Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00466 ATGGATTTCGGTGGGAAGGACGATTATGAACTGGAAAACAGGACTGAAAATTCTGTCGACTGTTCTCCAAGTATGTCCTCTGGCTGGCGATTTGGTGGAGCCCAGCTCTTGAAAACGTCGACGATGGGGTTGGTTAACCCTGCAAATTCCTCTGGGAAAGAGGATCTTATTTTTCCTTCTTGTTCATCTGCTTCGATGGTGGATTCTTTTGGTCCAAACTTCAATGGTGGATTTTTTGATCTCTACAACCACGTTAGTTCTTCAAACCCGGTTGGAATTAGCAGGGAAAGTGCAGGTTCTTTGAGAAGAACTTCTGATAGAACTCTCGATATGAGTTGGAACCCACCAAATCAGACGAGAGGAAGTAATTTACCGGTTTCTATTCACCCGAGCTTACCACAATTTCCAGCTGATTCTGCATTCATCGAGCGGGCAGCTAGATTATCCTGCTTCAATGGTGGGAATCTTATGGAGATAGCTAGTCCTTTCGGTATTCCTCAATCCATGGCTCTTTATTCTCGGAGTTTGGGGACGAATCCGGGCAATCAAGAAATTAACTCCATTGACGGGATGAGATCAGCTACTGTGGGGCAACCTCAAAGACATCAGATTAGTGATATAGGAGAAGCATCCACCATGGATGTTTGTTTGGAGCATGGAACTGAGAATCCTGAGAATGATGGAAAAATTGAGAACCTTCTCAGATCTCACAATGAAGAAAAACACACTATCAGCAGGTCAGGCGGTGAAGCGGAAGACGAAATGAGTGGTGGTGCTCAAGATGAACCATCGACAGCGGACGGTAGAGAAGAAGAACCTTCCGGCAAGGGAACGGGACCCAAAAAAAGGAAGAGGGTTAGGCAGAACACTGCACCTGATCAAGCCAAAGATGGCGAATTTGCGAAGGACGACAATGAGATTGATCGGAGGGACGATCAAAACGCATATCCAATTGCCAACAAATCTACTGGAAAACATAGTAAACAGGGATCTCAAGCATCCGATCCGCCAAAGGAAGAATATATTCACGTTAGAGCACGAAGAGGCCAGGCGACAAACAGCCATAGTCTTGCCGAAAGGGTTAGAAGGGAGAAGATCAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCGGGTTGCAGCAAGGTCACCGGCAAGGCGGTGATGCTGGACGAAATAATAAATTACGTGCAATCGCTGCAACGACAAGTAGAATTTTTGTCGATGAAACTCGCCACTGTCAATCCGAGGATGGATTTCAATATCGACGGGCTTGCGAAAGATATTCTTCAAGCAAGGGGTGGTTCATCGTCTTCATTGGGCTATTCTCCAGACATATCTATGGCTTATCCTCCATTACAACCCTCGGGTGTCCACTGCATGGGGAGCTCTTCCCAGATTGTCCGGAGAACGCTTTCTTCCCACTTGATGACTGCCATGACCGGAGGGTTTAAGGAGCCGTCTCAGCTACCAAATGTGTGGGAGGACGAGCTCCACAATGTTTTCCAGATGAGCTATGCAACTGCTGCTCCTTCCAATAGCCTAAATCCTGATGAATCTTCTTCTAAACCATTTCCAGACCAAAACTGGCAAGAACACAGTCAAATCCACTTGAAAACAGACGCGATAATGAGAAAAAAGCAGGATTTGGAACTCAAAAGAGATGAATTATGTAACTAA 1680 45.65 MDFGGKDDYELENRTENSVDCSPSMSSGWRFGGAQLLKTSTMGLVNPANSSGKEDLIFPSCSSASMVDSFGPNFNGGFFDLYNHVSSSNPVGISRESAGSLRRTSDRTLDMSWNPPNQTRGSNLPVSIHPSLPQFPADSAFIERAARLSCFNGGNLMEIASPFGIPQSMALYSRSLGTNPGNQEINSIDGMRSATVGQPQRHQISDIGEASTMDVCLEHGTENPENDGKIENLLRSHNEEKHTISRSGGEAEDEMSGGAQDEPSTADGREEEPSGKGTGPKKRKRVRQNTAPDQAKDGEFAKDDNEIDRRDDQNAYPIANKSTGKHSKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIDGLAKDILQARGGSSSSLGYSPDISMAYPPLQPSGVHCMGSSSQIVRRTLSSHLMTAMTGGFKEPSQLPNVWEDELHNVFQMSYATAAPSNSLNPDESSSKPFPDQNWQEHSQIHLKTDAIMRKKQDLELKRDELCN 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5141924 5144623 - BLOR00466 Blo01g00466 54906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00466 559 Gene3D - 347 419 IPR036638 GO:0046983
Blo01g00466 559 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 419 IPR036638 GO:0046983
Blo01g00466 559 MobiDBLite consensus disorder prediction 241 338 - -
Blo01g00466 559 MobiDBLite consensus disorder prediction 510 531 - -
Blo01g00466 559 PANTHER TRANSCRIPTION FACTOR BHLH49 44 521 - -
Blo01g00466 559 MobiDBLite consensus disorder prediction 286 315 - -
Blo01g00466 559 Pfam Helix-loop-helix DNA-binding domain 353 401 IPR011598 GO:0046983
Blo01g00466 559 MobiDBLite consensus disorder prediction 264 279 - -
Blo01g00466 559 MobiDBLite consensus disorder prediction 316 331 - -
Blo01g00466 559 CDD bHLH_AtBPE_like 340 425 - -
Blo01g00466 559 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 350 400 IPR011598 GO:0046983
Blo01g00466 559 MobiDBLite consensus disorder prediction 92 124 - -
Blo01g00466 559 SMART finulus 356 406 IPR011598 GO:0046983
Blo01g00466 559 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 44 521 IPR024097 GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00466 Blo16g01072 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00466 Blo-Chr1:5141924 Blo07g00067 Blo-Chr7:975466 4.66E-66 dispersed
Blo01g00466 Blo-Chr1:5141924 Blo16g01072 Blo-Chr16:39276599 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11847 PF00010 HLH 7.30E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00466 - - zju:107429134 547.74