Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00411 ATGAATGGCTGGGATAGGGTCAGGTCGTCGAGGTCGGGATTAGGAAGTGGTAATGCTTCTGTGAATGAAAGGGTTCCTTCGTCTCGGACGGTTCGACTCGGCCGAGTCCAGCCTCAGGCCCCTGGTCATCGGACCATATACTGCCATGATCGCGAGGCTAATCTCGCTGTTAAATTCAAGGGAAATTCAGTTTCAACGACAAAGTACAACTTTTTTACTTTTATACCAAAAGGCCTCTTCGAACAGTTTAGGCGGGTGGCTAACCTCTACTTTCTTACAATCTCAATTTTATCTACAACGCCAATAAGTCCTGTAAGCCCAATAACAAACGTGGTCCCTCTTAGTTTGGTTTTACTTGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAGCGTTTCCAGAATGACATGTCAATAAATAATAATCTAGTGGATGTGTTGCAAGATGAAAAGTGGGAAAGTATCACGTGGAAGAAGCTGCAGGTTGGAGACATTATCAGGGTTAAGCAAGATGGTTTTTTTCCTGCTGATTTACTTTTTCTTGCTGGTACAAACGCAGATGGCATCTGCTATGTAGAGACTGCTAATTTGGATGGTGAGACAAATTTGAAGATCAGGAAGGCATTGGAAAAGACTTGGGATTATTTGACTCCTGATAAAGCATCTGAATTCAAAGGTTGTGAGATACAATGTGAGCAGCCTAATAATTCATTGTACACTTTCACTGGGAATCTTATTTTTCAGAAACAAACTTTACCTCTTAGCCCAAACCAGCTTTTATTGCGAGGATGCAGTTTAAGGAACACTGAATACATTGTTGGGGTTGTTATTTTTACGGGCCATGAGACGAAGGTTATGATGAATGCAATGAATGTTCCTTCTAAAAGAAGTACTTTGGAGAGGAAACTTGACAAACTTATACTAGCACTTTTCGGTACTCTGTTTTTCATGTGTCTGATTGGGGCCATTGGCAGTGGTATATTCATAGATCGCAAGTACTATTACTTAAATCTTGATCAAGGTCGCGAAGATCAATTCAACCCTAACAACCGTTTTGTGGTTGCCATTCTAACTATGTTTACCCTGATTACTCTATACTCAACTATAATTCCCATTTCACTTTATGTTTCTATTGAGATGGTCAAATTCATTCAGTCAACTCAATTTATCAACAAGGACTTAAATATGTACCATGCTGAAAGCAACACCCCTGCACTTGCTAGGACTTCCAATTTAAACGAGGAACTTGGACAGGCAAGCATATTGCCATTTGTTTCCAATGTTGTCCAGGTGGAATACATCTTTTCTGATAAAACTGGAACTCTAACAAGAAACTTAATGGAGTTTTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGTACTGGGGTCACTGAAATAGAAAGAGGAATTGCCCAGCGAAATGGCATGAAAATTGATGAAGAACCAAAATCAGCCAATGCAATTCTTGAGAAAGGCTTTAATTTTGATGACAGTCGAATAATGCGTGGAGCATGGAGAAATGAGCCTAATCCAGATCTATGCAAGGAATTTTTCAGATGCCTTGCTATATGTCATACTGTGCTTCCTGAGGGCGATGACTCCCCAGAAAAGATCACATATCAAGCAGCTTCACCAGATGAGGCTGCTTTGGTAACTGCGGCAAAAAACTTTGGTTTCTTCTTTTACAGGCGGACACCTACCACGATTTATGTTCGTGAAGCTCATGTTGAGAAGATGGGTAAAGTCCAAGATGTGGCTTATGAGATTCTCAATGTCCTTGAGTTCAATAGTACGAGGAAGCGCCAGTCAGTCGTATGCCGATATCCAGATGGCAGGCTTGTCTTGTATTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCTAGTGGAAATGACGACTTAAAGAAACTATCTAGGGAACGCCTGGAACAATTTGGTTCTTCTGGGTTGCGGACTCTTTGCCTTGCTTATAAGAATTTGAGTCCTGATATGTATGAAAGCTGGAATGAAAAATTTATCCAGGCCAAATCGTCTCTACGGGATCGTGAAAAGAAGTTGGATGAGGTGGCGGAACTCATAGAAAAGGATCTTAATTTGATTGGTTGTACTGCCATTGAAGACAAGCTTCAAGAAGGAGTACCAAACTGTATAGAGACACTTTCGAGGGCTGGTATCAAGATTTGGGTGCTCACGGGGGACAAGATCGAGACGGCAATAAATATAGCTTATGCCTGCAATTTAATTAACAATGATATGAAGCAATTTGTCATCAGTTCAGAAACTGATGCGATCAGAGAAGTTGAAAACAGAGGTGACCAAGTAGAAATTGCTCGTTTTATCAGAGAAGAAGTTAAACAACAGCTGAAGAAGTGTCTTGAGGAAGCACAACAATACTTGTACATAACCTCTGGCCCAAAATTAGCACTTGTAATTGACGGGAAGTGTTTGATGTATGCCTTGGATCCAAGTTTGCGAGTGATGCTACTTAATTTGAGCTTGAATTGTAGTTCAGTTGTTTGTTGCCGTGTCTCCCCTCTGCAGAAAGCCCAGGTAACCAGTATGGTGAAGAAAGGTGCGAAGAAAATAACACTTGGTATTGGTGATGGTGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTAGGTGTTGGGATAAGTGGGCAGGAAGGGATGCAAGCGGTGATGGCGAGTGATTTTGCAATTGCCCAGTTTCGGTTTCTTACTGATTTACTACTTGTACATGGACGATGGTCATATCTTAGAATATGCAAGGTCGTAACTTATTTTTTTTACAAGAATCTTACATTCACTATGACTCAATTTTGGTTCACGTTTCAAACTGGATTTTCTGGACAAAGATTTTATGATGATTGGTTTCAGTCATTATATAATGTGATATTTACAGCACTACCTGTAATCATTGTTGGACTTTTTGACAAGGATGTTAGTGCTTCCCTTTCCAAGAAGTATCCAGAGCTCTATGGTGAGGGGATAAGAAATGCTTTTTTCAAATGGAAGGTCGTGGCAATCTGGGCTTTTTTTGCCTTTTACCAATCTCTGGTCTTCTATCACTTTGTGACTGCTTCTAGTAGTGGTGGTCAAAACTCATCTGGCAGAATATTTGGTCTTTGGGATGTTAGCACAATGGCATTCACCTGTGTTGTAGTGACTGTCAACTTGCGTTTGCTTTTGATGTGCAATTCAATTACTCGGTGGCACTATATAAGTGTCGGTGGAAGCGTTCTAGCATGGTTCATATTCATATTCTTATATTCCGGTATTATGACTCCATATGATAGGCAGGAGAATGTGTATTTTGTCATATACGTCTTGATGAGCACTTTCTACTTCTATCTCGCTATTCTTCTCGTTCCTATAGCTGCGCTACTTTGTGACTTTGTTTACCAAGGGATCCAAAGATGGTTTTTCCCCTATGATTATCAGATTGTCCAAGAAATTCACAGACATGAGCCTGATGGTAGAGGCACAGCAGGTCTGCTGGAGATTGATAATCATCTTACAGCAGCTGAGGCAAGAAGCTATGCCATCTCCCAACTTCCAAGAGAAATTTCAAAGCACACAGGCTTTGCTTTTGATTCACCTGGCTATGAATCATTCTTTGCTGCTCAGCTTGGTGTTTATGCGCCACAGAAGGCGTGGGATGTTGCCCGGAGAGCCAGCATGAGGTCTCGGCCTAAGGTTTTGCCAGAGAAGTAA 3720 41.13 MNGWDRVRSSRSGLGSGNASVNERVPSSRTVRLGRVQPQAPGHRTIYCHDREANLAVKFKGNSVSTTKYNFFTFIPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMSINNNLVDVLQDEKWESITWKKLQVGDIIRVKQDGFFPADLLFLAGTNADGICYVETANLDGETNLKIRKALEKTWDYLTPDKASEFKGCEIQCEQPNNSLYTFTGNLIFQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFGTLFFMCLIGAIGSGIFIDRKYYYLNLDQGREDQFNPNNRFVVAILTMFTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLNMYHAESNTPALARTSNLNEELGQASILPFVSNVVQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGIAQRNGMKIDEEPKSANAILEKGFNFDDSRIMRGAWRNEPNPDLCKEFFRCLAICHTVLPEGDDSPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVREAHVEKMGKVQDVAYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLASGNDDLKKLSRERLEQFGSSGLRTLCLAYKNLSPDMYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLNLIGCTAIEDKLQEGVPNCIETLSRAGIKIWVLTGDKIETAINIAYACNLINNDMKQFVISSETDAIREVENRGDQVEIARFIREEVKQQLKKCLEEAQQYLYITSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCSSVVCCRVSPLQKAQVTSMVKKGAKKITLGIGDGANDVSMIQAAHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTMTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYGEGIRNAFFKWKVVAIWAFFAFYQSLVFYHFVTASSSGGQNSSGRIFGLWDVSTMAFTCVVVTVNLRLLLMCNSITRWHYISVGGSVLAWFIFIFLYSGIMTPYDRQENVYFVIYVLMSTFYFYLAILLVPIAALLCDFVYQGIQRWFFPYDYQIVQEIHRHEPDGRGTAGLLEIDNHLTAAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMRSRPKVLPEK 1239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4649255 4660369 - BLOR00411 Blo01g00411 54851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00411 1239 SFLD Haloacid Dehalogenase 426 918 - -
Blo01g00411 1239 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1235 - -
Blo01g00411 1239 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 24 1235 - -
Blo01g00411 1239 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Blo01g00411 1239 SUPERFAMILY HAD-like 693 915 IPR036412 -
Blo01g00411 1239 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Blo01g00411 1239 PRINTS P-type cation-transporting ATPase superfamily signature 435 449 - -
Blo01g00411 1239 MobiDBLite consensus disorder prediction 1 27 - -
Blo01g00411 1239 CDD P-type_ATPase_APLT_Dnf-like 61 1028 - -
Blo01g00411 1239 SFLD p-type atpase 426 918 IPR044492 -
Blo01g00411 1239 Gene3D - 124 290 - -
Blo01g00411 1239 Gene3D - 536 701 IPR023299 GO:0000166
Blo01g00411 1239 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1145 IPR023298 -
Blo01g00411 1239 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 946 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00411 1239 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Blo01g00411 1239 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Blo01g00411 1239 SUPERFAMILY Calcium ATPase, transduction domain A 141 286 IPR008250 -
Blo01g00411 1239 MobiDBLite consensus disorder prediction 1 34 - -
Blo01g00411 1239 Pfam Cation transport ATPase (P-type) 533 627 - -
Blo01g00411 1239 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 441 714 IPR023299 GO:0000166
Blo01g00411 1239 Pfam E1-E2 ATPase 142 378 - -
Blo01g00411 1239 ProSitePatterns E1-E2 ATPases phosphorylation site. 437 443 IPR018303 -
Blo01g00411 1239 Gene3D - 702 907 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00411 Blo-Chr1:4649255 Blo16g00148 Blo-Chr16:3267483 0 dispersed
Blo01g00411 Blo-Chr1:4649255 Blo16g01139 Blo-Chr16:39895750 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00411 K14802 - csv:101207069 2158.64