Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00464 ATGAGAGCAGGGAAATCGAATCAGGAAGAAGAAGAGTTTGAGGAGGAAGACTTCATTTCCAAAAAAGAAGGCCATTCTTCGACTTCTATTGCTAACATTAATAGCAACATCAAAGATGCTAAGAACAACGATAAGGCTAATGCAATACGGTCCAAGCATTCTGTTACAGAGCAGCGGAGACGAAGCAAGATCAACGAGAGGTTCCAGATGTTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGATACAGCATCTTTCCTACTGGAGGTGATTGAGTATGTTCAGTATTTACAAGACAAGGTGCAAAAATTTGAGGGTTCATACCCGATCTGGAATGGAGAGCCTTCCAAATTAATGCCATGGAGAAATAGTCATTGGCGGGTCCAGAGTTTTGCCGGTCAATCACCTACCGGAAACAACGGTTCATTCCCTGGATTAGCATTTCTGGGTAAAGTTGATGATAATAATATTCCGGTCACCCAGAACCTGGAAGATTCCATCGCAAACAGAGGCGTAGGTGATATTTCAAGTATAGATGCCTCTTTGCAAGTTCCTATGCAGGCGAATGTCCTCCCCCTCCCGTCTTCTGTCCGAAGCGATGGAATGGCTGCTCAACCTCTTCAAATGCCGGCTTCTGATGCGCCCTGTACTGAGTGTCTAGTCACATCTGAGCCGTTAAACCAGCCGGAGGAGGCGAATATCGAAGGCGGAACTATCAGAATTTCAAGTCCTTACTCGGAGGGGTTGCTGAATAAGTTGACACAAGCCCTCCAGGATGCTGGGGTGGATCTATCTCGGGCCAGTATCGCCATTCAGATCGATATTGGAAAGAAAGAAAACAGAGCACCACCTCCCGAAACATCCATTTTTAATGTATTGCTTTCAGAGTAA 894 45.41 MRAGKSNQEEEEFEEEDFISKKEGHSSTSIANINSNIKDAKNNDKANAIRSKHSVTEQRRRSKINERFQMLRDLIPHSDQKRDTASFLLEVIEYVQYLQDKVQKFEGSYPIWNGEPSKLMPWRNSHWRVQSFAGQSPTGNNGSFPGLAFLGKVDDNNIPVTQNLEDSIANRGVGDISSIDASLQVPMQANVLPLPSSVRSDGMAAQPLQMPASDAPCTECLVTSEPLNQPEEANIEGGTIRISSPYSEGLLNKLTQALQDAGVDLSRASIAIQIDIGKKENRAPPPETSIFNVLLSE 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5121398 5123005 - BLOR00464 Blo01g00464 54904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00464 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 119 IPR036638 GO:0046983
Blo01g00464 297 MobiDBLite consensus disorder prediction 43 61 - -
Blo01g00464 297 Gene3D - 46 110 IPR036638 GO:0046983
Blo01g00464 297 SMART finulus 54 104 IPR011598 GO:0046983
Blo01g00464 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Blo01g00464 297 MobiDBLite consensus disorder prediction 1 27 - -
Blo01g00464 297 CDD bHLH_AtBIM_like 47 123 - -
Blo01g00464 297 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 290 IPR044295 GO:0003700|GO:0006351|GO:0046983
Blo01g00464 297 MobiDBLite consensus disorder prediction 39 61 - -
Blo01g00464 297 PANTHER TRANSCRIPTION FACTOR BIM2 1 290 - -
Blo01g00464 297 Pfam Helix-loop-helix DNA-binding domain 50 99 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00464 Blo-Chr1:5121398 Blo10g00900 Blo-Chr10:27960491 1.20E-08 dispersed
Blo16g01081 Blo-Chr16:39364982 Blo01g00464 Blo-Chr1:5121398 3.51E-131 transposed
Blo01g00464 Blo-Chr1:5121398 Blo15g00347 Blo-Chr15:4381286 1.86E-52 wgd
Blo01g00464 Blo-Chr1:5121398 Blo06g01201 Blo-Chr6:35547454 1.79E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11846 PF00010 HLH 2.30E-13 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00464 - - csv:101217750 323.553