATCCTTTACTGATCTTTTTGATTATCTACCTTTAACAGCTCTTATCGAGAGTCAGGTATTCTGTTTGCATGGAGGACTTTCTCCTTCTCTAGATACCTTAGACAATATACAAGCTTTGGATCGCATACAAGAGGTTCCACATGAAGGACCTATGTGTGACCTTTTGTGGTCTGATCCCGATGACCGATGTGGGTGGGGAATATCCCCACGTGGTGCTGGTTATACATTTGGGCAGGATATAGCTTCTCAATTCAACCATATTAATGGGCTCACTCTGATATCAAGAGCACACCAGCTTGTTATGGAAGGTTACAACTGGTGTCAGGAGAAAAATGTGGTGACTGTATTCAGTGCTCCAAACTATTGCTACCGGTGTGGAAACATGGCTGCTATATTGGAGATTGGAGAGAATATGGATCAGAATTTTCTACAGTTTGACCCTGCTCCACGGCAAATTGAGCCTGATGCCACACGCAAGACTCCTGATTATTTTCTCTGA | 921 | 44.63 | MSSHTDLNRQIEHLMECKPLPEAEVKTLCDQARTILVEESNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKSFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIQALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHINGLTLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDATRKTPDYFL | 306 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 4641661 | 4645417 | - | BLOR00410 | Blo01g00410 | 54850 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo01g00410 | 306 | Gene3D | - | 1 | 306 | IPR029052 | - | |
| Blo01g00410 | 306 | SUPERFAMILY | Metallo-dependent phosphatases | 4 | 292 | IPR029052 | - | |
| Blo01g00410 | 306 | SMART | pp2a_7 | 20 | 290 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 111 | 116 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED | 1 | 306 | - | - | |
| Blo01g00410 | 306 | CDD | MPP_PP2A_PP4_PP6 | 6 | 290 | - | - | |
| Blo01g00410 | 306 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 1 | 306 | - | - | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 48 | 75 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 252 | 268 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 230 | 250 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 145 | 171 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 110 | 134 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 174 | 201 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | PRINTS | Serine/threonine phosphatase family signature | 77 | 104 | IPR006186 | GO:0016787 | |
| Blo01g00410 | 306 | Pfam | Calcineurin-like phosphoesterase | 48 | 239 | IPR004843 | GO:0016787 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo01g00410 | Blo16g01139 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g00410 | Blo-Chr1:4641661 | Blo03g01342 | Blo-Chr3:39790004 | 0 | dispersed | |
| Blo01g00410 | Blo-Chr1:4641661 | Blo16g01139 | Blo-Chr16:39895750 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo01g00410 | K04382 | - | rcu:8270352 | 624.394 |