Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00529 ATGTCGTGGCAAACATATGTCGATGAACATCTGATGTGCGATATCGATGGAAATCAGCTCACTGCAGCTGCAATCATCGGGCATGATGGAAGCGTTTGGGCCCAAAGCTCCACCTTCCCTCAGTTCAAGACTGAAGAAATAACTGGGATTATGGCTGACTTTGCTGAACCCGGAACACTTGCTCCAACTGGCTTGTACCTTGGAGGTGCAAAATATATGGTGATCCAAGGCGAGCCAGGAGCTGTTATTCGTGGGAAGAAGAATTCAGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGATAGGAAAATTCTTTGCTTTAAAGGTTATCCAGATGAACATACAAGAAGATATACGCAAACAGATAGTGCAGGAGTTAAAAATAAATCAAACAGCTCAGTGTCCACAAGTGGTGGTATGCTACCACTCATTCTACCACAATGGAGCTATTTCTCTTGTCCTAGAATACATGGATCGCGGATCTTTGGCAGATGTGATTCGACAAGTGAAAACAATTCTTGAACCATATCTGGCTGTGTTACTGGGTCTAGTGTACTTGCATCATGAACGACATGTCATACATAGGGACATAAAGCCATCCAATCTGCTTGTGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTATGCTAGCTAGCTCTATGGGCCAGAGGGATACTTTTGTAGGAACTTACAACTATATGGCGCCAGAGAGAATTAGTGGGAGTACCTATGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTAGTACTTGAGTGTGCTATAGGACGGTTTCCATACACGCAATCTGAAGATCAGAAGAGTTGGCCAAGCTTTTACGAGCTTTTAACAGCAATTGTGTCAAGCCCCCCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCTTGCATTCAAAAGGACCCGCAAAGGAGATCACCATCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATACTTGTTGGCAGCTTGGAACCTCCTTTAAATTTCCCTAGGGTGACGATGGAAAGAGGTGGTGATCATGAATCAACATCGACCGTCGGATCCTTATTTGAGAGTTCGATCAACTCCGTTGAATCTTCCTCGTCGGAGCTGGTGGAGGATGCGTCGTCTTCCTCGACCTCAAACTCTTCGTTGTCTTTGTCAGCTTCGCCATTGCCAAGAAGGAATGGACCTTTATACGAATTATCCGAGCTCATGACCAATCTTCCTATAAAGAGAGGTCTGTCGAAATACTATGACGGGAAGTCAGAGTCTTTCGCAAGCATAGAGAGAGTTGAGAGTTTGGAGAATCTGGCTAAGAGGAAGAAGGCGAGTTTTAGCCATTACAATAAGAAGCTTAAAGGAAGCAGAAGCTATGGAGGAGGGTTGGAATCAGATGATCATAAATCTAGTGATCCAACTGTAATTACTGCTCAGAAAGCTTCAGAGGTTGTGACTTCAGTGGGCTTATATGATTTTGTGGATTTTGAATTGGTACTCGAGGTTGTAGCTCTAATTGGGTTGCCACATATGAAAACCCGATGGGGGCTGTTCAATAACATGTCTATTTTGTATATGAGAGTGAATGCTCTTAATGCTTTGGGTGGTCTTGGTATCAAAGCATCACGAAGCTATCCTCGTGCATCTTTTGTTGCATGA 1794 43.53 MSWQTYVDEHLMCDIDGNQLTAAAIIGHDGSVWAQSSTFPQFKTEEITGIMADFAEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKNSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWIGKFFALKVIQMNIQEDIRKQIVQELKINQTAQCPQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVLLGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKDPQRRSPSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFPRVTMERGGDHESTSTVGSLFESSINSVESSSSELVEDASSSSTSNSSLSLSASPLPRRNGPLYELSELMTNLPIKRGLSKYYDGKSESFASIERVESLENLAKRKKASFSHYNKKLKGSRSYGGGLESDDHKSSDPTVITAQKASEVVTSVGLYDFVDFELVLEVVALIGLPHMKTRWGLFNNMSILYMRVNALNALGGLGIKASRSYPRASFVA 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5842737 5853990 - BLOR00529 Blo01g00529 54969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00529 597 Pfam Profilin 1 89 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Blo01g00529 597 SMART serkin_6 103 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00529 597 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Blo01g00529 597 Gene3D Phosphorylase Kinase; domain 1 110 186 - -
Blo01g00529 597 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 86 382 - -
Blo01g00529 597 ProSiteProfiles Protein kinase domain profile. 103 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00529 597 SUPERFAMILY Profilin (actin-binding protein) 2 90 IPR036140 -
Blo01g00529 597 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Blo01g00529 597 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Blo01g00529 597 Pfam Protein kinase domain 104 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00529 597 MobiDBLite consensus disorder prediction 413 436 - -
Blo01g00529 597 Gene3D Dynein light chain 2a, cytoplasmic 1 109 - -
Blo01g00529 597 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Blo01g00529 597 Gene3D Transferase(Phosphotransferase) domain 1 187 373 - -
Blo01g00529 597 CDD PKc_MAPKK_plant_like 101 363 - -
Blo01g00529 597 SMART prof_2 1 138 IPR005455 GO:0003779
Blo01g00529 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Blo01g00529 597 SUPERFAMILY Protein kinase-like (PK-like) 101 427 IPR011009 -
Blo01g00529 597 CDD PROF 2 87 IPR005455 GO:0003779
Blo01g00529 597 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 86 382 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00529 Blo-Chr1:5842737 Blo14g00559 Blo-Chr14:8397327 1.45E-135 dispersed
Blo01g00529 Blo-Chr1:5842737 Blo14g00525 Blo-Chr14:7457778 1.18E-20 wgd
Blo01g00529 Blo-Chr1:5842737 Blo16g01002 Blo-Chr16:38385098 1.05E-54 wgd
Blo01g00529 Blo-Chr1:5842737 Blo05g00073 Blo-Chr5:732465 6.85E-22 wgd
Blo01g00529 Blo-Chr1:5842737 Blo08g00324 Blo-Chr8:4882509 1.72E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84085 PF00069 Pkinase 6.70E-60 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00529 K04368 - qsu:111995051 533.102