Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00452 ATGGGGTGTTATCAGGCATCACCTTCTGTTAACACCCCGTTTCATTTTAGTCTCCCGAAGGTGAAGAGAAGACTGCTCTCCGAAGGATCTCCTCTCCGAATCGATCTCCTCTCCGAAGGCGAAGCGATCTTGTTGCGAGGCGAGCTACCACCCGACGCGAAGCGAGCTGCATCCCAAAGCGAGGCGAGCTCCGACCTCCCACTGCGAACCGAGGCGAGCGTTCTGGATCGACGGACGGTGCGAGGTGACTCGTTCGCTGCGGATCTGGCGCGACATGGCTTCTCGGACCTCTCTGTTCGGACTGCGCGACGAACGACGCGGTTCTGTTCGGTGCACGGCAACGGGCGCAGCACTGTTCTTCGCGGACAGATTCGATCGGCGACGGCGGCTTCGCTGGACAGACACCGTTCGTCACTCTTCGCTGGAGTTGCAGGTCGCGGCTTCGTCGCGGGAGATGCAGCGGCTAGGGCTTCTCTTTGTTTGCTAGAGAAGATGAAGCACGGGCAGCAAGACTTCGGGCAGGAATTCAAGAGTGCAAGAGGGAAGAAGAAGATGGGTGGAGCGAAGGAAGAAGAAGTCAGAACAGAGCTACCACAAGTGGAACTACAACCATGGCAATGGACCAGAAGCACCAAACAACGCCGTTACCGTCTCAGCGAGATAAAAATGGGAGACCCGTCGTTTCGAAAGCTCGACCAGAAACGGAATCTGCCTCTGGAGAAGATCTTTAGCCTTCACAGTGTCTCACCGTCGAACAGAGCCAGTGTATTCTTTCTGCACCCACCCTCTTCTCCGCCCTCTGCAACTCCGATCTGCCCGAGCTCTCCTCCAGTTCAGCCGATTTCGACTCACCACCACTCGCTCCTCCAACCCATTGCCTTCCGACCTAACGCCGCCAGTCTCCGCCACGCTAAGAGAACCAAAGGCAAGGGGGTCAACCGCCGTTATTTCCGAGCGCGTAATCCAGAAAGTGCGACTTACTGTTTATGCATAGATGGGCTGAGCGACTCAGTGCTTCAAACGACAATAGATTACGCCTGTGGAGCTGGAGCTGATTGCTCTCCGATTCTCCAAAACGGAGCTTGTTATTTACCGAACACTGTCGAAGATCACTGCAGCTATGCAGCTAACAGCTATTACCAGCGGATGAGTCAGTCTGGAGCAACCTGCAATTTCTCCGGAACTGCCTATTTAAGCCAAACACCTCCTAGTGACGTAGCCTCTGGTTGTGTTTATCCTTCTAACTCAAGCACTGCTGGATCAACTCCGACTCCACCCCCGTCGACGGGGTCAACTCCGACTCCGCCCTCGTCGACGCCGAACTCAAATACGACATACAACTCGCCACCATACGATATAGGAATAAGCCCCAGCAACGACGGAAATGGAAGCGGGAGAGAGACGATCAGCTTTTTCAACGCAGTCGCCGTTTTAGTATTCTGGTCATTCGGCCGTCTAGCGTGGGGCTGA 1470 55.1 MGCYQASPSVNTPFHFSLPKVKRRLLSEGSPLRIDLLSEGEAILLRGELPPDAKRAASQSEASSDLPLRTEASVLDRRTVRGDSFAADLARHGFSDLSVRTARRTTRFCSVHGNGRSTVLRGQIRSATAASLDRHRSSLFAGVAGRGFVAGDAAARASLCLLEKMKHGQQDFGQEFKSARGKKKMGGAKEEEVRTELPQVELQPWQWTRSTKQRRYRLSEIKMGDPSFRKLDQKRNLPLEKIFSLHSVSPSNRASVFFLHPPSSPPSATPICPSSPPVQPISTHHHSLLQPIAFRPNAASLRHAKRTKGKGVNRRYFRARNPESATYCLCIDGLSDSVLQTTIDYACGAGADCSPILQNGACYLPNTVEDHCSYAANSYYQRMSQSGATCNFSGTAYLSQTPPSDVASGCVYPSNSSTAGSTPTPPPSTGSTPTPPSSTPNSNTTYNSPPYDIGISPSNDGNGSGRETISFFNAVAVLVFWSFGRLAWG 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4968763 4979858 + BLOR00452 Blo01g00452 54892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00452 489 MobiDBLite consensus disorder prediction 415 460 - -
Blo01g00452 489 SMART X8_cls 326 412 IPR012946 -
Blo01g00452 489 Pfam X8 domain 327 396 IPR012946 -
Blo01g00452 489 MobiDBLite consensus disorder prediction 435 460 - -
Blo01g00452 489 Gene3D - 321 420 - -
Blo01g00452 489 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 325 433 - -
Blo01g00452 489 MobiDBLite consensus disorder prediction 172 195 - -
Blo01g00452 489 PANTHER BETA-1,3 GLUCANASE 325 433 IPR044788 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00452 Blo16g01090 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00452 Blo-Chr1:4968763 Blo16g01090 Blo-Chr16:39407009 6.23E-46 dispersed
Blo01g00452 Blo-Chr1:4968763 Blo15g00331 Blo-Chr15:3939889 4.87E-32 wgd
Blo01g00452 Blo-Chr1:4968763 Blo06g01221 Blo-Chr6:35801339 1.61E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00452 - - mesc:110614250 148.673