Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00455 ATGGGAAACGGGTTGACGTGTTTCACAGCTGAACGGACAGCTCCGACGAAGAATTTCTTCAAGCGATCAACCTCGCGTTTCGACTTTTCCGAGGATTTGTCCGACTTCTTCACCGGGAAAAATGCTTCGGCCTCTTCCTCCGCCGCGAAAACAAAGGAAAACGGGGATGATTCTTTGAAAATAAACGAAGAGGCTCTCGTTGCCGCTATACTTCTGGCGGAGCAGCAGCTGCGAAATTTTCCCCAATTCAATCGCTCTGCCTCCGTCGCTTATCCACCGCTACCGCCGAAGAAGCAGAGGTTTCCGAGGAGTTCGAGCGCTAAGCAACAACCAAACTCCGACCCTGTGATTCCAACTCGTCGTTTTCCTCGTCAGGATGGGAAGATGGATGGCTTAGAAACCAGACATTTTGTTCTCGTCCATGGCGGAGGGTATGGAGCATGGTGTTGGTACAAAACGATGACGCTTTTGGAAGAAAGTGGATATACAGTTGATGCAGTTGACCTAACAGGCTCTGGAGTTCATCCTTCTAACTCCAGTTCCATCACTTCTCTTGCGCACTATGCAGACCCTCTCACTCGTCTTCTTCGCCAATTAAACGACGAAGATAAGGTGATTCTGGTGGGTCATGATTTTGGGGGAGCTTGTATTTCATATGCAATGGAGATGTTTCCAAGTAAAATCTCAAAGGCCATATTCATTGCTGCTACAATGTTGACAAATGGGCAGTCTGCTCTCCACTTATTCTCCAAACAGCACCCTATAACATCCCAATCTTATAGATTCAAACGTTACAATTGGCATCATAATCTACTTATAAATGCAGCCGAGCAGTTGTTTGGTGTAACGTCCTTTAGTGTTCATAGTACAATATTATCTGCTTTGAGCAGAATTACGCACGATTTTGTTATTGGGGTTAGCCCAAAACGCATTGAATTAGGGAGAGAGAGGAACCATACTTATAAACCATGTGTTTTCTACTATCTTAAAAGATATGAGATTATGTACCCCCACTGTTATGGCTCGGACCCTTACATGGGTCATCTTAATCTTCACAGGGCAGACTGTCACATTAAACCTTCCAAGTCCCAAGAGTTGGGAGGAAAGAGGGTAATTGTGGTGATTCATTTTTACGAGGGTTTAGCAGAAATGACTGATGTGATGCAAAAAGCTCAGGTATTTGTGCATGCAAATGGGAAGGATCAACCTCCGACAGCCATAAACCTCGACAAAGCACTCTTAAAAGACTTGCTATTCGGTCGAAGTCCGGCCAAGGACGTTGCTTTAGCAACTGTATCGATGAGGCCAATCCCTTTTCCGCCATTGATGGAGAAGCTGAGTGTTTCAGAAGAAAGGTATGGCTGCGTGAAGAGATTCTACGTAGGAACTGAAGACGACTATGCAATTTCTGCTTCCACCCAAGAAGCCATGATCAACTCAAACCCTCCCCACAAGGTATTCTTCGAATCTCTCACCCTAGCCCTAGATCCCCTTCTATCGGCTGAGATCTTGGGTTACTCATTTGGAAAATCTGAGAGCATGGGTCGTGGAGTTAGTAGTGGCGGAGGACAGAGTTCATTGGGTTATCTCTTTGGGAGTGGAGAGTCTCCAAAACAAGCCACACCTTGCCCTCAACTATCTCCAAGTGAAGGGCAAAGTGCAAATAACGGAGCTACACCAAAATCTGTCAATCCGCCAGCTCCACCAGTTGATAATGCAAAGCAAATCCCTGCTGGTATCCATAGTACCTCAACAAACAACTATTTGAGGGCTGATGGTCAGAATACTGGCAACTTCATCACGGATCGGCCGTCAACCAAGGTCCACGCAGCCCCAGGTGGTGGATCTTCCCTGGGTTACCTGTTTGGTAATGGTCCCGGAGGACCTGAAAAATGA 1896 46.36 MGNGLTCFTAERTAPTKNFFKRSTSRFDFSEDLSDFFTGKNASASSSAAKTKENGDDSLKINEEALVAAILLAEQQLRNFPQFNRSASVAYPPLPPKKQRFPRSSSAKQQPNSDPVIPTRRFPRQDGKMDGLETRHFVLVHGGGYGAWCWYKTMTLLEESGYTVDAVDLTGSGVHPSNSSSITSLAHYADPLTRLLRQLNDEDKVILVGHDFGGACISYAMEMFPSKISKAIFIAATMLTNGQSALHLFSKQHPITSQSYRFKRYNWHHNLLINAAEQLFGVTSFSVHSTILSALSRITHDFVIGVSPKRIELGRERNHTYKPCVFYYLKRYEIMYPHCYGSDPYMGHLNLHRADCHIKPSKSQELGGKRVIVVIHFYEGLAEMTDVMQKAQVFVHANGKDQPPTAINLDKALLKDLLFGRSPAKDVALATVSMRPIPFPPLMEKLSVSEERYGCVKRFYVGTEDDYAISASTQEAMINSNPPHKVFFESLTLALDPLLSAEILGYSFGKSESMGRGVSSGGGQSSLGYLFGSGESPKQATPCPQLSPSEGQSANNGATPKSVNPPAPPVDNAKQIPAGIHSTSTNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGNGPGGPEK 