Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00473 ATGTCGTCATCTCGTATTCTACCCGTAACCCACCATCCTTCTTCTTCCTATTCGCCATTAGAGTCTGGAATTCCTTCGACAATGCCTCCTCCGTCCTCTGCGGCAATAGACACAATTCTATTCAAAATCAAGGAAGATCCGAGCGCGAATCATTTCGTTTCTTCAGCTGAGGAGGAGAAATCCATAGCCATTAATCTCCTTCTCCCCCGGACTTCGAGCTTCACAACCACGACCACCACCGCAGGTGGTGACAACTTGCACCAGCAAACGCGCCGGCGAGTTGCCAGTGAAAACTCCTTGTCCGATCTATCCCGGAGTGGCCGGCGCCGTTCTCTGCGCCGTGATGTGGGCCGTGCTGCCGCTGAGACGTTTCTGATAACTCGTTTGTGTTTGAAGCTTTTGAGATATCTCGGGGTAGGCTACAGATGGGTCACAAGATTTCTTGCTTTAGGTTGTTATGCATTGTTACTATTCCCAGGCTTTCTTCAAGTTGGATATTATTACTTTTTCTCCACTCAAGTACGCCGGAGTATAGTTTATGGCGATCAACCGAGGAATAGGTTGGACTTGTACCTTCCAAAAAATAGCGATGGACCAAAACCGGTAGTCGCATTTGTGACGGGGGGAGCCTGGATTATAGGTTATAAAGCATGGGGCTCTCTTTTAGGACAACAATTATCAGAAAGAGATGTCATAGTAGCATGCATCGATTATCGAAATTTCCCACAAGGGACCATAAGTGATATGGTAAGAGATGCTTCCGAGGGTATCTCCTTTGTGTGCAATAATATTGCTGAATATGGTGGAGATCCTAATAGAATTTATCTAATGGGACAGTCGGCCGGGGCGCACATTGCTGCTTGTACGCTTTTAGAACAGGCAATCAAAGAGGGTGCTGGAGAGTGCACTTCTTGGAGCGTCTCCCAGATAAAAGCTTATTTCGGTCTTTCAGGAGGGTACAATCTGTGTAATCTAGTAGATTATTTTCACAGTAGAGGTCTGTATCGTTCTATCTTTTTAAGCATAATGGAAGGGGAACGGTCCTTACGGCGATTTTCTCCAGAATTGGTCGTGCAAGACCCCAAATCGAGAAATGCAGTTTCGATTCTCCCTTCCATCACTCTTTTTCATGGAACTGGAGATTATTCTATACCATCAGATGCCAGTAAGAATTTTGCAGAAACTCTTCAGAGAGTTGGAGTAAAAGCTGAAGCAATTCTTTATGAAGAAAAGACCCATACTGATATATTTCTACAGGATCCAATGAGAGGCGGTAAAGATCAGATGTTTGAAGACTTAATTGCCATCATTCATGCTGATGATGCAGATTCCCTAGCTAAATTTGCTGTATCTCTTCCAAGAAGACGCCTTGTTCCTGAATTTATACCTTCTTCTTCGGCTCTTGGGGCTTTTGTGCTGCCTTCTTTGGGGCAGACTTTGAGGCTGGAGCTTTTGCTGCAGCATCAGAGACTTTTGCAGGCTCCTTCTTTGCCTGCCCAAAGAGTTGAGTACCCACAGCAGGCACCTGTTGCTGGTTTGCCTCCCTGTATCTGTCAGCAACAATTACAAAAATCTGTTAAATGGGGACATAGAAAAGGTAATGGTGGATTCATAGAAGTGCTTAGTTTAAGACTATACGGGCTTCTTCTTCGGCTCCAAAGGCTTCTGGCCAGTCGTCTTCTGCGGCGTTGGCTTGGTGGCCGGAGCTTTTGGGGTTTGTTTGACAGGCTCTTTCTTCACCAGAGCCGGGGAAGGAGTGCTTACAGGGACACTCAAATCAGGAAGACATATAAGTGGACAGAAACTGGTAACAGGGAGACGAAAAGGCAAGAAATGGAAAACGAGTTAGGGCCGCTTCTGTTTCCGAGAGTGGCTGTGGCGGTCTTCGTCCTCAAGGGGACCTGCGTTCTGTTAGGTCGCCGTCTGTCTTCCATAGGCGACTCTACCTTCGCTCTTCCCGGTGGTCATCTGGAGTTCGGGGAGACGTTTGAGGAGTGTAGTGCGAGAGAGGTGAAGGAGGAGACAGGCCTAGACATAGAGAAAATGGAGCTATTGACAGTCACGAACAACCTGTTCTTGGACGAGCCGAAGCCTTCCCATTACGTGACGGTCTTCATGCGAGCAAGGCTGACTGACCCAGAGCAGGCGCCGCAGAATATGGAGCCAAGCAAGTGTGGTGGGTGGGGGTGGTTCCACTTAGCCTTCGGGAAACGACGATGCCTAGCCCGACGACGATCCTTACACGCGACGACGAGCCTTTGGCCTTCGACGCGAGACGACGATCTCGTCTCGTCTTCGGACTTCGAGGTGAGACGACGATCTCTTCTCGCCTTCACGCGAGTGGTGAGATCCAGAGGTCGTCGTCTCCAAACTCTCCACTGGAGAGTCTCCAGTGACTGCAACCTGGAGGGGCTCGAGCGGGCTTGTCGGGCCAGCCTTCCAAGCTCGCGAGCCCGCGATTTCGAGCTCGGCTCAGCCCGCTACAGTAACGGACTGAGCGGGCGGGCTGGTGAGTCAGCCCGCCCGTTAGCCATCATCCCGCCCGTTATCCATCCCTAG 