Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00485 ATGGCTATTGTTGCAGCAGGAGGAGTAGGTCTGGATGTGACCAAGCTTCAACCTCATCGGTCGCAACTCGCTACCCCATTTCTCGGTAAGAAGTTTAGAATCAAACCCAACTTCGATTTACGTCCAAATTCGAGAATCGATGCCTCTGCTCTGAGAAAATCCCTTGTTTTGGCTTCGGGAGGGGGGCTAATCGATGCGATTCATGGCCTTTTTCTGGGTGTTGGGGTGGGGCTTCCTTGCACGGTTATGGAGTGCGGTGATATTATCTACAGAAGCACTCTGCCGAAGCCCAGCGGCTTAACACTCACAATTCCTGGTGCTATTCTTGCTCTTGGCACTATTTCTTATCTCTGGGCAACTCCTGGTGTTGCTCCCGGCTTTTTTGATATGTTCGTTCTTGCATTTGTGGAAAGACTTGTTAGACCCACTTTTAAAAAGGAAGATTTTGTTTTGGGGAAGAAGTTGGGAGAGGGAGCTTTTGGTGTGGTTTATAGAGTTTCGTTAGCAAAGAAGCCTTCCGACAAGAAAGAAGGCGATTTAGTGCTGAAGAGGGCTACCGAGTATGGTGCAGTTGAGATTTGGATGAATGAGCGAGCCCGAAGAGCTTGCGCAAATAGTTGTGCAGATTTTGTTTATGGCTTTCTTGAGGGCTCTTCCAAAAAAGGATCCGAATATTGGCTCATTTGGCGGTTCGAAGGGGAAGCCACTTTGGCTGATTTGATTCAAAGCAAAGATTTCCCTTACAATGTAGAGACTATGATTGTTGGTGAAGCTCAAGACTTGCCTAAGGGGTTGGAAAGAGAGAACAAAATCATTCAGACCATCATGAGACAGCTCTTGTTCGCATTGGACAGTCTTCATTCGGTCGGAATTGTTCATCGTGATATAAAGCCACAAAATGTCATTTTCTCTGAGGCAGGGTCTCGTACTTTCAAAATCATCGATCTCGGAGCTGCAACTGATTTAAGAGTAGGCATTAACTATATTCCGAAGGAATTTCTTCTGGATCCGAGATATGCCGCCCCTGAGCAATACATTATGAGTACACAAACCCCATCTGCTCCATCAGCACCTGTTGCAACTGCACTTTCTCCTGTCCTTTGGCAGATGAATCTTCCTGATAGATTCGACATCTATAGTGCCGGTCTCATCTTCTTGCAAATGGCATTTCCCGGATTACGAACAGACAACAGTCTCATACAATTCAACAGGCAATTGAAGAGGTGTGATTATGACTTGGTAGAATGGAGGAAAGGCGTGGAAGCTCGGGCCAGCCCGGAACTCCGGAAAGGATTCGAATTGCTCGATTTAGATGGAGGAATTGGGTGGGAACTTTTGACATCAATGGTTCGATATAAGGCTAGACAAAGAACCAGTGCAAAGGCAGCTTTGGCTCATCCATATTTCGACCGAGAAGGCCTTCTGGCATTATCGTTTATGCAGAAACTCAGACGACAAATTTTTCGAGCAACTCAGCAGGATTATAGTGAAGCTGTCAGCTGGGTTGTCAGGTTGATGGCTAAATCAGGAACTGAGCAAGTCGGTGGCTTCACTGAAGCTCAGCTTCAACAGCTCAGATGTTTTAAAACATTACAGTTGCAGGAAATGGAGCCGAAGAAGAAAGCAAGTGCTCAGAGAAATGCTCTTGCTTCAGTCCTTAAGCTTCAGAGGAAGATCATAAAGACGATAAACGAGAGCATGGACGAGCTCAATCGACCCAGAAAGAATCTATGGTGGAGAAGGTGGATTCCAAGAGAAGAATAA 1764 45.29 MAIVAAGGVGLDVTKLQPHRSQLATPFLGKKFRIKPNFDLRPNSRIDASALRKSLVLASGGGLIDAIHGLFLGVGVGLPCTVMECGDIIYRSTLPKPSGLTLTIPGAILALGTISYLWATPGVAPGFFDMFVLAFVERLVRPTFKKEDFVLGKKLGEGAFGVVYRVSLAKKPSDKKEGDLVLKRATEYGAVEIWMNERARRACANSCADFVYGFLEGSSKKGSEYWLIWRFEGEATLADLIQSKDFPYNVETMIVGEAQDLPKGLERENKIIQTIMRQLLFALDSLHSVGIVHRDIKPQNVIFSEAGSRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQMNLPDRFDIYSAGLIFLQMAFPGLRTDNSLIQFNRQLKRCDYDLVEWRKGVEARASPELRKGFELLDLDGGIGWELLTSMVRYKARQRTSAKAALAHPYFDREGLLALSFMQKLRRQIFRATQQDYSEAVSWVVRLMAKSGTEQVGGFTEAQLQQLRCFKTLQLQEMEPKKKASAQRNALASVLKLQRKIIKTINESMDELNRPRKNLWWRRWIPREE 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5329380 5332345 - BLOR00485 Blo01g00485 54925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00485 587 Gene3D Phosphorylase Kinase; domain 1 135 230 - -
Blo01g00485 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 18 587 IPR044803 GO:0004674|GO:0009579
Blo01g00485 587 Pfam Protein kinase domain 151 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00485 587 ProSitePatterns Protein kinases ATP-binding region signature. 155 183 IPR017441 GO:0005524
Blo01g00485 587 ProSiteProfiles Protein kinase domain profile. 149 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00485 587 SUPERFAMILY Protein kinase-like (PK-like) 145 476 IPR011009 -
Blo01g00485 587 CDD STKc_SNT7_plant 153 469 - -
Blo01g00485 587 SMART serkin_6 149 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00485 587 Gene3D Transferase(Phosphotransferase) domain 1 256 473 - -
Blo01g00485 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 18 587 - -
Blo01g00485 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00485 Blo16g01053 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00485 Blo-Chr1:5329380 Blo01g01649 Blo-Chr1:56285026 1.57E-12 dispersed
Blo01g01019 Blo-Chr1:31326311 Blo01g00485 Blo-Chr1:5329380 2.92E-96 transposed
Blo01g00485 Blo-Chr1:5329380 Blo16g01053 Blo-Chr16:39048920 5.08E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84083 PF00069 Pkinase 4.60E-21 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00485 - - qsu:111999120 924.85