Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00512 ATGGTTAGAGCCTTTAGTCACCATCCCAGTATGCAGAAGTCAAGGTCGTTTCATTTCAAGAGAATGTTCGAACTTCCTGGAAGACATGCTCACAGCTTGATCCTCGAGAGTGGACATAACAACCAGGGCTCAAGAACCGCCGGAGAAAGCACCTCCGATCACAGGCCCATCGGTTGGTCGCTTAATATCAATACAGATAAAGGCTCATCCTTGGCTGAGAATATAAAAATAAAACCAAGACCCCTAAGCAGGCCAACCTCAGACCCGGAAATGATGAAGGAGAGGTTTGCTAAGCTTCTTTTAGGAGAAGATTTGTCTGGCAGTGGACAAGGTGTATCTTCTGCACTGGCTTTGTCAAACGCCATAACAAACCTTTCAGCTTCTGCATTTGCGGAGAAGAAGCTCGAGCCAATGCCTGCAGAGAAGAAAGGAAAATGGATAAAAGAAATGGACTGGCTTTTATCTGTAACTGATCATATCGTCGAGTTCGTCCCTTCAAAGCAGCAATCCAAGGATGGAACATTCATGGAGATCATGGTGACTCAACAAAGAAGCGATTTGCTCATGAATATTCCGGCCCTTCGGAAGCTTGATGCTATGCTAATTGACTGTTTGGATCATTTTGGGAATGAAAACGAATTCTGGTACGAAGAATCCGACGGAGATAACGAGCAGAAGGACGGAAACAAATGGTGGATACCGGAGGTGAAAGTTCCACCGACCGGATTATCAGAAGTTGCCCGGAAATGGCTACAATTTCAAAAGGATTGTGTCAAACAGGTACTAAAGGCAACAATGGCTATAAATGCTCAAGTTCTAACAGAAATGGAGATCCCAGAAAGCTACATTGAATCTCTTCCCAAGAACGGGAAGGCAAGTCTGGGCGATATAGTCTACAAAAGCATTACGGACGATTATTTCAACCCTTATCAGCTCCTTTCGAGCTTGGATTTATCAACCGAGCACAAAGTTCTTGACCTAAAAAATAGGGTTGAAGCCTCCATTGTAATATGGAAGAGAAAGATACACCACAAGGATGGAAAGCATTCGTGGAGTTCTTCAGTGAGTTTGGAGAAAAGAGAACTTTTTGAAGAGAGGGCAGAAACCATTTTGCTTCTACTCAAACAAAAATTTCCTGGAATTTCACAATCTGCATTAGACATCAGTAAAATCCAATATAACAAGGATGTGGGATACTCAATTTTAGAGAGTTATTCGAGGATAGTAGAAAGCTTGGCATTCAATATAATTTCTAGGATAGAGGATGTGCTTCATGCTGATTCTCTAATTGATCGAACCCCATCGGCAGAAAACTTAACCAATAAGGTTTTCATGGAGTCTTCCCCAAAAGCAAATGCCATGGGAGACGAAAATTCGAAGCTGAATATAACAGAGACAAAAACACTATCGGATTTCATGGGTTGGAAATTGCATAAGGGAGATGCTGATGTGAAGAACATCTCAACAGGAAATTTTACAGGTCAGTGCTTCAAAGAAGAAAATGAGAAGTATATGAGCAAACCTGGCAGCAATTTTACCATCAAGAAACTTTCCTACTTGGAAAAGCTTGAGAACTTCAGTGGGTTGAGAAGTCCAATATCTCGCCATTAG 1611 41.96 MVRAFSHHPSMQKSRSFHFKRMFELPGRHAHSLILESGHNNQGSRTAGESTSDHRPIGWSLNINTDKGSSLAENIKIKPRPLSRPTSDPEMMKERFAKLLLGEDLSGSGQGVSSALALSNAITNLSASAFAEKKLEPMPAEKKGKWIKEMDWLLSVTDHIVEFVPSKQQSKDGTFMEIMVTQQRSDLLMNIPALRKLDAMLIDCLDHFGNENEFWYEESDGDNEQKDGNKWWIPEVKVPPTGLSEVARKWLQFQKDCVKQVLKATMAINAQVLTEMEIPESYIESLPKNGKASLGDIVYKSITDDYFNPYQLLSSLDLSTEHKVLDLKNRVEASIVIWKRKIHHKDGKHSWSSSVSLEKRELFEERAETILLLLKQKFPGISQSALDISKIQYNKDVGYSILESYSRIVESLAFNIISRIEDVLHADSLIDRTPSAENLTNKVFMESSPKANAMGDENSKLNITETKTLSDFMGWKLHKGDADVKNISTGNFTGQCFKEENEKYMSKPGSNFTIKKLSYLEKLENFSGLRSPISRH 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5644416 5646548 + BLOR00512 Blo01g00512 54952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00512 536 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 88 430 IPR005512 GO:0005085
Blo01g00512 536 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 10 1 536 - -
Blo01g00512 536 Gene3D PRONE domain, subdomain 1 93 429 - -
Blo01g00512 536 MobiDBLite consensus disorder prediction 38 58 - -
Blo01g00512 536 ProSiteProfiles PRONE domain profile. 79 437 IPR005512 GO:0005085
Blo01g00512 536 Gene3D PRONE domain, subdomain 2 277 393 - -
Blo01g00512 536 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 536 IPR038937 GO:0005085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00512 Blo16g01026 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00512 Blo-Chr1:5644416 Blo13g00874 Blo-Chr13:31297082 1.60E-131 dispersed
Blo01g00512 Blo-Chr1:5644416 Blo16g01026 Blo-Chr16:38619352 0 wgd
Blo01g00512 Blo-Chr1:5644416 Blo05g00090 Blo-Chr5:859162 0 wgd
Blo01g00512 Blo-Chr1:5644416 Blo06g00694 Blo-Chr6:30067018 0 wgd
Blo01g00512 Blo-Chr1:5644416 Blo07g00754 Blo-Chr7:24503953 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00512 - - qsu:112015052 660.603