Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00462 ATGGCTAAGACATCCAACCATCAGACCTCGCAGGGTAAAACTGAGAACAATAAGAAGAAGAAGCAGAAGAAGAAGAGTAAGTCAGTCCCAAACGCCATGCCTATGAAGCTCAAAGCTCCACAGGCCAATCCTTTCGAAAGCATTTGGTCGCGCAGAAAATTTGACACACTTGGAAAAAAATCCAAGGGAGAAGAGCGGCGCATGGGCCGAAGGAAGAAAACGCTGTTGAAGGAGTATCAGCAAAGTGGAAAAGCTTCAGTTTTTATAGATAAGAGAATTGGGGAACACAATGAAACTCTGGAAGAATTTGACAAAGCCCTTCTGCGTTCCCAGCGACAAATGAAATTGAGCAAGAAAAGCAAATATAACTTGTCTGATGGAGAGGAAGATGAAGATTCGGGATTTCTAAGTCTTGGTGCATTGACCGAAAGAGATAGTTTTGATGACGAAATTCTAACCAATGATGACGAAGTTCTAGCGGATGATGACGATGATAACGCAGGCGCTGATATGAGCAAGAAGGATTTGCGTTTACCGAAGGAAAGAGGTGTTATGGAAGGAGAGGAAAAGAGACACAAAAGCAAGAAAGAAGTGATGGCAGAGATCATTGCAAAGAGCAAATTTTTTAAGGCCGAGAAAGCAAAAGCTAAGGAAGAAAATGAGCGTTTTGTTGAGGAATTGGACCAAAAATTTGCATCCATTCAATCTGATGCCTGGGCATCTTTTACTAATCCAGCCAACGTGAATGCTTTGAAGACATTAGTGAACAAGAGTATTCCAACAAATGATCAAATGAAGAAGGATGACTTCACAGGTCATGGAGATAAATCAAAAGAAGTTGACCAGGATAAACCTGATTCTTATGACAAACTATTAAAAGAAATGGCATTGGAAATGCGTGCTCGTCCTTCCGATAGAATAAAAACACCAGAGGAGGTTGCCCAAGAGGAGCGAGAACGATTGGAGCAACTAGAGGAAGAGCGGCAGAAGAGAATGCATGGTGATGATGAATTCACTGATGAGGAAAATGAAGAAGCTGATAAATCATATGCACTGAAGCCGAGACCTATCTCTGGGGATGATTTGGGAGATTCATTCACTGTTGATGAAGAACCCAGTAGTAAAAAGGGTTGGGTTGATAAGATTCTCGGGCGAAACGATGATGAAGATGATGATTCTTCTGGAAATTCAGATTACGATGATGATCATGACGCTGATGAAAGAACTGGTGAAGATGCTGGTGACGGAGAATCAAATGAAGGAGAAACGGATGAAGATGATGGTGATGAAGGTTCTGAGGAAGAGCAAGATGAGCATAAAATCGCTTTGAAGGACTGGGAACAGAGTGATGATGATATTATGGAGACAAATCTAGAAGCAGATGAAGAAGAAAGTAAAGAAAAAGAACTTCGTGTAAACAGAGTTGGTAAAGGTAAAGAGTGCAATGATGTTGCTAGTATTAGTAAAACTTATCCAAGCCACGCAGAAGCAAAGAAATTTGATGTGAATGCCAAACGTCCTCAACGCTTTGAAATTCCATATATCATTGAGGCTCCAAAAAGATTGGAAGAATTTTCATCCCTGCTAAATAATTGTTCCAGTACTGACACAATCTTGATAATCGATCGAATTCGTGCAACAAATGCAATCAAGTTGGCCTCCGAAAATCTAAAGAAAATGCAAGTTTTCTACGGTGTCCTCTTGCAGTATTTTGCTGTTTTATCAAGTAAAAAGCCACTAAAGATAGAGTTATTAAATTTGCTAGTGAAACCATTGATGGAGATCAGTGTCGAGATTCCATATTTTGCTTCAATTTGTGCTCGCCAGAGGTTGTTGCACATTCGAACTCAATTTTGTGAGATTGTTAAGGATCCAAAAAAAAGTGCATGGCCTACATCAAAAACGTTGATCCTCTTGAGGCTTTGGGCAATGATATTTCCATGCTCTGACTTTCGTCATGCAGTAATGACCCCAGCAATATTGTTGATGTGTGAATATCTGATGCGCTGTCCCATTGTTTCTGGCCGAGATGTTGCAATCGGGTCTTTCCTGTGTTCCATGCTTCTATCCGTGACTAAACAATCTTTGAAGTTCTCTCCTGAACCCATAGTCTTCATCCAAAATTGCCTGATGGCGGTTGTGGGTAGAAAATCAACTCAAAGTCGTCAGTTTTATCATCTAGTGGAGTCAAAAGAAGTGGAGTCACTACTGCACCTACAAAATTGCGCAAGTGAAAGTAAACCTCTGAACTTCTTCGCTATAATGGACATGCCTGAGGACTCTTCCTTCTTCAGCTCTGACAATTTCAGGGCTGGTCTATTGATGACGATTATTGAAAACCTTCTTGGATATGTTAATATCTATGACAAAATTAGTTCCTTTCCCGAGATTTTCTCGCCTATTTCGTCACTGCTGCTTGAAATGGCATCTCAGGCAAACTTGCCAGATGCATTGCGGGATAAAGTCAGAAATGCGGAGCAACTTATTAAGGCTAAGGTAGATGAACATCAAACGATTAGGCGGCCACTTCAAACGCGGAAAAAGAAGCCTGTGCCAATCAAATTACTTAATCCTAAATTCGAGACCGATTTTGTCAGGGGTAGAGATTATGATCCGGATCATGACCGGGTGGTGGCGAGAAAGATGAAGAAACTCATAAAACAGGAAGCGAAAGGGGCAGCCCGTGAATTACGAAAAGACAACCATTTCTTGTTTGAGGTAAAGGAGAAGGAGAAGGCAGCGTTGGAAGAAGAAAGGGTGGAAAGGTATGGAAAAGCAAGGGCCTTCCTTCAAGAGCAAGAGCACGCCTTCAAATCTGGGCAATTGGGAAAAGGCAAGAAGAGAAGGAGGTGA 2853 41.4 