Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00529 | ATGTCGTGGCAAACATATGTCGATGAACATCTGATGTGCGATATCGATGGAAATCAGCTCACTGCAGCTGCAATCATCGGGCATGATGGAAGCGTTTGGGCCCAAAGCTCCACCTTCCCTCAGTTCAAGACTGAAGAAATAACTGGGATTATGGCTGACTTTGCTGAACCCGGAACACTTGCTCCAACTGGCTTGTACCTTGGAGGTGCAAAATATATGGTGATCCAAGGCGAGCCAGGAGCTGTTATTCGTGGGAAGAAGAATTCAGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGATAGGAAAATTCTTTGCTTTAAAGGTTATCCAGATGAACATACAAGAAGATATACGCAAACAGATAGTGCAGGAGTTAAAAATAAATCAAACAGCTCAGTGTCCACAAGTGGTGGTATGCTACCACTCATTCTACCACAATGGAGCTATTTCTCTTGTCCTAGAATACATGGATCGCGGATCTTTGGCAGATGTGATTCGACAAGTGAAAACAATTCTTGAACCATATCTGGCTGTGTTACTGGGTCTAGTGTACTTGCATCATGAACGACATGTCATACATAGGGACATAAAGCCATCCAATCTGCTTGTGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTATGCTAGCTAGCTCTATGGGCCAGAGGGATACTTTTGTAGGAACTTACAACTATATGGCGCCAGAGAGAATTAGTGGGAGTACCTATGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTAGTACTTGAGTGTGCTATAGGACGGTTTCCATACACGCAATCTGAAGATCAGAAGAGTTGGCCAAGCTTTTACGAGCTTTTAACAGCAATTGTGTCAAGCCCCCCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCTTGCATTCAAAAGGACCCGCAAAGGAGATCACCATCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATACTTGTTGGCAGCTTGGAACCTCCTTTAAATTTCCCTAGGGTGACGATGGAAAGAGGTGGTGATCATGAATCAACATCGACCGTCGGATCCTTATTTGAGAGTTCGATCAACTCCGTTGAATCTTCCTCGTCGGAGCTGGTGGAGGATGCGTCGTCTTCCTCGACCTCAAACTCTTCGTTGTCTTTGTCAGCTTCGCCATTGCCAAGAAGGAATGGACCTTTATACGAATTATCCGAGCTCATGACCAATCTTCCTATAAAGAGAGGTCTGTCGAAATACTATGACGGGAAGTCAGAGTCTTTCGCAAGCATAGAGAGAGTTGAGAGTTTGGAGAATCTGGCTAAGAGGAAGAAGGCGAGTTTTAGCCATTACAATAAGAAGCTTAAAGGAAGCAGAAGCTATGGAGGAGGGTTGGAATCAGATGATCATAAATCTAGTGATCCAACTGTAATTACTGCTCAGAAAGCTTCAGAGGTTGTGACTTCAGTGGGCTTATATGATTTTGTGGATTTTGAATTGGTACTCGAGGTTGTAGCTCTAATTGGGTTGCCACATATGAAAACCCGATGGGGGCTGTTCAATAACATGTCTATTTTGTATATGAGAGTGAATGCTCTTAATGCTTTGGGTGGTCTTGGTATCAAAGCATCACGAAGCTATCCTCGTGCATCTTTTGTTGCATGA | 1794 | 43.53 | MSWQTYVDEHLMCDIDGNQLTAAAIIGHDGSVWAQSSTFPQFKTEEITGIMADFAEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKNSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWIGKFFALKVIQMNIQEDIRKQIVQELKINQTAQCPQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVLLGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKDPQRRSPSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFPRVTMERGGDHESTSTVGSLFESSINSVESSSSELVEDASSSSTSNSSLSLSASPLPRRNGPLYELSELMTNLPIKRGLSKYYDGKSESFASIERVESLENLAKRKKASFSHYNKKLKGSRSYGGGLESDDHKSSDPTVITAQKASEVVTSVGLYDFVDFELVLEVVALIGLPHMKTRWGLFNNMSILYMRVNALNALGGLGIKASRSYPRASFVA | 597 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5842737 | 5853990 | - | BLOR00529 | Blo01g00529 | 54969 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00529 | 597 | Pfam | Profilin | 1 | 89 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Plant profilin signature | 27 | 40 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Plant profilin signature | 52 | 66 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Plant profilin signature | 71 | 80 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | SMART | serkin_6 | 103 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo01g00529 | 597 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Blo01g00529 | 597 | Gene3D | Phosphorylase Kinase; domain 1 | 110 | 186 | - | - | |
Blo01g00529 | 597 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 | 86 | 382 | - | - | |
Blo01g00529 | 597 | ProSiteProfiles | Protein kinase domain profile. | 103 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo01g00529 | 597 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 90 | IPR036140 | - | |
Blo01g00529 | 597 | PRINTS | Profilin signature | 40 | 60 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Profilin signature | 21 | 30 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Profilin signature | 64 | 78 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | Pfam | Protein kinase domain | 104 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo01g00529 | 597 | MobiDBLite | consensus disorder prediction | 413 | 436 | - | - | |
Blo01g00529 | 597 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 109 | - | - | |
Blo01g00529 | 597 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 132 | IPR017441 | GO:0005524 | |
Blo01g00529 | 597 | Gene3D | Transferase(Phosphotransferase) domain 1 | 187 | 373 | - | - | |
Blo01g00529 | 597 | CDD | PKc_MAPKK_plant_like | 101 | 363 | - | - | |
Blo01g00529 | 597 | SMART | prof_2 | 1 | 138 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672|GO:0006468 | |
Blo01g00529 | 597 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 427 | IPR011009 | - | |
Blo01g00529 | 597 | CDD | PROF | 2 | 87 | IPR005455 | GO:0003779 | |
Blo01g00529 | 597 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 86 | 382 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00529 | Blo-Chr1:5842737 | Blo14g00559 | Blo-Chr14:8397327 | 1.45E-135 | dispersed | |
Blo01g00529 | Blo-Chr1:5842737 | Blo14g00525 | Blo-Chr14:7457778 | 1.18E-20 | wgd | |
Blo01g00529 | Blo-Chr1:5842737 | Blo16g01002 | Blo-Chr16:38385098 | 1.05E-54 | wgd | |
Blo01g00529 | Blo-Chr1:5842737 | Blo05g00073 | Blo-Chr5:732465 | 6.85E-22 | wgd | |
Blo01g00529 | Blo-Chr1:5842737 | Blo08g00324 | Blo-Chr8:4882509 | 1.72E-16 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84085 | PF00069 | Pkinase | 6.70E-60 | CL0016 | Blo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00529 | K04368 | - | qsu:111995051 | 533.102 |