Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00421 ATGTTGTTTTCTGTTGCCAAAAAAGTCACCGTCATCAGTCACCAAGGTGCAGACGTGGTGCTAAGTCAGCATGACATGATGTTGACGGTTGACATGGTGTTGAGTAAGGATGACGTGGCGTTGATTGGTGATGCGGCATTGACTAATGACGTGTCAGACAAGGGGGATGAGACATTGGTGACTTGTCCTCGGGTTTCGAGCCCCGAAAGTCGAAATGGAGATGAAAAGGTGATGACGCATCTTTGGGTTTCAAGCCCTAGAACCTGGCTAGAGTGTATCAATTTTCTCCTGGATGAGTGGAGGTCCGTCGATCCAAGTCTCTTCATCTCTGGAGTTGCATCATTTTTAGGGAAAAGATCCATGTCGTTTTCTGGAATTGAAATGGGCGAAGAAGCAAACAATGGGGAGGATGATTTGTCGGACGATGGATCGCAAGCAGGAGAGAAGAAGAGGAGGCTAAACATGGAGCAAGTGAAGACTCTGGAGAAGAACTTCGAGATGGGAAATAAGCTCGAGCCAGAGAGAAAAATGCAGTTGGCTCGAGCTCTTAATCTGCAGCCTCGACAGATTGCGATTTGGTTTCAGAACAGAAGAGCTAGGTGGAAGACGAAGCAGTTGGAGAAAGATTATGATCTTCTCAAACGACAGTTCGAATCCATTAAAGCTGATAACGAACTGCTACAGACCCAGAATAAAAAGCTTCAGGCTGAGATATTGGCTCTGAAAAGTAGAGAGCCTACAGAATCCATCAATCTGAACAAAGAAACAGAAGGATCCTCCAGCAACCGGAGCGAGAACAGCTCCGATGTAAAACTGGATATTTCTAGAACACCCGCCATCGATAGCCCTTTATCCAACCATCCAACGAGCCGGCCTTTGTTTCCAGCCGCCATTAGAGCGCCTGGCGTAGCTCAGCTCTTTCAGAACCCATCGAGATCTGAGCTCCATTGCCATAAGATCGATCAGATGGGCAAAGAAGAAAGCCTCAGCAATATGTTTTGCGGGATCGATGATCAGTCCGGCGGGCTGTGGCCGTGGTTGGAGAATCAACATTTTAATTGA 1062 47.18 MLFSVAKKVTVISHQGADVVLSQHDMMLTVDMVLSKDDVALIGDAALTNDVSDKGDETLVTCPRVSSPESRNGDEKVMTHLWVSSPRTWLECINFLLDEWRSVDPSLFISGVASFLGKRSMSFSGIEMGEEANNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFEMGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFESIKADNELLQTQNKKLQAEILALKSREPTESINLNKETEGSSSNRSENSSDVKLDISRTPAIDSPLSNHPTSRPLFPAAIRAPGVAQLFQNPSRSELHCHKIDQMGKEESLSNMFCGIDDQSGGLWPWLENQHFN 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4753880 4764740 - BLOR00421 Blo01g00421 54861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00421 353 SMART HOX_1 147 208 IPR001356 GO:0003677
Blo01g00421 353 MobiDBLite consensus disorder prediction 252 272 - -
Blo01g00421 353 ProSitePatterns 'Homeobox' domain signature. 179 202 IPR017970 GO:0000981|GO:0006355
Blo01g00421 353 Gene3D - 124 205 - -
Blo01g00421 353 MobiDBLite consensus disorder prediction 249 272 - -
Blo01g00421 353 Coils Coil 196 244 - -
Blo01g00421 353 Pfam Homeobox associated leucine zipper 204 244 IPR003106 GO:0006355|GO:0043565
Blo01g00421 353 ProSiteProfiles 'Homeobox' domain profile. 144 204 IPR001356 GO:0003677
Blo01g00421 353 MobiDBLite consensus disorder prediction 129 152 - -
Blo01g00421 353 Pfam Homeodomain 149 202 IPR001356 GO:0003677
Blo01g00421 353 SUPERFAMILY Homeodomain-like 139 206 IPR009057 -
Blo01g00421 353 CDD homeodomain 149 205 IPR001356 GO:0003677
Blo01g00421 353 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 109 353 - -
Blo01g00421 353 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 109 353 IPR045224 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00421 Blo11g00762 CCT
Blo01g00421 Blo11g00762 ECH
Blo01g00421 Blo16g01125 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00421 Blo-Chr1:4753880 Blo06g00068 Blo-Chr6:2376003 7.07E-35 dispersed
Blo07g01368 Blo-Chr7:33810804 Blo01g00421 Blo-Chr1:4753880 1.36E-27 dispersed
Blo01g00421 Blo-Chr1:4753880 Blo11g00762 Blo-Chr11:10558154 2.47E-119 wgd
Blo01g00421 Blo-Chr1:4753880 Blo16g01125 Blo-Chr16:39769985 1.59E-160 wgd
Blo01g00421 Blo-Chr1:4753880 Blo04g00758 Blo-Chr4:7188204 1.82E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11840 PF00046 Homeodomain 4.60E-15 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00421 K09338 - jre:109019228 413.69