Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00481 ATGCAAGGGTTTCCAGACCAGTTTCTAATTCAACATCAGATTTTTCAACATCAAGAGCAAGAAAACAGCGATGTGTACGGAGGAGGAAGAGGATTGATTTTCCCAGAAGGTTCACCGGTTTTACATCCATGGTCGCTACCTCAAGTTCATCCCTTTAATCCGTCCCAGTTTGCCCCAACCACGGTTCGAGATCACGACACGTTTCTATCCCCTCCTTTGAACTCATATGACGTTTTTTTCAATCGAAGAGCTCCGGGTCTTCAGTTTGCATACGATGTTCCGTCCTCAGACCACCTCAGAATCCTATCAAACTCTCTTGGACGGCAGATTGAACCGGGTTCGGGACCTTTTGGTCTGCAATCGGAACTGGGGAAGATGACTGCTCAAGAAATAATGGATGCTAAGGCTCTCGCTGCTTCAAAAAGCCATAGCGAGGCTGAGAGAAGAAGGAGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGTTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTAGCAGAAGTAATACAACACGTTAAAGAACTTAAACGACAGACTTCTTTGATAGCAGAAACAAGTCCAGTTCCGACGGAAATGGATGAACTGACAGTCGATGCATCGGACGAAGATGGTAAATTTGTGATCAAAGCCTCTCTTTGTTGCGAGGATCGATCTGATCTTTTGCCGGATCTTATAAAAACGTTAAAATCACTGCGTTTAAGAACAATAAAAGCTGAAATAACGACACTTGGGGGAAGAGTGAAGAACGTGTTGTTCGTCACTGGAGAAGCAGATTCAGTAAGCGACGGCGAGCAAATACAGCAGGAATACTGTATAAGCTCGATTCAAGAAGCTCTTAAGTCAGTGATGGAGAAAGCCAGTGGAGATCATCATGAGTCTTCTTCTGGAAATGTTAAGAGACAAAGGACTAACAATATAAATATCCTTTAA 966 43.17 MQGFPDQFLIQHQIFQHQEQENSDVYGGGRGLIFPEGSPVLHPWSLPQVHPFNPSQFAPTTVRDHDTFLSPPLNSYDVFFNRRAPGLQFAYDVPSSDHLRILSNSLGRQIEPGSGPFGLQSELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEMDELTVDASDEDGKFVIKASLCCEDRSDLLPDLIKTLKSLRLRTIKAEITTLGGRVKNVLFVTGEADSVSDGEQIQQEYCISSIQEALKSVMEKASGDHHESSSGNVKRQRTNNINIL 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5281712 5283437 + BLOR00481 Blo01g00481 54921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00481 321 Pfam Helix-loop-helix DNA-binding domain 141 187 IPR011598 GO:0046983
Blo01g00481 321 Gene3D - 133 194 IPR036638 GO:0046983
Blo01g00481 321 MobiDBLite consensus disorder prediction 296 321 - -
Blo01g00481 321 PANTHER TRANSCRIPTION FACTOR BHLH30 56 321 IPR045847 GO:0003700|GO:0006355
Blo01g00481 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Blo01g00481 321 PANTHER TRANSCRIPTION FACTOR BHLH30 56 321 - -
Blo01g00481 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 194 IPR036638 GO:0046983
Blo01g00481 321 SMART finulus 144 193 IPR011598 GO:0046983
Blo01g00481 321 CDD bHLH_AtAIG1_like 133 211 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00481 Blo16g01050 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00481 Blo-Chr1:5281712 Blo11g00122 Blo-Chr11:913347 4.01E-50 dispersed
Blo01g00481 Blo-Chr1:5281712 Blo16g01050 Blo-Chr16:38996030 0 wgd
Blo01g00481 Blo-Chr1:5281712 Blo06g00953 Blo-Chr6:32757026 5.81E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11848 PF00010 HLH 2.10E-12 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00481 - - jre:108993280 459.914