Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00460 ATGGCGGAAGGTTCAGTCAAACCGACGCCCCTTCTGAAAGATGAGCTTGATATCGTGATCCCCACGATTAGAAACCTGGATTTCTTAGAGATGTGGAGGCCATTTTTTCAGCCGTACCATCTCATAATCGTTCAGGACGGCGACCCTTCGAAAATTATCAAGGTTCCTGATGGCTTCGACTACGAGCTCTACAATCGAAACGACATCAATCGGATTTTGGGTCCCAAGGCATCGTGCATTTCTTTCAAAGACTCTGCTTGTCGCTGCTTCGGCTACATGGTTTCTAAGAAGAAGTATATCTACACTATTGACGATGATTGCTTTGTCGCCAAAGATCCAACTGGGAAGGATATCAATGCACTTGAGCAGCACATAAAGAACCTCTTATGTCCATCCACTCCGTTTTTCTTCAACACTCTTTACGATCCATATCGAGAGGGTGCAGACTTTGTTCGTGGATATCCTTTCAGTCTTCGCGAGGGTGCTCCAACTGCTGTTTCTCACGGACTTTGGCTGAACATCCCTGATTACGACGCCCCCACTCAACTTGTCAAACCTCGAGAGAGGAACACGAGGTTTGTTGATGCCGTCTTAACAATTCCCAAGGGAGCTTTATTCCCCATGTGTGGAATGAATCTGGCTTTCGATCGAGAGCTTATTGGACCGGCTATGTACTTTGGACTCATGGGCGACGGTCAGCCGATTGGGCGATACGACGATATGTGGGCTGGCTGGTGTGTGAAGGTTATATGTGACCATCTGAGGTTGGGGGTGAAGACGGGTTTGCCGTACATATGGCACAGCAAAGCAAGCAATCCATTTGTGAACCTCAAGAAGGAATACAAGGGAATCTTCTGGCAAGAAGAAATCATTCCATTTTTTCAATCTGCAAGTCTGTCAGAAGATTGCACTACAGTTCAAAAATGCTATCTTGAACTGTCAAAACAAGTGAGGGAGAAGCTTGGGAAGGTTGATCCTTACTTCGTCAAGCTAGCAGATGCCATGATTACTTGGATTGAAGCTTGGGATGAGCTCAACGGCAACAGCTCTTCTGCAGAGAAATCTGCAAAACCACTCTCTGGCCCTGCGAAGTAA 1095 46.58 MAEGSVKPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGKDINALEQHIKNLLCPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPRERNTRFVDAVLTIPKGALFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLRLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSASLSEDCTTVQKCYLELSKQVREKLGKVDPYFVKLADAMITWIEAWDELNGNSSSAEKSAKPLSGPAK 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5081350 5083767 + BLOR00460 Blo01g00460 54900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00460 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 224 IPR029044 -
Blo01g00460 364 PANTHER UDP-ARABINOSE MUTASE 3 354 IPR037595 -
Blo01g00460 364 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Blo01g00460 364 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 354 - -
Blo01g00460 364 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00460 Blo-Chr1:5081350 Blo17g00395 Blo-Chr17:4423007 0 dispersed
Blo04g00799 Blo-Chr4:8068940 Blo01g00460 Blo-Chr1:5081350 0 transposed
Blo01g00460 Blo-Chr1:5081350 Blo16g01077 Blo-Chr16:39316949 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00460 K13379 - qsu:112009791 695.656