Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00453 ATGCCTATTAATTATGTTTTCATTGAATTGCCCTATAAATGTGAATTGTTAGAGTTTAAGGATGAAGTTCATGGTCTTAGCAACCTTAGGAAATACCACCTCTTGGGAGTGTCTACTTGTGGTGTAGGTATTCATGATAATATGCTTTATTTAAAAGAGAAGCGGTTGATGAAGAATTTACACGGTCGAGCAACGTGGTTGGCAAAGTTCAAAGCTAAAGTCGATCTAAAGGATTCCGGACGAACAACTCCGGCGACAGCAGCTCCGGATCCGATTCCGGCAAGTAAACAGAACACGATTCTGTTCTGTTTCGGTGCGCCGGCAACTCGGGTGACGTACGGAATCTTCGGATCGTCGTCATTATTCCTGCCTCATAAGGTGTTGTCATCGACGGGTGACCACCTCTTCTATGTTGTGTGGCGGATTGTCGATAAGGAGATGCTTGTCTTGTCTGCTATATTTCTATACATTGGTGGGATGAGACAGCTCAAGTTGATCTTCCTGACTATTCTACTTATCCTATCAACTTTTCGGGAGGCTAGCTCAAATGGTGATCAACCTCTCTCTAAAATTGCTATTCACAAAACCACTCTTGCTTTTCATGAACATGCTTATGTTAAAGCCTCTCCAGCTATTCTTGGTTTTAAGGGGCAAACAACAGAATGGGTGAGTTTGGAGTATAGTTCTCCAAAGCCTTCAATCGATGATTGGATTGGTGTCTTTTCTCCTGCCAACTTCAGTTCTTCGACCTGCACTGCTGAAAACCCAAGAGCATATCCACCCTTCGTGTGTTCTGCTCCTATAAAGTTTCAATATGCAAATTACTCCAGCCCAGATTACAAAGCCACAGGAAAAGGGTATTTGAAGCTTCAGCTGATAAACCAGAGATCAGATTTCTCTTTTGCATTATTTTCTGGTGGTTTATCAAATCCAAAGCTGGTTGCTGTATCAAATCAAGTAGCATTTATGAGTCCCAATGCTCCTCTTTACCCACGTTTAGCACAAGGAAAAACATGGAATGAAATGACTGTAACATGGACAAGTGGATATGACATTGATGAAGCAGAACCTTTTGTTGAATGGAACCTTAAAGGAGAGACTTTCACGCGCTCTCCTGCTGGTACTCTGACTTTTGATCGTAATAGCATGTGTGGTGCACCAGCAAAAACAGTAGGATGGCGTGATCCTGGATACATACACACTGGTTTTCTGAAGGATTTGTGGCCCAACAGACTTTATACATACAAACTAGGACACAGATTGTACAATGGTACATATATTTGGAGTTCAACATATCAATTTAAGGCCTCCCCATATCCTGGTCAAAAATCCTTGCAACGAGTCATCATTTTTGGCGACATGGGAAAGGATAAAGCTGATGGTTCCAATGAATATAACGATTTTCAGCAAGGTTCTCTTAATACTACCAGACAGCTCATTAGGGATTTGAAAAACTACGACATTGTTTTCCATATTGGAGATTTAAGTTATGCGAGTGGATACCTTTCTCAGTGGGACCAATTTCTAGCACAAATTGAACCAATTGCTTCAACAGTACCGTACATGGTTGCTAGTGGGAATCATGAACGTGACTGGCCCGATTCAGGATCCTTCTATAACACCATGGATTCGGGTGGAGAGTGTGGAGTAGTTGCTGAAAGTATGTTCTATGTTCCGGCTGAAAACCGAGCAAAGTTCTGGTACTCCACTGACTATGGGATGTTCCGTTTCTGCGTTGCTGACACAGAACATGACTGGAGGGAGGGAACAGAGCAGTATAAGTTCATCGAACACTGCCTAGCTTCAGTCGATAGAAGAAAGCAACCGTGGCTCATTTTTGTTGCTCATCGGGTACTGGGCTACTCTTCTGGTATTTTTTATGCTCAAGAGGGATCATTTGCTGAACCAATGGGGAGAGACAGTCTTCAAAATCTTTGGCAGAAATATCGCGTCGATCTCGCCTTTTATGGTCATGTGCACAATTACGAGAGGACATGTCCCATATACCAGAATATTTGCACGAACAAGGAGAAACACCATTACAAAGGCGCCCTTAATGGAACAATACACGTGGTGGCGGGTGGCGGGGGAGCCGGACTTACCGAATTTACCACCCTCCAAACAAAATGGAGTATTTCCAAGGACTATGACTTTGGATATGTGAAGCTCACAGCCTTCGATCATTCAAATCTATTATTCGAGTACCAGAAGAGTAGCGACGGAAAAGTTTACGATGCATTCAGAATTTCACGGGATTATCGGGACATTTTGGCCTGCACAGTCGATAGTTGTTCGAGCACGACACTTGCATCCTGA 2316 43.01 