Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00513 ATGGGTGAAGGAGAGGAGGCTGATTCGGTTCAAGAAAAGACTCAGCCAGATGGTGCGACATCAAGTGACGCTGCTTCGTCAGACGTCCCAGCTAAAAAGCTCGCGAGGCAGCTGGATTTTACGGGCTTTGGGAGGATGTCAGGGAGTGTGGTCTTGCCTGAGCATCCTCAGCCTCAATCTCAGATACAGTCGCAGTCGCGTTCTCAGTTGCCAACTGTGGCGGCACCTGCGCCCCAGAGCCAGCCTCAATTACAGCCGCCTCAGTCACAGCCACAGATGGTGGTCATACCCGTAGTACCATCTCCGAGGGTTTCAAAACCAGATTCCCCAAAGTCAAGACCAAGATCCAACGTTGAAGCAAAAGATTGTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAACACTCACGGTGCTTAAAGTTGTATTGTGAGTGTTTTGCTTCTGGAATATATTGCGATGGTTGTAACTGCATAAACTGCTATAATAATGTTGAAAATGAAGCTGCTAGGCGTGAAGCAGTTGAATCCACTTTGGAGCGTAATCCAAATGCGTTTCGACCAAAAATTGCTAGCAGTCCACAGGGGATACGTGATAATAGGGAAGAAGCTGGAGAGGTTCTAATGTTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGGTGCCTAAAAAAGTACTGTGAGTGTTTCCAGGCCAACATTCTCTGCTCTGACAATTGTAAATGCATGGATTGCAAAAACTTTGATGGAAGTGAAGAGAGACAAGCTCTATTCCATGGGGACCATGGAAATAACATTGCATACATACAGCAGGCAGCTAATGCTGCTATAACCGGAGCTATTGGATCCTCGGGATATGCATCCCCTCCGGTGTCAAAGAAAAGGAAAGGACAAGAGCTTTTCTTTGGGGCAACGCCCAAAGATTCGTCCATTCATAGGCTGGCACAATCTCAACAGGCAAATCAGATTAGAACTTCAACGGCCTCCTTGCCTTCAATCCCTGTTACTCGAGCTGGTTCCAATGCAGCATTGGCCCCCTCAAAGTTCACTTACAGATCATTATTAGCAGACATCATCCAACCACAGGATTTGATGGAGCTCTGCTCTGTATTAGTTGTTCTGTCAAGTGAAACTGCCAAGACAGTCGCAGATCAAAGAAATGCTACAGAAAGGGGGGCCGACAATCAAACAAAAGAAACTTGCCTTGCTTCCGCAACTCATGAGAGGCTGCAGAGTCAAAAGGAATCTGTGGAGAAAGCTGTAGACAATGATTGTTCTAGTGCAAATCAGGCTGATAAAATCAGCCCTGGTAATTCCAGTTCAGACGGAGCAGATGTACCAAAAGGAAGGCCCATGTCTCCGGGAACTTTAGCTTTGATGTGCAATGAAGAAGACGCAATGTTTATAGCAGCTGCGTCACCCAATGGGATAATGGGTCATGGTTGCACTGCATCATCGCAATTGTCATGTGGACAAGACATGTCGGAAGTCTACGCAGAGCAAGAACGGATAATCTTGACAACATTTCGTGATTGTCTGAAGAAGCTCATAACTTTTGGCGAGATAAAAGAAGCAAAGTGCTCATATCTAGCTCGAAACAATGTAGGAAATCACAAAGACCAACTCTGTAATGGTACAACTAAACCCCAAACCGAAGGCGGAAGTCAAACTCAACAGGCACCCATCATTAACGGAGTTGGAGTAATTCCGCCCAAGACATCACCGATGGTCAACTCGACGACGGTGATCCCTCCCAATGCTCATCATCACAAAATTGCATCTCTTCCAGGGCAGGATATTCGCTTCGAAGCAGGAAGAAGTGGAAGAGCTTCAATGGCGTCCTCGAAGCTGGTCATTAGGTTATCTTCCCGATTACAGGCCATTGCTCCAAAGCTCAGTAGAAAATCTCTTTTGCCGGAGCTCTGTTCTCCTAAATTTAACCGCCGAACTTCATTTTTAGATTCCTCCACTCGCATTGCTCGCAATTCGAGATTACCCGTGGAGTTGGGTAGTCAGGAGTCGATGATGCCGTTGCACAGCGCCATTGCTTCTGCCCGATTGATTTCAAGCTTAACAATTGATTCCCAGAGCTGGGGTTTAGTTCCTCAAGGTCTGTATTATCACTCTTCATTGCCAATTGCTATTTGA 2151 46.26 