Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00424 ATGGCAGACGCCCCGTCAAAACGCCAGAGGGAAAGTACCCAGATGGAAGAAGGCGAAGATGAAGACTGTAAACGTTATAAGTCGTACAACCACATACTCTCCATTCTCGAGGAAGAAGACGATGAGCCAAACGAGGACCTCTCCTCTCTCATTATAACTCTTCAACACGAGCTCACTCCCGAAGACCCCTCTGCAGAACGCAACAGAGAAACCCTTCCCTCCGAATCCAGCTCTGTTTTGGAAGACTATGTCCTCTCTGTCTCTTCTGTTTCTTCTCCTTCGTCTTCAACGGGTTTAAAAGAAGAGGAGGAAGAGGATAGAGGAAGTGTAATGAAGCTTCTGCTCGAAGCCTCCGACGACGAACTGGGTATTCCGAATATTGAGTTCGGTAGCGATGAAGATAAAGCTTTGGAGTTCGATAACGGCGGGAGAGAGAGAGAAACATGTTTTTATTCATGTGATGGTGCTGTGGACATTGTTCGAGGATTAACCGGGTCTGATGATGGTTTGGAGTCTCTTGTCAGCTATGCAGGGATTTTGATACCATCATTATCTGTACTCTTAAGAGCAGAAAAGGATTTTTCAGAACCTGCAGCTGAAGCACTCGTAAATCTTTCACAAAATTCAGATCTTTCTGATAAGATGACAGAGATGGGATTGGTTCAAACTGCTATAGAAATATTATATAAGCCTGAATCTAATATTACTCGGCTTCTAGTAATGCTTTTGGTAAATCTTACTCAGTTGGATGCTGGAATTGCTTCCTTGCTTCAGATTGGAGATGAGAAAATGCAAGGGCTCAATGTTATGAAGCTCGTGAGATCATTTTGTAGATCATTAAGTGAATCTAAAGACGATCCCTTTGAACACGTTGCTTTTATTCTTATAAACATATCGAAGCAAGAAGTGGGAAGAGAACTTCTACTGGACCCCAAACGAGGTCTTTTAAAGCAAATACTTAGACAGTTCGATTCAAATAGTCAGTTGAGGAAGAAAGGGGTATTTGGAACTCTCCGCAACTGTTGTTTCCAAGCCGAGGATCAACTACAGAATTTGCTCTTGATGTCTGAGTTTCTCTGGCCTGCTCTGCTTCTTCCAGTTGCCAGCTATAGGGTTTACACAGAGCAGGACACGTCAAAGATGCCACTTGAGCTTGGAAGTGTGCTTTCAATCGAACGTGAACAAGTTGCTGATCCTGAAATTCGTGTTCAAGCACTAGAGTCTATATACATGATCACTTTGCAGGATGCGGGTCGAAGAGCCCTTTGGTCTATCAATGGGCCGAGGATATTACAAATCGGGTACGAAGACGAAGAAAATCCGAAAGTAATGGAAGCATTCGAGAGGGTTGGCTCTCTGGGAGAGATTTCCAAAGCAGTTATTTGCTTGGAAATTGCTGCTTCGAGGTTAGGGGTATTATTTGATAGACAAGCAGCAATAAAGCTCAGTGGGATGTCAGAAAAGGCGTACAACCGATCCTACAATTTATTGCAGAATGGTCTTGGGGTCAAGAATAAGCTTGATGTTAGGGAGTTGGCGATTCAGTTTGGGTGTGTTAGGCTCATTCCTCTCGTTCAGAAAGGTTTATCTCTTTATAAAGAGCGATTCATCAATTCATTGCCTGCATCTAGGCGGGCAAGTGCTGACTTCACACGACCCGTATTTACTGCTACTGCATTCTATTTATGCGCAAAGAAGCACAAGCTGAAGGTGGATAAATTTAAGTTGATTGAGCTAAGTGGTGCATGTGAATCTGAATTTTCCAGTGTTTTCATTTCTATGAAAGATTTATGCCACGATGTATTTGGAATCTCCAAGGAAAAGAAAGATTCCAGGGATGTAAAAGGAAACAGAGAATTGCTCGATGCATTACCAGGGAAAAGGAAGGTCGAGGATGGTGGATATATTTCAGATGATGGCCCAGAGGTATCCAGATTTAAGCGACGGAAACAAACTGAAGAACATGAGCAGGCCTACAAAGACTGGAAATTCAATGTAATTGAATCCAACAAACAAACCAAGGACAAAGATTTTCCAAGTTTTGATCTCCGAAAAATGGGATTAGAAATATCTGATGAGTTTTTAGGTACTTTTGTACCGATTATTGTGTATTGGGCGTATTCTGGAATTTATGTTCTGCTGGGTTTCTTCGAAAGTTACCGATTGCATTCTAAAACAGACGAGGACGAGAAGAATTTGGTATCCAAACGAACTGTTGTTAAAGGTGTTCTTCTTCAGCAAACCGTCCAAGCTATCGTTGCTATCCTCTTGTTTAAGGTGACCGGAAACGTGGATGAATCTTCTTCGGATCCAAAACCATGGCTAGTTATCTTAGCACAGTTCTTTACAGGAATGCTGGTTTTAGATACTTGGCAGTACTTCATCCACAGATACATGCATCACAACAAGTTTTTATACAAGCACATCCACGCCCAACACCACCGACTTGTCGTGCCCTATGCATTCGGGGCATTATATAATCATCCCTTAGAGGGTCTCCTTCTCGACACAGTTGGTGGGGCCCTATCGTTTCTAATCTCGGGTATGTCCCCTCGAGTCTCCATCTTCTTCTTCTCATTTGCCACCATTAAAACGGTCGACGACCATTGCGGACTATGGCTTCCGGGCAATCCCTTCCATATGTTCTTCAGCAACAATACTGCTTATCATGACGTCCACCATCAACTATATGGAAGTAAGTACAACTTTTCTCAGCCGTTTTTTGTGACTTGGGATAAAATACTCGGGACGTATATGCCTTATTCGTTAGAGAAAAGAACGGGCGGCGGGTTTGAAGCAAAAGCCAAAGATGATTGA 