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5053461 5059967 + BLOR00455 Blo01g00455 54895

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00455 631 MobiDBLite consensus disorder prediction 577 603 - -
Blo01g00455 631 MobiDBLite consensus disorder prediction 528 561 - -
Blo01g00455 631 PANTHER METHYLESTERASE 15, CHLOROPLASTIC-RELATED 382 487 - -
Blo01g00455 631 PANTHER METHYLESTERASE FAMILY MEMBER 382 487 IPR045889 -
Blo01g00455 631 MobiDBLite consensus disorder prediction 88 128 - -
Blo01g00455 631 MobiDBLite consensus disorder prediction 102 116 - -
Blo01g00455 631 Pfam alpha/beta hydrolase fold 136 313 IPR000073 -
Blo01g00455 631 Gene3D alpha/beta hydrolase 131 296 IPR029058 -
Blo01g00455 631 Gene3D alpha/beta hydrolase 365 491 IPR029058 -
Blo01g00455 631 SUPERFAMILY alpha/beta-Hydrolases 135 254 IPR029058 -
Blo01g00455 631 PANTHER METHYLESTERASE 15, CHLOROPLASTIC-RELATED 48 253 - -
Blo01g00455 631 PANTHER METHYLESTERASE FAMILY MEMBER 48 253 IPR045889 -
Blo01g00455 631 MobiDBLite consensus disorder prediction 528 631 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00455 - - - fve:101307581 249.21
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00455 Blo16g01083 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00455 Blo-Chr1:5053461 Blo01g01291 Blo-Chr1:49571786 3.68E-14 dispersed
Blo01g00455 Blo-Chr1:5053461 Blo11g00549 Blo-Chr11:5147882 2.46E-33 wgd
Blo01g00455 Blo-Chr1:5053461 Blo16g01083 Blo-Chr16:39372010 9.17E-40 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g28 Blo01g00455 Blo16g01083 Bda01g02124 Bda11g01173 Bpe13g01371 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0523 Cone9ag0536 . . . . . . . Bda11g01173 . Bpe02g02313 Bma01g00125 . . . . . . . . . Cpe07g00090 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002680 1 2 2 2 0 2 3 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 4 2 57
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00455 Blo_Chr01 FPKM 101.219215 106.757561 68.725433 67.18026 68.827682 78.657204 62.897552 71.928017 71.901627 69.141182