MPINYVFIELPYKCELLEFKDEVHGLSNLRKYHLLGVSTCGVGIHDNMLYLKEKRLMKNLHGRATWLAKFKAKVDLKDSGRTTPATAAPDPIPASKQNTILFCFGAPATRVTYGIFGSSSLFLPHKVLSSTGDHLFYVVWRIVDKEMLVLSAIFLYIGGMRQLKLIFLTILLILSTFREASSNGDQPLSKIAIHKTTLAFHEHAYVKASPAILGFKGQTTEWVSLEYSSPKPSIDDWIGVFSPANFSSSTCTAENPRAYPPFVCSAPIKFQYANYSSPDYKATGKGYLKLQLINQRSDFSFALFSGGLSNPKLVAVSNQVAFMSPNAPLYPRLAQGKTWNEMTVTWTSGYDIDEAEPFVEWNLKGETFTRSPAGTLTFDRNSMCGAPAKTVGWRDPGYIHTGFLKDLWPNRLYTYKLGHRLYNGTYIWSSTYQFKASPYPGQKSLQRVIIFGDMGKDKADGSNEYNDFQQGSLNTTRQLIRDLKNYDIVFHIGDLSYASGYLSQWDQFLAQIEPIASTVPYMVASGNHERDWPDSGSFYNTMDSGGECGVVAESMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRRKQPWLIFVAHRVLGYSSGIFYAQEGSFAEPMGRDSLQNLWQKYRVDLAFYGHVHNYERTCPIYQNICTNKEKHHYKGALNGTIHVVAGGGGAGLTEFTTLQTKWSISKDYDFGYVKLTAFDHSNLLFEYQKSSDGKVYDAFRISRDYRDILACTVDSCSSTTLAS 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5009974 5025291 + BLOR00453 Blo01g00453 54893

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00453 771 Gene3D - 442 755 IPR029052 -
Blo01g00453 771 Pfam Calcineurin-like phosphoesterase 447 662 IPR004843 GO:0016787
Blo01g00453 771 PANTHER PURPLE ACID PHOSPHATASE 160 770 - -
Blo01g00453 771 CDD MPP_PAPs 446 751 IPR041792 -
Blo01g00453 771 Gene3D - 327 440 - -
Blo01g00453 771 Pfam Iron/zinc purple acid phosphatase-like protein C 687 745 IPR025733 -
Blo01g00453 771 SUPERFAMILY Purple acid phosphatase, N-terminal domain 305 438 IPR008963 GO:0003993|GO:0046872
Blo01g00453 771 PANTHER PURPLE ACID PHOSPHATASE-RELATED 160 770 - -
Blo01g00453 771 Pfam Purple acid Phosphatase, N-terminal domain 332 435 IPR015914 GO:0003993|GO:0046872
Blo01g00453 771 SUPERFAMILY Metallo-dependent phosphatases 447 762 IPR029052 -
Blo01g00453 771 Pfam Fn3-like domain from Purple Acid Phosphatase 206 323 IPR040974 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00453 K22390 ACP7; acid phosphatase type 7 - pvy:116132270 1075.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00453 Blo-Chr1:5009974 Blo04g01170 Blo-Chr4:20488477 0 dispersed
Blo01g00453 Blo-Chr1:5009974 Blo13g00969 Blo-Chr13:32055292 4.01E-92 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g38 Blo01g00453 . Bda01g02128 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0528 Cone9ag0540 . . . . . . . . . Bpe02g02315 Bma01g00122 . . . . . . . . . Cpe07g00088 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007198 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 4 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00453 Blo_Chr01 FPKM 8.778507 9.252461 8.376851 9.101498 9.056267 9.706115 10.103475 9.439993 8.32432 10.092422