Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00492 ATGTTCAATGTGGATTCACCGTCCTCTTCCTCAAAAGATTTTCTTCTTGCTCTGCAGCTCTCTCCTTCTTCCTCTTTTCGGACACAGCTTTTACTTCTGCTTCCGCCATCGCCATCACTCCTGTTTGTTTTCTCAGAAAGTAAAACTGCAACCAAAAACAGAGGGAGAGAGAGAGAAACAGCCGTCTGGGACGACGAAAGCCAACGAAAGAAAACGTGTTTTCTGGACATTGGAGAGCTTGAACAATCCGCTGCTTTTCCTTCTTTTCATCCCGATGATGCTGTTGATTTAAGTTCAAGCTCCACTGCCATTTTAAAATCAAGCAATTTCCCCTTCGTCTCTGTCGACCAACCTTGCTGTACCTTAAACACGAATACCGATTCCTCAAACGTAGCTGGAAAGTTAATGTCATCGAAGGGTCGGAAGGCGGAGAAGACGACGGCAATAGTGTCTTTCGGAAACGGAATCTTTGAAAACTGGGGCGATTCAACAATGGCAGACAATAGTCAGCAGACTGACACTTCCACTGATTTAGACATTGACGACAGAAATCAGAGTAATGGAGTAGACGACGGAGTTCTTGTGGGTTTCTCAGATCAATCCAAGGAAAAAGCCGGCGATCAAAAGACACTTCGTCGGCTGGCTCAGAACCGAGAGGCTGCTCGGAAAAGTCGCCTGAGAAAGAAAGCGTATGTTCAGCAGCTGGAAAGCAGTAGAACGAGGCTTACACAGCTAGAGCAAGAGCTTCATCGATCTCTCGAGCAGGGAATTATTGTAGGTGATCATGCCAATTCCAGGACTGGAAATGTTTCTAATGTCTCAGGAGCCTTGGCATTTGATTCAGAGTATGCGCGTTGGCTCGAAGAACATCAACGGCTTATCAACGATCTAAAATCTGCCGTCAATGCTCGAATGGGCGACAACGAATTGTGTTTCCTCGTCGATGGTTTAATGTCCCATTACGATAAATTGTTTGTGCTGAAAAGAATCGGGACTAAGGCCGACGTATTTCACATACTTTCCGGCATGTGGAAGACGCCGGCCGAAAGGTGTTTCATGTGGTTGGGCGGATTCCGGTCATCGGAACTTCTCAAGATACTTGGGAGCCATCTCGAGCCATTGACAGATCAACAACTAATGGGTATATGCAATCTGCAGCAATCGTCTCAACAAGCTGAAGATGCACTATCACAAGGTATGGAAGCTCTGCAACAGTCTCTAATGGATACACTGTCTTCCATCTCTTTAGCCTCCTCCACTAGTTCAGAAAACGTGGCAGATTATATGGCTCAAATGGCCGTCGCCATGGCCAAGCTTGCTACCCTGGAAAACTTCCTCCACCAGGCTGATCTTCTGAGGCAGCAAACTCTTCAACAAATGCATCGAATTTTGTCGACCCGACAAGCCGCTTTCGCTCTTATTTTGGCTTCTGATTACGTCTCCCGTCTTCGAGCTCTCAGTTCGCTTTGGTTAGCCCGGCCGAGAGACTGA 1491 46.88 MFNVDSPSSSSKDFLLALQLSPSSSFRTQLLLLLPPSPSLLFVFSESKTATKNRGRERETAVWDDESQRKKTCFLDIGELEQSAAFPSFHPDDAVDLSSSSTAILKSSNFPFVSVDQPCCTLNTNTDSSNVAGKLMSSKGRKAEKTTAIVSFGNGIFENWGDSTMADNSQQTDTSTDLDIDDRNQSNGVDDGVLVGFSDQSKEKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRTRLTQLEQELHRSLEQGIIVGDHANSRTGNVSNVSGALAFDSEYARWLEEHQRLINDLKSAVNARMGDNELCFLVDGLMSHYDKLFVLKRIGTKADVFHILSGMWKTPAERCFMWLGGFRSSELLKILGSHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLMDTLSSISLASSTSSENVADYMAQMAVAMAKLATLENFLHQADLLRQQTLQQMHRILSTRQAAFALILASDYVSRLRALSSLWLARPRD 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5415350 5417906 + BLOR00492 Blo01g00492 54932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00492 496 MobiDBLite consensus disorder prediction 161 175 - -
Blo01g00492 496 Gene3D - 208 258 - -
Blo01g00492 496 SUPERFAMILY Leucine zipper domain 209 253 IPR046347 GO:0003700|GO:0006355
Blo01g00492 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 255 IPR004827 GO:0003700|GO:0006355
Blo01g00492 496 Pfam bZIP transcription factor 209 254 IPR004827 GO:0003700|GO:0006355
Blo01g00492 496 MobiDBLite consensus disorder prediction 161 191 - -
Blo01g00492 496 PANTHER TRANSCRIPTION FACTOR TGA9 95 496 - -
Blo01g00492 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Blo01g00492 496 Pfam Seed dormancy control 294 367 IPR025422 GO:0006351|GO:0043565
Blo01g00492 496 ProSiteProfiles DOG1 domain profile. 276 493 IPR025422 GO:0006351|GO:0043565
Blo01g00492 496 SMART brlzneu 205 271 IPR004827 GO:0003700|GO:0006355
Blo01g00492 496 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 95 496 - -
Blo01g00492 496 Coils Coil 228 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00492 Blo-Chr1:5415350 Blo04g00388 Blo-Chr4:3123559 8.89E-137 dispersed
Blo01g00492 Blo-Chr1:5415350 Blo09g00369 Blo-Chr9:14405255 1.10E-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11850 PF14144 DOG1 8.40E-26 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00492 K14431 - vvi:100249239 553.132