Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00519 ATGGGGAACGGAACCGAACCCAGAACCGACCTCGGTTCCGGGTCCAGAACCGGCGGTTCTCTAAATCAAACAGAGGCTCGTCGGAGAAATCAAACAGAGGCTCATCGGAGAAATCAAACAGAGGCTCGTCGCAGGCTCATCGCAGGCTTGCAGTGCTCGTCGCAGTGCTCAGGGATGCAGTTGTCTCCCGACTCCGCGAAGAACAGATCTGTCGCCTTCTGTAATGCAATTTACAGATTGCATTACAGAGTAGAACACAGAGGACGGGGAGGGTGGGTACTGGGGCGTTATACGAGCACTCAAGCAGAGCTCCAATGGCTACCACTTCCGAGATATCTCACCAAGCTTGATGTGTTCGTCAATGGAGGATGCAAGTGCCTATTGTTTTTTTCTATGGATATTAGCTCTCGAGTTCTCAGAAAGTTAACTCCGATGTTTGCTCTGTTCATTTGTCATAGTTCAGTATTTAAGTATTTCTGCTTCCACTTACCTGCAATGGCCAACGCGTTCAACACAGCTACTGAGGCAAGTACCACCCACTTGTCTTCCTTCCCTATCTCCTCCTCTTCTTCTTCTTCTTCTTCATCTTCAGGACCCGACCCGAAGAAGGTTAAGCGAACCCGAGATAGTAATGGTAAACACCCGGTTTACAGAGGGGTCCGAATGCGGGTTTGGGGAAAATGGGTATCCGAAATCAGAGAACCCAGAAAGAAGAGCCGGATTTGGCTCGGAACTTTTTCGACGGCGGAAATGGCGGCTAGGGCTCATGATGTCGCTGCTTTAACCATCAAAGGAAAATCTGCGATCCTGAACTTCCCGGAAATGGCCGGAATACTTCCTCGGCCGTCTTCGAACTCTCCCCGTGACATTCAAGCTGCCGCCACTCTGGCCGCGTCAATGGAAATTCTTCCGGCGACTCCTCCAGAATCGTCACATCCTCCGCCTTCTGAACCGTCATCTTCATCCTCCTCATTCCACGCTCCATCTCCGGAGGAACTCACTGAGATAGTACAACTTCCGAGTTTAGGAACGAGCTACGAATCACCCGAGTCGGAATTCATGTTACTGGACTCAGACGATCGGTGGCTCTATACAGAGAATTTCGAGTTCTTCAGCGATCAGATATCCATGGCGGAGACAGAAAGCTTCAATTTTTTCTCGTGGCAACAGTAA 1173 50.13 MGNGTEPRTDLGSGSRTGGSLNQTEARRRNQTEAHRRNQTEARRRLIAGLQCSSQCSGMQLSPDSAKNRSVAFCNAIYRLHYRVEHRGRGGWVLGRYTSTQAELQWLPLPRYLTKLDVFVNGGCKCLLFFSMDISSRVLRKLTPMFALFICHSSVFKYFCFHLPAMANAFNTATEASTTHLSSFPISSSSSSSSSSSGPDPKKVKRTRDSNGKHPVYRGVRMRVWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGKSAILNFPEMAGILPRPSSNSPRDIQAAATLAASMEILPATPPESSHPPPSEPSSSSSSFHAPSPEELTEIVQLPSLGTSYESPESEFMLLDSDDRWLYTENFEFFSDQISMAETESFNFFSWQQ 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5705740 5714016 + BLOR00519 Blo01g00519 54959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00519 390 MobiDBLite consensus disorder prediction 1 40 - -
Blo01g00519 390 CDD AP2 217 274 IPR001471 GO:0003700|GO:0006355
Blo01g00519 390 SMART rav1_2 216 279 IPR001471 GO:0003700|GO:0006355
Blo01g00519 390 MobiDBLite consensus disorder prediction 184 214 - -
Blo01g00519 390 PRINTS Ethylene responsive element binding protein signature 239 255 IPR001471 GO:0003700|GO:0006355
Blo01g00519 390 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700|GO:0006355
Blo01g00519 390 SUPERFAMILY DNA-binding domain 216 273 IPR016177 GO:0003677
Blo01g00519 390 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 174 369 - -
Blo01g00519 390 Gene3D AP2/ERF domain 216 275 IPR036955 GO:0003700|GO:0006355
Blo01g00519 390 Pfam AP2 domain 215 265 IPR001471 GO:0003700|GO:0006355
Blo01g00519 390 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 174 369 - -
Blo01g00519 390 MobiDBLite consensus disorder prediction 1 27 - -
Blo01g00519 390 MobiDBLite consensus disorder prediction 184 200 - -
Blo01g00519 390 MobiDBLite consensus disorder prediction 304 330 - -
Blo01g00519 390 ProSiteProfiles AP2/ERF domain profile. 216 273 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00519 Blo-Chr1:5705740 Blo17g00070 Blo-Chr17:534712 3.77E-56 dispersed
Blo14g00741 Blo-Chr14:19962241 Blo01g00519 Blo-Chr1:5705740 6.91E-17 dispersed
Blo01g00271 Blo-Chr1:3437794 Blo01g00519 Blo-Chr1:5705740 1.78E-42 transposed
Blo01g00519 Blo-Chr1:5705740 Blo16g01019 Blo-Chr16:38553246 2.01E-86 wgd
Blo01g00519 Blo-Chr1:5705740 Blo08g00315 Blo-Chr8:4539119 1.13E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11854 PF00847 AP2 7.80E-13 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00519 K09286 - tcc:18588535 231.491