2559 49.59 MSSSRILPVTHHPSSSYSPLESGIPSTMPPPSSAAIDTILFKIKEDPSANHFVSSAEEEKSIAINLLLPRTSSFTTTTTTAGGDNLHQQTRRRVASENSLSDLSRSGRRRSLRRDVGRAAAETFLITRLCLKLLRYLGVGYRWVTRFLALGCYALLLFPGFLQVGYYYFFSTQVRRSIVYGDQPRNRLDLYLPKNSDGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDVIVACIDYRNFPQGTISDMVRDASEGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTLLEQAIKEGAGECTSWSVSQIKAYFGLSGGYNLCNLVDYFHSRGLYRSIFLSIMEGERSLRRFSPELVVQDPKSRNAVSILPSITLFHGTGDYSIPSDASKNFAETLQRVGVKAEAILYEEKTHTDIFLQDPMRGGKDQMFEDLIAIIHADDADSLAKFAVSLPRRRLVPEFIPSSSALGAFVLPSLGQTLRLELLLQHQRLLQAPSLPAQRVEYPQQAPVAGLPPCICQQQLQKSVKWGHRKGNGGFIEVLSLRLYGLLLRLQRLLASRLLRRWLGGRSFWGLFDRLFLHQSRGRSAYRDTQIRKTYKWTETGNRETKRQEMENELGPLLFPRVAVAVFVLKGTCVLLGRRLSSIGDSTFALPGGHLEFGETFEECSAREVKEETGLDIEKMELLTVTNNLFLDEPKPSHYVTVFMRARLTDPEQAPQNMEPSKCGGWGWFHLAFGKRRCLARRRSLHATTSLWPSTRDDDLVSSSDFEVRRRSLLAFTRVVRSRGRRLQTLHWRVSSDCNLEGLERACRASLPSSRARDFELGSARYSNGLSGRAGESARPLAIIPPVIHP 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5220715 5229049 + BLOR00473 Blo01g00473 54913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00473 852 ProSiteProfiles Nudix hydrolase domain profile. 621 755 IPR000086 -
Blo01g00473 852 Pfam NUDIX domain 623 733 IPR000086 -
Blo01g00473 852 SUPERFAMILY alpha/beta-Hydrolases 166 437 IPR029058 -
Blo01g00473 852 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 620 745 - -
Blo01g00473 852 Gene3D alpha/beta hydrolase 170 422 IPR029058 -
Blo01g00473 852 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 98 462 - -
Blo01g00473 852 PRINTS NUDIX hydrolase family signature 664 679 IPR020476 -
Blo01g00473 852 PRINTS NUDIX hydrolase family signature 650 664 IPR020476 -
Blo01g00473 852 MobiDBLite consensus disorder prediction 1 31 - -
Blo01g00473 852 PANTHER ARYLACETAMIDE DEACETYLASE 98 462 - -
Blo01g00473 852 SUPERFAMILY Nudix 603 734 IPR015797 -
Blo01g00473 852 MobiDBLite consensus disorder prediction 75 107 - -
Blo01g00473 852 CDD Nudix_Hydrolase_19 622 731 - -
Blo01g00473 852 Pfam BD-FAE 188 396 - -
Blo01g00473 852 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00473 Blo-Chr1:5220715 Blo06g00961 Blo-Chr6:32842305 0 dispersed
Blo01g00473 Blo-Chr1:5220715 Blo01g00474 Blo-Chr1:5236628 4.83E-30 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00473 K15889 - jre:109004331 649.818