Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00448 ATGGATGATGGAGCAAAGGTTGATCTGGATGATGAGTTCACAAGCGACGCGAGCTGGACTCTGGGAGATGTCACCGATGCCGCTTACGTCTTCTCTGGTGAAAGAGAGAGTAGCATACTCGCCGAATTCGGCTGGAATTTTCCTCCTGCCGATGATGTGAACCGTGTTAGGGAACTAGCTGGACGGTCTACTGACTTCGAAAGGATCTGTACGGATGATTGCTTCGAGTACGCTGCTCACTCCATGCCTCGGCAGGAGAGTCAATGCGAGATGCAGAACTTTGACGCAGCAGTTGCGGCGACATCGGCGTCAGCATCTAACCGTTTTTTATCTTCAAGCTCAAGCGAGGATCGGTCGGAAAAGAGAACGGGATCTGGTGGAAAACAGGCTGAGATACCGAGCAAGGTCCGTAAGAGGGGGCAAAAGCGGATGCGACTACCAAGATTTGCTTTTCTGACCAAGAGCGAGGTCGATAATCTTGAAGATGGGTATAGATGGCGAAAATATGGACAGAAAGCTGTTAAAAACAGTCCGTTTCCAAGCAGGAGTTACTACCGGTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCTTCTATTGTGATAACCACATACGAGGGGCAACATTGCCATCACACTGTAGGATTATCTCGAAGTGGAGTCATGAGACATTCTGCTTCCTTTGATGGTCAGTTTCCTCCTCACTTTCCCCAGTTTTATTACCCTGAAATTCAGCTTCCACCGGAGACTCCACTTAGTGTTCCACAGTTACAGCCGGAGAATCATCCGGCTGGAAGAAATAATGTGATTTCAGAGCCAATTTCACAGCCTATTCCTCATGATCAAGGATTGCTAGGCGACATTGTGCCGAGTGGAGTGCGTAAAAGATGA 912 48.57 MDDGAKVDLDDEFTSDASWTLGDVTDAAYVFSGERESSILAEFGWNFPPADDVNRVRELAGRSTDFERICTDDCFEYAAHSMPRQESQCEMQNFDAAVAATSASASNRFLSSSSSEDRSEKRTGSGGKQAEIPSKVRKRGQKRMRLPRFAFLTKSEVDNLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPSIVITTYEGQHCHHTVGLSRSGVMRHSASFDGQFPPHFPQFYYPEIQLPPETPLSVPQLQPENHPAGRNNVISEPISQPIPHDQGLLGDIVPSGVRKR 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4939080 4941076 + BLOR00448 Blo01g00448 54888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00448 303 MobiDBLite consensus disorder prediction 262 282 - -
Blo01g00448 303 ProSiteProfiles WRKY domain profile. 155 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00448 303 SUPERFAMILY WRKY DNA-binding domain 153 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00448 303 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00448 303 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00448 303 Gene3D WRKY domain 147 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00448 303 MobiDBLite consensus disorder prediction 257 303 - -
Blo01g00448 303 MobiDBLite consensus disorder prediction 109 141 - -
Blo01g00448 303 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 3 232 - -
Blo01g00448 303 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 232 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00448 Blo-Chr1:4939080 Blo02g00473 Blo-Chr2:6768754 4.29E-46 dispersed
Blo11g00612 Blo-Chr11:6117527 Blo01g00448 Blo-Chr1:4939080 1.97E-32 transposed
Blo01g00448 Blo-Chr1:4939080 Blo16g01092 Blo-Chr16:39430665 3.97E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11844 PF03106 WRKY 1.40E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00448 - - jre:108981804 308.145