MAKTSNHQTSQGKTENNKKKKQKKKSKSVPNAMPMKLKAPQANPFESIWSRRKFDTLGKKSKGEERRMGRRKKTLLKEYQQSGKASVFIDKRIGEHNETLEEFDKALLRSQRQMKLSKKSKYNLSDGEEDEDSGFLSLGALTERDSFDDEILTNDDEVLADDDDDNAGADMSKKDLRLPKERGVMEGEEKRHKSKKEVMAEIIAKSKFFKAEKAKAKEENERFVEELDQKFASIQSDAWASFTNPANVNALKTLVNKSIPTNDQMKKDDFTGHGDKSKEVDQDKPDSYDKLLKEMALEMRARPSDRIKTPEEVAQEERERLEQLEEERQKRMHGDDEFTDEENEEADKSYALKPRPISGDDLGDSFTVDEEPSSKKGWVDKILGRNDDEDDDSSGNSDYDDDHDADERTGEDAGDGESNEGETDEDDGDEGSEEEQDEHKIALKDWEQSDDDIMETNLEADEEESKEKELRVNRVGKGKECNDVASISKTYPSHAEAKKFDVNAKRPQRFEIPYIIEAPKRLEEFSSLLNNCSSTDTILIIDRIRATNAIKLASENLKKMQVFYGVLLQYFAVLSSKKPLKIELLNLLVKPLMEISVEIPYFASICARQRLLHIRTQFCEIVKDPKKSAWPTSKTLILLRLWAMIFPCSDFRHAVMTPAILLMCEYLMRCPIVSGRDVAIGSFLCSMLLSVTKQSLKFSPEPIVFIQNCLMAVVGRKSTQSRQFYHLVESKEVESLLHLQNCASESKPLNFFAIMDMPEDSSFFSSDNFRAGLLMTIIENLLGYVNIYDKISSFPEIFSPISSLLLEMASQANLPDALRDKVRNAEQLIKAKVDEHQTIRRPLQTRKKKPVPIKLLNPKFETDFVRGRDYDPDHDRVVARKMKKLIKQEAKGAARELRKDNHFLFEVKEKEKAALEEERVERYGKARAFLQEQEHAFKSGQLGKGKKRRR 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5108512 5114287 + BLOR00462 Blo01g00462 54902

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00462 950 Coils Coil 206 226 - -
Blo01g00462 950 Pfam Nop14-like family 41 935 IPR007276 GO:0032040
Blo01g00462 950 MobiDBLite consensus disorder prediction 368 390 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 166 196 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 435 450 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 416 434 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 391 408 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 262 337 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 1 77 - -
Blo01g00462 950 Coils Coil 453 473 - -
Blo01g00462 950 PANTHER NOP14 18 950 IPR007276 GO:0032040
Blo01g00462 950 MobiDBLite consensus disorder prediction 147 196 - -
Blo01g00462 950 Coils Coil 307 334 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 52 77 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 112 135 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 149 165 - -
Blo01g00462 950 MobiDBLite consensus disorder prediction 255 450 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00462 K14766 NOP14, UTP2; nucleolar protein 14 - zju:107429082 1007.67
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00462 Blo11g00801 CCT
Blo01g00462 Blo06g00939 CCT
Blo01g00462 Blo11g00801 ECH
Blo01g00462 Blo06g00939 ECH
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g2 Blo01g00462 . . . . Bpe10g00911 Bma14g01718 . Cmo04g01798 Cmo18g01113 . Cma18g01089 . Car18g01010 . Cpe09g00233 Cpe01g01517 . . . . . . . . . . . . . . Cone13ag0891 Cone19ag0890 Cone6ag0514 Cone9ag0526 . Csa05g02523 . . Blo06g00939 Blo11g00801 . . . . . . . . . Cma04g01711 . Car04g01745 . . Cpe07g00095 . . . . . . . . . . . . . . . . . .
Vvi1g5 Blo01g00462 . Bda01g02118 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0893 . . . . . . . . . . . . Bpe02g02306 Bma01g00132 . . . . . . . . . Cpe07g00094 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008534 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00462 Blo_Chr01 FPKM 9.391617 9.810371 8.475727 8.633318 8.452026 8.084148 7.616137 7.557322 8.400067 8.863955