Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00533 ATGAAGATCGAGTATTTGGAGGACCAGGCATCTGACGGGGACGATGAAGTTTTTGACACTCAAATTGCCAAGGCTGATGCTAAGAGAGCTTTAGTTGGAGCGGGGGCGAGGATCCTGTTTTATCCGACTCTTTTGTATAATGTGGTTCGGAATAAGATTGAATCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTCTTTTAGGTGCTGTTCCCTTTCCTAAAGATGTTCCTCGGCTGAAGCAGCTCGGTGTTGGTGGTGTTATCACTCTGAACGAATCTTATGAAACTCTCGTTCCATCGGCCTTGTATCGTAGCCATGGCATTGACCATTTAACGATTCCAACAAGAGATTATTGTTTTGCTCCTAAATTTGCAGATATAAGCCGAGCAGTTGATTTTATTCATAAAAATGCATCTTATGGGAAAACTACATACGTTCATTGCAAAGCAGGAAGAGGGAGGAGCACGACTATCGTCCTCTGCTATTTGGTTAAGTATAAAGACATGACGCCTATCGGGGCCTTAGATTTTGTTCGAATGAGGAGGCCTCGTGTTTTGTTGGCACCCTCGCAATGGGAGGCAGTTAAAGAATATAGCAATCGCCTCCCCACAACAGGCGCATACTCTCCCTCGAGAGATGCAGTTCTCGTCACAAAAGCCGACCTCGAGGGGTATTATGCGAATGGCAATGATTTCTCTGGTAAAGAGTTGGCAATTATCCCTAAAGTGGCAAAAACTAAGCCAATGATCGCCAGGCTGTCTTGTCTTTTTGCGTCCTTGAAAGTTAATGGGGGCAGCTCAGTCACAAGACGGATGCCTGTGCCGGAAGCTCGAGCTTGCTGA 849 45.47 MKIEYLEDQASDGDDEVFDTQIAKADAKRALVGAGARILFYPTLLYNVVRNKIESEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNESYETLVPSALYRSHGIDHLTIPTRDYCFAPKFADISRAVDFIHKNASYGKTTYVHCKAGRGRSTTIVLCYLVKYKDMTPIGALDFVRMRRPRVLLAPSQWEAVKEYSNRLPTTGAYSPSRDAVLVTKADLEGYYANGNDFSGKELAIIPKVAKTKPMIARLSCLFASLKVNGGSSVTRRMPVPEARAC 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5871123 5872997 + BLOR00533 Blo01g00533 54973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00533 282 CDD PTPMT1 59 203 IPR044596 GO:0004721
Blo01g00533 282 PANTHER OS01G0739200 PROTEIN 14 282 - -
Blo01g00533 282 PANTHER - 14 282 - -
Blo01g00533 282 Pfam Dual specificity phosphatase, catalytic domain 81 202 IPR000340 GO:0008138|GO:0016311
Blo01g00533 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Blo01g00533 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 202 IPR029021 -
Blo01g00533 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Blo01g00533 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Blo01g00533 282 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Blo01g00533 282 Gene3D Protein tyrosine phosphatase superfamily 59 207 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00533 Blo-Chr1:5871123 Blo03g00441 Blo-Chr3:13693147 8.21E-98 dispersed
Blo01g00533 Blo-Chr1:5871123 Blo04g00349 Blo-Chr4:2735410 3.68E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00533 - - mnt:21390393 437.573