MGEGEEADSVQEKTQPDGATSSDAASSDVPAKKLARQLDFTGFGRMSGSVVLPEHPQPQSQIQSQSRSQLPTVAAPAPQSQPQLQPPQSQPQMVVIPVVPSPRVSKPDSPKSRPRSNVEAKDCTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENEAARREAVESTLERNPNAFRPKIASSPQGIRDNREEAGEVLMLGKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFDGSEERQALFHGDHGNNIAYIQQAANAAITGAIGSSGYASPPVSKKRKGQELFFGATPKDSSIHRLAQSQQANQIRTSTASLPSIPVTRAGSNAALAPSKFTYRSLLADIIQPQDLMELCSVLVVLSSETAKTVADQRNATERGADNQTKETCLASATHERLQSQKESVEKAVDNDCSSANQADKISPGNSSSDGADVPKGRPMSPGTLALMCNEEDAMFIAAASPNGIMGHGCTASSQLSCGQDMSEVYAEQERIILTTFRDCLKKLITFGEIKEAKCSYLARNNVGNHKDQLCNGTTKPQTEGGSQTQQAPIINGVGVIPPKTSPMVNSTTVIPPNAHHHKIASLPGQDIRFEAGRSGRASMASSKLVIRLSSRLQAIAPKLSRKSLLPELCSPKFNRRTSFLDSSTRIARNSRLPVELGSQESMMPLHSAIASARLISSLTIDSQSWGLVPQGLYYHSSLPIAI 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5647790 5654553 - BLOR00513 Blo01g00513 54953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00513 716 PANTHER TESMIN/TSO1-RELATED 24 561 IPR028307 -
Blo01g00513 716 SMART CXC_2 126 166 IPR033467 -
Blo01g00513 716 SMART CXC_2 211 252 IPR033467 -
Blo01g00513 716 MobiDBLite consensus disorder prediction 407 452 - -
Blo01g00513 716 MobiDBLite consensus disorder prediction 13 27 - -
Blo01g00513 716 MobiDBLite consensus disorder prediction 423 443 - -
Blo01g00513 716 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 214 248 IPR005172 -
Blo01g00513 716 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 128 163 IPR005172 -
Blo01g00513 716 MobiDBLite consensus disorder prediction 46 121 - -
Blo01g00513 716 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 24 561 - -
Blo01g00513 716 MobiDBLite consensus disorder prediction 1 33 - -
Blo01g00513 716 MobiDBLite consensus disorder prediction 53 79 - -
Blo01g00513 716 ProSiteProfiles CRC domain profile. 127 251 IPR005172 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00513 Blo16g01025 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00513 Blo-Chr1:5647790 Blo02g00527 Blo-Chr2:8671327 1.68E-30 dispersed
Blo15g00696 Blo-Chr15:21895112 Blo01g00513 Blo-Chr1:5647790 2.48E-06 transposed
Blo01g00513 Blo-Chr1:5647790 Blo16g01025 Blo-Chr16:38605507 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11853 PF03638 TCR 3.00E-12 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00513 - - zju:107431760 747.658