Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00576 ATGGCTATGGCCATTTCCTCCGCTGCACTTACTACTCTCTCCACCAGAAAATCCTTTCCGGCGAAAGAAATTACTAGCTTGCAGGGAAGAAGGAGTGTAAAATTAAATGCGAAGAAAGGGGTTTCGAGTGTTTGCGAGCCGCTTCCTCCGGATAGACCATTGTGGTTTCCTGGAAGTTCTCCGCCTGAGTGGCTCGACGGCAGCCTTCCTGGCGATTTCGGCTTCGACCCACTTGGACTTGGCTCTGATCCAGAACTATTGAAATGGTTTGCCCAAGCTGAGCTGATGCATGGGAGATGGGCGATGCTAGCAGTTGCTGGAATCCTAGTTCCAGAATGCCTAGAAAGGTTAGGCTTCATCGAAAACTTCTCATGGTACGAAGCGGGTTCTAGAGAGTATTTCGCAGACCCAGTGACCTTATTGGCGGCGCAATTACTATTAATGGGCTGGGTTGAAGGAAGAAGATGGGCAGACATGATTAATCCAGGCAGTGTAGACATCGAATTCAAATTGCCGCATAAGAAGAACCCCATTCCAGACGTTGGTTATCCTGGTGGGTTCTGGTTTGATCCGTATATGTGGGGAAGAGGATCGCCTGAGCCAGTTATGGTGTTGAGGACTAAAGAGATCAAAAATGGCCGCCTTGCTATGCTTGCTTTTGTGGGTTTCTGCTTCCAAGCTGTCTACACTGGCCAAGACCCCATCGACAATCTGATGGCTCACCTTGCCGATCCCGGCCACTGCAATATCTTTTCGGTAATTTTACTCTTCCCTAGAATATACTCCATGGGAGAGAAAATGTAG 804 48.63 MAMAISSAALTTLSTRKSFPAKEITSLQGRRSVKLNAKKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVAGILVPECLERLGFIENFSWYEAGSREYFADPVTLLAAQLLLMGWVEGRRWADMINPGSVDIEFKLPHKKNPIPDVGYPGGFWFDPYMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGQDPIDNLMAHLADPGHCNIFSVILLFPRIYSMGEKM 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6296913 6298024 - BLOR00576 Blo01g00576 55016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00576 267 SUPERFAMILY Chlorophyll a-b binding protein 51 254 - -
Blo01g00576 267 Pfam Chlorophyll A-B binding protein 61 227 IPR022796 -
Blo01g00576 267 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 254 - -
Blo01g00576 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 254 IPR001344 GO:0009765|GO:0016020
Blo01g00576 267 Gene3D Chlorophyll a/b binding protein domain 62 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00576 Blo-Chr1:6296913 Blo07g01231 Blo-Chr7:32374725 4.30E-69 dispersed
Blo15g00783 Blo-Chr15:26712554 Blo01g00576 Blo-Chr1:6296913 1.50E-45 dispersed
Blo01g00576 Blo-Chr1:6296913 Blo09g00381 Blo-Chr9:14647042 1.75E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00576 K08908 - tcc:18588251 449.899