Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo01g00480 | ATGGCTTTTGCCTTGCTTTCTCAAATTCCACTTCTCTTCTTTGCCAGAACTTCAGGTTTTTTGGTTGCTGTGCTGGTTCTGTTCTGGGCTCTCGGCTTCAAATCTAGCTTTCTTCCTCGCTCGTCCTCTCAAGAAGACCTCATTTATGCTGTTCTTCATCCTATATTCATGGTGATCGGCTTCATTCTCATCAGTGGAGAAGCTATCTTGGTTCATAGATGGTTTCCTGGTTCAAGAAATTTGAAGAAATCTGTACATTTATGCCTGCAAGGCGTGGCTTTGACTTCTGGGATTTTTGGAATTTGGACTAAATTTCAGGGACAAGATGGGATTGTAGCTAATTTCTTCAGCCTCCATTCTTGGATGGGTCTGCTCTGTGTCTCCCTCTTTGGAGCTCAGTGGATTATGGGTTTTCTAAGCTTTTGGCATCGAGGCGAGGGTCGAACGACGAGAATAAGAGTACTTCCCTGGCATATATTCGTCGGTCTATACACATATGGTTTAGCAGTGGCAACAGCAGAGACTGGGCTGCTTGAGAAGTTGACATTTTTACAGGCGAAGAGGAATGGCCCTAGACACAATCCAGAGGCCATGGTTGTCAACAGTTTAGGATTGGGATTGGCTCTGCTCGGTGGGATTGTAATATTCAGCGCTGTTTCACCCAAACACCACAGCCTTGGAGCTAAACTAATGTACTCAGATGGCAAATCCCTCTCTTCTGAATAA | 726 | 44.9 | MAFALLSQIPLLFFARTSGFLVAVLVLFWALGFKSSFLPRSSSQEDLIYAVLHPIFMVIGFILISGEAILVHRWFPGSRNLKKSVHLCLQGVALTSGIFGIWTKFQGQDGIVANFFSLHSWMGLLCVSLFGAQWIMGFLSFWHRGEGRTTRIRVLPWHIFVGLYTYGLAVATAETGLLEKLTFLQAKRNGPRHNPEAMVVNSLGLGLALLGGIVIFSAVSPKHHSLGAKLMYSDGKSLSSE | 241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 5268824 | 5270709 | + | BLOR00480 | Blo01g00480 | 54920 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo01g00480 | 241 | PANTHER | CYTOCHROME B561-RELATED | 5 | 239 | IPR043205 | GO:0016491 | |
| Blo01g00480 | 241 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Blo01g00480 | 241 | CDD | Cyt_b561_ACYB-1_like | 42 | 185 | - | - | |
| Blo01g00480 | 241 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - | |
| Blo01g00480 | 241 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 5 | 239 | - | - | |
| Blo01g00480 | 241 | Gene3D | - | 1 | 227 | - | - | |
| Blo01g00480 | 241 | Pfam | Eukaryotic cytochrome b561 | 52 | 183 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g00480 | Blo-Chr1:5268824 | Blo17g00410 | Blo-Chr17:4816184 | 1.16E-57 | dispersed | |
| Blo01g00480 | Blo-Chr1:5268824 | Blo11g00348 | Blo-Chr11:2891230 | 1.12E-58 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo01g00480 | K08360 | - | jre:108993269 | 374.785 |