Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00451 ATGGCTATGCTTTCTCGAAACCGAAACCTATTGAGTTCCTTAAACTTCAACAATGCTTCCCGCTTGAAGACTATCACATCCTTCGCGTTTCTTTCGCAGGAAGCTCAGCTCGCTACTGAACCTCCGCACACATCGTCTGTTCCGCTTCCTCCTAGTCCTTCATCTGGCAGTCCTCTCTACAACGAGAATTGGCGGAGCCCTATTCCTCACTCGTCGTCCACGCAGTCTCTTATTCCGCTCGGATTCCTTAACCAGTCTCCGAACTCTAGAATGCAACCATGGTCGCCGACGCAGGATGTTCAAAGCTTGTTGAATGTCTTCGCTGATTGGATGGCCTCGCAACGATGGGCTGAAATGAAGCAACTTTTTGAATTTTGGATTCGGTCTTTGGACGCCAATGGAAAACCAAATAAACCAGATGTGAACTTGTATAACAATTATTTGAGGGCTAATTTGATGATAGGAGCCTCGACCTGGGAGCTTCTGGATCTGGTATCTCAAATGGAGGACTATGCCATCTCTCCGAACACGGCGTCTTATAATTTGGTGTTGAAGGCTATGTACCAATCTAAGGAGACTGAAGCTGCACAGAAATTGATTGAACGGATGCTGCAGACAGGAGGAGCCTCTATTCCTGATGATGAGTCATATGATTTGATGATTGGAATGCTATTTTCGTCTGATGAGATTGATACTGCATTGAAATATATAGACTTGACTTTAAAATCAGGTTCAATGCTGTCAATGAAGGTATTTACTGAATGTGTGCGGAGCTGTGTAAACAAGGGCAGGCTAGATATGCTGGTTTCCATAATTGATAGGTGCAAGACAACTGTTCAAAATAAAGCTCTGTGTCCAACTTGGAATCTGTGCAATTATATTGCTGAAATTGCAATGCAAGAGGATAATAGCAAGTTAGCATTTCACGCCCTGGAGTTTATGGCCAGATGGATAGCTCGTGGTGAGCTTGAAAGGCCCCCTGTTCATCGTTCTGCAGATGAAGGATTGGTTGTTTCAGCACTTGGAACTGCTTGTAGAACCTACAGTTCTACTCTTATGGATGCATCATGGGCAATCCTAAAACGTTCATTGTGTCAAAAGAAGGCTCCTAATCCAGAATCTTATCTTGGGAAAATACATGCCCTTGCATCGTTTGGTAATCTGCAAAGGGCTTTTAGTACTCTCCATGAATATGAAACTGCCTACGGAAATTCTGATGTAGATAATCAAGAAGAAATGTTCTCTCCATTCACATGTTTGTACCCGTTGGTTTTAGCCTGCTCCAAAAAGGGTTTTGAAACTTTGGACTCTGTCTATTTCCAACTTGAGAACTTAAGCCGGGGAGATCCACCATACAAGTCTGTTACTGCTTTAAATTGCATCATTTTAGGTTGTGCAAATATATGGGACCTTGATCGCGCTTACCAAACTTTTGAGGCCATTGGGTCCACTTTTGGATTGACTGCGAACATTCATTCATATAATGCTCTGATGTATGCATTTGGAAAGCTCAAGAAGACAATTGAAGCTTCTAGGGTTTTTGAACACGCATTGAGTTTGGGGGTTAAACCAAATGCAACCTCTTATTCATTGCTTGTGGATGCTCATCTCATTAACAGAGACCAGAAGTCTGCTCTCTCTGTGATTGATGATTTGTGTTTTTGTAGATTTCTTTCTCTCATCTCTGCTGGCTTTGAGCCATCAAAAGAAACCTTGAAGAAGGTGAGAAGACGATGCATTCGAGAAATGGACTACGATAGTGATGATCGGATCAATTCCATGGCTAAAAAGTTGAATATTCGAATGGGTTCAGACAATCGCAGGGATATGCTGTTCAATCTCGAGTACAGCACGAATTATGTCGCATAG 1869 42.64 MAMLSRNRNLLSSLNFNNASRLKTITSFAFLSQEAQLATEPPHTSSVPLPPSPSSGSPLYNENWRSPIPHSSSTQSLIPLGFLNQSPNSRMQPWSPTQDVQSLLNVFADWMASQRWAEMKQLFEFWIRSLDANGKPNKPDVNLYNNYLRANLMIGASTWELLDLVSQMEDYAISPNTASYNLVLKAMYQSKETEAAQKLIERMLQTGGASIPDDESYDLMIGMLFSSDEIDTALKYIDLTLKSGSMLSMKVFTECVRSCVNKGRLDMLVSIIDRCKTTVQNKALCPTWNLCNYIAEIAMQEDNSKLAFHALEFMARWIARGELERPPVHRSADEGLVVSALGTACRTYSSTLMDASWAILKRSLCQKKAPNPESYLGKIHALASFGNLQRAFSTLHEYETAYGNSDVDNQEEMFSPFTCLYPLVLACSKKGFETLDSVYFQLENLSRGDPPYKSVTALNCIILGCANIWDLDRAYQTFEAIGSTFGLTANIHSYNALMYAFGKLKKTIEASRVFEHALSLGVKPNATSYSLLVDAHLINRDQKSALSVIDDLCFCRFLSLISAGFEPSKETLKKVRRRCIREMDYDSDDRINSMAKKLNIRMGSDNRRDMLFNLEYSTNYVA 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4964685 4968161 - BLOR00451 Blo01g00451 54891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00451 622 MobiDBLite consensus disorder prediction 39 59 - -
Blo01g00451 622 Pfam PPR repeat 179 205 IPR002885 -
Blo01g00451 622 Pfam Pentatricopeptide repeat domain 486 534 IPR002885 -
Blo01g00451 622 Gene3D Tetratricopeptide repeat domain 416 607 IPR011990 GO:0005515
Blo01g00451 622 Gene3D Tetratricopeptide repeat domain 108 325 IPR011990 GO:0005515
Blo01g00451 622 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 210 IPR002885 -
Blo01g00451 622 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Blo01g00451 622 PANTHER OS07G0599000 PROTEIN 1 620 IPR044605 -
Blo01g00451 622 TIGRFAM PPR: pentatricopeptide repeat domain 492 526 IPR002885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00451 Blo-Chr1:4964685 Blo04g00629 Blo-Chr4:5514311 3.01E-10 dispersed
Blo01g00451 Blo-Chr1:4964685 Blo17g00090 Blo-Chr17:691278 8.74E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00451 - - jre:109021632 901.738