Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00489 | ATGGGTGTTGATTATTCTGAGAAAATTCAGGGAATGGCTGGGGAGATGGGTTTCAAACAGTATGTAGAGGCGTTAAAGGAAGAACGCCGGAAAATTACGGTTTTCCAGCGGGAACTGCCCCTCTGTTTAGAACTTATCACTCAAGCGATTGAGTCTTGTACGCGGCAGTTGTCAGGGACGACGACGGAGTGTTTTAATGGAGGACAATCTGAGTGCTCGGAGCAGACTTCCAGTGAAGGTCCGGTGTTGGAGGAATTTATTCCGGTCAAAAGGGCTCTATCTTCTGAGTTCTCCGACGAAGAGAAAAAATCCCTGAAAATGAGAAAGGAGAGTAAGAATAGCGACAAGAAGAAAGCTGGTCAGTCGGATTGGCTCAAATCTGCTCAGTTATGGAATCAAGCTCCAGATCCTGACGTTAAGGAGGATGCACCGAACAAGACGGCGGTTGTGGAAGTGAAGAGAAATGGCGGAGCTTTCCGGCCATTCCACAGAGAGAAACTCAGCGGAAAGACAAACCAACTCGACGGAAAAGCGCCGACGGTGAATGCAACTTCAACGGCGGAAACATCTTCTCACAGCAGCCTCAGACCAGAAGAGAAAGAGGAACAGGGTAAAAGAAAGATCCGGCGATGCTGGTCACCGGAGCTACATCGCCGATTCTTGCGCGCTCTACACCAGCTCGGAGGATCAAGCGTGGCCACGCCAAAGCAGATTAGAGAGCTGATGAAATTGGATGGTCTAACTAACGACGAAGTTAAAAGCCATTTACAGAAATATCGTCTGCATACCAGAAGATCGAGTCCTCCGGCGCACAACAGTGGCGTCCAACCACCACCACAATATGTCGTAGTGGGTGGACTATGGGTGCAGCCGTCGGACTACGCGGCGGCACCGGCAACCACTGTTGCTGACGAGGTTAATAGAATGTGCGTGGTACCAGCTCCGGTATCGGAGGCATCAGGTTGTGGCGTTGAAAGGCCACAGCCAAAGCGATTAGTTCAGTCGAACTCCGAAGGAAAAACAGTCAGCCAAAGTGGAGGAGACGGCGTGGTCCATTCTAATTCTCCGGCGACGTCGTCGTCCACCCACACTTCTACAGCTTCCCCTCATCTTTGA | 1116 | 50.81 | MGVDYSEKIQGMAGEMGFKQYVEALKEERRKITVFQRELPLCLELITQAIESCTRQLSGTTTECFNGGQSECSEQTSSEGPVLEEFIPVKRALSSEFSDEEKKSLKMRKESKNSDKKKAGQSDWLKSAQLWNQAPDPDVKEDAPNKTAVVEVKRNGGAFRPFHREKLSGKTNQLDGKAPTVNATSTAETSSHSSLRPEEKEEQGKRKIRRCWSPELHRRFLRALHQLGGSSVATPKQIRELMKLDGLTNDEVKSHLQKYRLHTRRSSPPAHNSGVQPPPQYVVVGGLWVQPSDYAAAPATTVADEVNRMCVVPAPVSEASGCGVERPQPKRLVQSNSEGKTVSQSGGDGVVHSNSPATSSSTHTSTASPHL | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5393225 | 5394785 | + | BLOR00489 | Blo01g00489 | 54929 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 330 | 371 | - | - | |
Blo01g00489 | 371 | Pfam | Myb-like DNA-binding domain | 209 | 260 | IPR001005 | - | |
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 98 | 206 | - | - | |
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 157 | 171 | - | - | |
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 173 | 192 | - | - | |
Blo01g00489 | 371 | Gene3D | - | 206 | 264 | - | - | |
Blo01g00489 | 371 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 18 | 366 | IPR044787 | GO:0003700|GO:0006355 | |
Blo01g00489 | 371 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 207 | 262 | IPR006447 | GO:0003677 | |
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 318 | 371 | - | - | |
Blo01g00489 | 371 | PANTHER | TRANSCRIPTION FACTOR HHO2 | 18 | 366 | - | - | |
Blo01g00489 | 371 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 204 | 264 | IPR017930 | - | |
Blo01g00489 | 371 | SUPERFAMILY | Homeodomain-like | 205 | 265 | IPR009057 | - | |
Blo01g00489 | 371 | MobiDBLite | consensus disorder prediction | 98 | 122 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g00489 | Blo11g00832 | CCT | |
Blo01g00489 | Blo16g01054 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00489 | Blo-Chr1:5393225 | Blo01g00709 | Blo-Chr1:8643988 | 1.25E-61 | dispersed | |
Blo01g00489 | Blo-Chr1:5393225 | Blo11g00832 | Blo-Chr11:14222147 | 3.13E-107 | wgd | |
Blo01g00489 | Blo-Chr1:5393225 | Blo16g01054 | Blo-Chr16:39063120 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11849 | PF00249 | Myb_DNA-binding | 3.30E-07 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00489 | - | - | vvi:100257723 | 357.066 |