2817 42.74 MADAPSKRQRESTQMEEGEDEDCKRYKSYNHILSILEEEDDEPNEDLSSLIITLQHELTPEDPSAERNRETLPSESSSVLEDYVLSVSSVSSPSSSTGLKEEEEEDRGSVMKLLLEASDDELGIPNIEFGSDEDKALEFDNGGRERETCFYSCDGAVDIVRGLTGSDDGLESLVSYAGILIPSLSVLLRAEKDFSEPAAEALVNLSQNSDLSDKMTEMGLVQTAIEILYKPESNITRLLVMLLVNLTQLDAGIASLLQIGDEKMQGLNVMKLVRSFCRSLSESKDDPFEHVAFILINISKQEVGRELLLDPKRGLLKQILRQFDSNSQLRKKGVFGTLRNCCFQAEDQLQNLLLMSEFLWPALLLPVASYRVYTEQDTSKMPLELGSVLSIEREQVADPEIRVQALESIYMITLQDAGRRALWSINGPRILQIGYEDEENPKVMEAFERVGSLGEISKAVICLEIAASRLGVLFDRQAAIKLSGMSEKAYNRSYNLLQNGLGVKNKLDVRELAIQFGCVRLIPLVQKGLSLYKERFINSLPASRRASADFTRPVFTATAFYLCAKKHKLKVDKFKLIELSGACESEFSSVFISMKDLCHDVFGISKEKKDSRDVKGNRELLDALPGKRKVEDGGYISDDGPEVSRFKRRKQTEEHEQAYKDWKFNVIESNKQTKDKDFPSFDLRKMGLEISDEFLGTFVPIIVYWAYSGIYVLLGFFESYRLHSKTDEDEKNLVSKRTVVKGVLLQQTVQAIVAILLFKVTGNVDESSSDPKPWLVILAQFFTGMLVLDTWQYFIHRYMHHNKFLYKHIHAQHHRLVVPYAFGALYNHPLEGLLLDTVGGALSFLISGMSPRVSIFFFSFATIKTVDDHCGLWLPGNPFHMFFSNNTAYHDVHHQLYGSKYNFSQPFFVTWDKILGTYMPYSLEKRTGGGFEAKAKDD 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4789418 4803612 + BLOR00424 Blo01g00424 54864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00424 938 MobiDBLite consensus disorder prediction 55 78 - -
Blo01g00424 938 Pfam Domain of unknown function (DUF383) 229 402 IPR007205 -
Blo01g00424 938 SUPERFAMILY ARM repeat 190 447 IPR016024 -
Blo01g00424 938 Pfam Domain of unknown function (DUF384) 408 451 IPR007206 -
Blo01g00424 938 Gene3D - 505 601 - -
Blo01g00424 938 CDD Orc6_mid 506 601 - -
Blo01g00424 938 Pfam Origin recognition complex subunit 6 (ORC6) 454 504 IPR008721 GO:0003677|GO:0005664|GO:0006260
Blo01g00424 938 PANTHER STEROL DESATURASE 686 934 - -
Blo01g00424 938 MobiDBLite consensus disorder prediction 1 26 - -
Blo01g00424 938 MobiDBLite consensus disorder prediction 87 106 - -
Blo01g00424 938 Gene3D - 151 449 IPR011989 -
Blo01g00424 938 PANTHER SPHINGANINE C4-MONOOXYGENASE 1-LIKE 686 934 - -
Blo01g00424 938 Pfam Fatty acid hydroxylase 782 917 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00424 Blo-Chr1:4789418 Blo03g00180 Blo-Chr3:4441112 3.49E-14 dispersed
Blo10g00449 Blo-Chr10:8513228 Blo01g00424 Blo-Chr1:4789418 3.66E-148 transposed
Blo01g00424 Blo-Chr1:4789418 Blo11g00767 Blo-Chr11:10864468 3.13E-17 wgd
Blo01g00424 Blo-Chr1:4789418 Blo16g01119 Blo-Chr16:39674990 2.33E-178 wgd
Blo01g00424 Blo-Chr1:4789418 Blo06g00902 Blo-Chr6:32279915 4.14E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00424 - - zju:107428987 458.759