Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00578 | ATGGCGGTGGCGGTAAAAAGCAGTCGGATGACAGTGGCTGGGGAGTCTAATAAGATGAAGCGAAAAAAAGAAGATGAAGAAAGTGATATATTCGCTTCTTGCACTTTCTCCAGTCTGGGTTTGCATTCTACTTTATGCGACCAGCTTCGAGATAGAATGGGGTTTGAAGCTCCGACTCTCGTTCAAGCTCAGTCAATTCCGGTTATTCTCTCTGGGCGTCATGTACTTGTTAATGCCCCCACTGGCACTGGAAAAACGGTTGCCTATCTCGCTCCAATTATCCATCTTTTGCAACAGTATGATCCTCGAATTCAAAGGTCTGACGGAACATTTGCGTTGGTTCTTGTACCAACACGGGAGCTCTGTACCCAAGTTTATGAAATTCTGCAGAAACTTTTGCACCGTTTTCATTGGATTGTTCCAGGATATATAATGGGCGGTGAAAACAGGTCAAAAGAAAAGGCCAGACTGCGCAAAGGCATATCCATCCTCATTGCAACACCTGGGCGCCTCTTGGATCACTTAAAGAATACATCATCATTTGTGTACATAAATTTGCATTGGATAATATTTGATGAAGCTGATAGGATTTTAGAATTGGGATTTGGCAAAGAAATAGAAGAAATACTTGATCATTTGGGTTCGAGAAGTGTTTGTGCTAACAAGGAGAATTCAGCTTCAAGTTTCAAATTTGAAAGGCAAAATTTACTACTATCAGCTACCTTGAATGACAAAGTAAATCATCTGGCTGAAATTAGTTTAGAAAATCCAGTTATGATAGGTCTTGAGGATGCAGATCATATTCCAGTACTTAAATATAATGGGTCCGTAGAATTTGGAATGAAAGATGAAGCACCAGATGTGGCAGAAAGTTTGAGCTGTTCAATTGGAGATTATAAAATACCAACTCAATTAGTTCAGAGATATGTGGAAGGGTTTTCTAACTCATGGTTGTGTTCGGGTTGGTGTTTCGCCGGATTTGTGGCTTTTCTATTTCCGTTTGTGTGTTATTTTGGTCGTTTTATTTCAATGGAGTCGTTTTATCCCCATCTGCCCAACTTAGACGAGAAGCTAAACCTCATCACAAAGCCTGGCAGATTTGAGGTCGCTGAGGATGGTGTCACAACTACATATAGGAAGGTATGGACCCGCAGAGTTCCTTGCGGCTCTCGCCTCGCGGTGCTTCTTTCTATTCTGAAATCCCTGTTTGAGAGAGACTCCTCCCAAAAGGTTGTGGTATTCTTTTCAACATGTGATGCAGTCGATTTCCATTATGCTCTATTGAGTAATTTCAAATTCTCGCCTTCTATGGAACCAGAAGCAGAACATACACAAACATTTCTTAGATGCAAGACTTTCCGATTACATGGAAATATGAAGCAAGAGGATCGACGGACTACATTTCAGACATTTAAATCGGAGAAGTTGGCTCTTCTGTTGTCCACAGATGTTGCTGCTAGAGGACTTGATTTTCCAAAAGTTAGATGTATTGTACAGTATGACACTCCAGGAGAGTCAACTGAGTATGTTCACAGGGTTGGAAGAACTGCTCGATTAGGTGAAAGAGGAGATTCATTATTATTTTTACAACAAGTTGAAATAGATTATTTGCAAGATTTGGAGAAACATGGTGTATTGCTGACGGAATATCCTCTTGCGAAAGTGTTGGATAGCCTTCCTTCATATGCTACTCAGAGAAAACAGGATTTGAAATTCCTCTCCTTGGATTTGCATCCCCGGCTACTCTCTTTGCACAGAGCACTAGAATCTTACGTGTCTGCTGAGCCAAGGGTGATGAAGTTGGCCCAGAAGGCATTTTGCTCTTGGGTTCGTGCTTACACAGCCCATCGAGGGGAGTTGAAAAGATTCTTTACAGTGAAGAAACTTCACCTGGGGCATGTTGCTAAAAGTTTTGCACTGAAAGAACAGCCATCTTTGGTGGGGAAATCATTCCAAAAGGAAGCCAAGAAAAGGAAGAGGGAACAGAGGATGCATGGAGTTTCAGCAAAAAGGAGGAAAGTTGGCACCAAAAGAGGGAGGTTTCGTTTGAACTCGCCGGCAAATGGTGATTTTCCTGAATCTGCACTTCTAGTTTTTGGAGAAAAGAAGAACATCAACTCAGAGTTGTGGCATGCCTGCGCGGGACCGCTGGTTTCTTTACCTCCGGTCGGGAGCCTTGTAGTTTACTTTCCCCAGGGCCATAGTGAGCAGGTTGCAGCATCGATGCATAAGGAGACCGATTTTGTGCCCAACTATCCTAACCTTCCTTCCAAGTTGATTTGTATGCTCCATAACATCACATTACATGCTGATGTCGAAACTGATGAAGTCTACGCACAAATGACCCTTCAGCCTGTAACCAAATATGACAAGGAAGCTTTACTGGCATCTGATATAGGCCTCAAGCAAAGCCGGCAACCCGCTGAGTTCTTTTGTAAAACTCTTACAGCTAGTGACACGAGCACTCATGGTGGATTTTCTGTACCTCGTCGAGCGGCTGAAAAGATCTTTCCAGCACTAGATTACTCGATGCAACCCCCTGCTCAGGAGCTTGTCGCTCGAGATCTACACGATACTTCATGGATATTCAGACATATTTACCGTGGCCAACCTAAAAGACATCTGTTGACTACTGGCTGGAGTGTTTTTGTCAGTACAAAACGTCTCTTTGCCGGAGATTCTGTTCTTTTCATAAGAGATGAAAAATCACAGCATCTCCTAGGCATACGGCGGGCTAATAGGCAGCAGCCAGCTCTCTCTTCGTCTGTGATTTCTAGCGATAGCATGCACATTGGAATTCTCGCTTCTGCGGCCCATGCTGCATCGAATAATAGTCCGTTCACTATATTTTATAATCCTAGGGCGAGTCCTTCTGAATTTGTAATTCCCTTGGCCAAATACAATAAAGCAATGTACACCCATGTTTCCCTCGGCATGCGATTTCGAATGATGTTTGAGACGGAGGAGTTAGGGGTGCGTAGATACATGGGTACGATAACTGGTATTAGCGACTTGGATTCTTTGCGATGGAAAAGCTCACAATGGCGTAATCTTCAGGTTGGATGGGACGAATCAGCAGCTGGTGAAAGGCCCAGCCGAGTCTCCATTTGGGAAGTCGAGCCGGTCATAACTCCGTTTTACATTTGCCCGCCTCCATTTTTTAGACCCAAATTACCCAAACAGCCGGGAATGCCAGATGATGAATCCGAAATCGAAATCGCTTTCAAACGAGCTGTGCCGTGGCTTGGAGATGATTTTACCATGAAGGACACCCAGAGCCCGATTTTTCCCGGTCTTAGTCTGGCTCAGTGGATGAGTATGCAGCAAAATAATCAGTTTCCATCAGCTCAAGCCGGATTTTTACCATCAATGGTCTCCCCAAACGCCCATTCCCTGCATAATGCTTTAACCACTGATGATCCATCGAAATTACTGAGTTTCCAAACTCCGGTACTATCTTCACCTACTCCTCCCTATAATAAATCTAATCAGCAAGGCCAAGTTAGCCAATTGCAGCAGCCATCCTCTGCATGGCCCCAACAGCCCCACCAACAGCATCAGCCTCAGCCTCTGTCACAGGCGCAGCCATTATTGCAGATTCCAACCAGCCAACAGCTACATCGGCAGCAGCCACAGCACCAACAAAGCAAGCAAATTCTACCTCAACAACAGCTTTGCCAACCATCTCCTTCAAATAATAATGGTTTTGTTGGTAATCAGACGCAAAATCAAAATTTGCAGCAGCTGGTGGTGTCCTCTCAGCTTCAGCAACAGCAGTTGCTGGCCGGCAATGGCCAAACCCAGCAAAATATGAATAGATCATTTCAGATGACATCCTTACCACAAGATTCCATTTTTCAGCAACAAATGGAACAGCAAACCAACCTCGTTCCTAGGAATCAGCAACAACCTGGCCTTTCACAAAGAGCACAACAGACTCAACCAGTTCAACAGTTGCCTCAACAAACGCCTTTAGACCACCAACTTCATTTACAGATGCTCCAGAAATTACAGCAGCAGCAACAGCAGTTGCTCTTTCCAGCAAACCCATTATTACAGTCTCAGCTAGTACAGCTTCAGCAGAGCCATCATCAAAACCACCCACAACAAAACACCAATGCCTTTTCGACTTCGGGCCTTCTGCAGTCTCAACATATTCCTACGAACCAGCCCCGGCCCAAGGGCGGCCAATTCAAGCCTCTCAATGCCATCAGAGCTCAGTCTATGACGGATGGTGATGCCCCATCTTGCTCAACTTCACCTTCCACCAATAATTTCCATGTTTCAACATCAAATATTTTGAACAGAAAGCAAGGGCCAGTCACTCTAGCAGAATGTTCAGTTGTTGAGCCTTCAAACAATCTACTTCCGGAACTTCAAAGCAAATATGATAGCCGAATCAAACATGAATTTCCATGTGAGAAAGGACCAGATCTAATCAAATACAAAAACCCAATCACTGAGCAGTTAGAAGCATCCTCTTCTGGAACATCATACTGCCTAGATGCTGGCCCAACACAGCAGCCTATTCCACTTCCTGTCAGTTTAGACAATGATGTCCATTCCCATCATCGGATGAACGTTCCTTTCACGAGTAACATCGATGGGTTGATGCCGGAATCTTTGTTGTCGAGAGAATATGACTCTCAAAACTTACTTTCTAACTACACTAGCCTTCCAAGAGATATCGAGACAGAGTTGTCTAGTGCGCCAATCAGCCCACAGCCATTTGGAGTGCCAAACATGCCTCTGAAGCCCGGCTGCTCAAATGACGTCCCGATAAATGATTCTGGAGCCATGGGCGGCGGGTTGTGGCCAAATCATAGTCAACGCTTGCGGACCTATGCAAAGGTTCAAAAGCGCGGTTCTGTAGGAAGATGTATTGATGTGACCCGTTACCGAGGATATGGAGATTTAAGGTGTGATCTTGCCCGCATGTTTGGGATTGAAGGGCAGCTAGAAGACCCTCAAAGAACCGATTGGAAGCTTGTTTACGTAGATCACGAAAATGACATACTCCTTGTCGGAGATGATCCGTGGGAAGAGTTTGTGAGCTGTGTTCAGAGCATAAAAATACTTTCGTCCGGTGAAGTACAGCAAATGAGTTTGGACGGAGATTTGGGTCAAATTCAAATTCCGAATCAAGCGTGTAGTGGGACAGACAGTGGACATGCGTGGAGAGACGACCATTCAGCAGCTTCCTTCAATAGATAG | 5214 | 44.55 | MAVAVKSSRMTVAGESNKMKRKKEDEESDIFASCTFSSLGLHSTLCDQLRDRMGFEAPTLVQAQSIPVILSGRHVLVNAPTGTGKTVAYLAPIIHLLQQYDPRIQRSDGTFALVLVPTRELCTQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYINLHWIIFDEADRILELGFGKEIEEILDHLGSRSVCANKENSASSFKFERQNLLLSATLNDKVNHLAEISLENPVMIGLEDADHIPVLKYNGSVEFGMKDEAPDVAESLSCSIGDYKIPTQLVQRYVEGFSNSWLCSGWCFAGFVAFLFPFVCYFGRFISMESFYPHLPNLDEKLNLITKPGRFEVAEDGVTTTYRKVWTRRVPCGSRLAVLLSILKSLFERDSSQKVVVFFSTCDAVDFHYALLSNFKFSPSMEPEAEHTQTFLRCKTFRLHGNMKQEDRRTTFQTFKSEKLALLLSTDVAARGLDFPKVRCIVQYDTPGESTEYVHRVGRTARLGERGDSLLFLQQVEIDYLQDLEKHGVLLTEYPLAKVLDSLPSYATQRKQDLKFLSLDLHPRLLSLHRALESYVSAEPRVMKLAQKAFCSWVRAYTAHRGELKRFFTVKKLHLGHVAKSFALKEQPSLVGKSFQKEAKKRKREQRMHGVSAKRRKVGTKRGRFRLNSPANGDFPESALLVFGEKKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKETDFVPNYPNLPSKLICMLHNITLHADVETDEVYAQMTLQPVTKYDKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDYSMQPPAQELVARDLHDTSWIFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQHLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMYTHVSLGMRFRMMFETEELGVRRYMGTITGISDLDSLRWKSSQWRNLQVGWDESAAGERPSRVSIWEVEPVITPFYICPPPFFRPKLPKQPGMPDDESEIEIAFKRAVPWLGDDFTMKDTQSPIFPGLSLAQWMSMQQNNQFPSAQAGFLPSMVSPNAHSLHNALTTDDPSKLLSFQTPVLSSPTPPYNKSNQQGQVSQLQQPSSAWPQQPHQQHQPQPLSQAQPLLQIPTSQQLHRQQPQHQQSKQILPQQQLCQPSPSNNNGFVGNQTQNQNLQQLVVSSQLQQQQLLAGNGQTQQNMNRSFQMTSLPQDSIFQQQMEQQTNLVPRNQQQPGLSQRAQQTQPVQQLPQQTPLDHQLHLQMLQKLQQQQQQLLFPANPLLQSQLVQLQQSHHQNHPQQNTNAFSTSGLLQSQHIPTNQPRPKGGQFKPLNAIRAQSMTDGDAPSCSTSPSTNNFHVSTSNILNRKQGPVTLAECSVVEPSNNLLPELQSKYDSRIKHEFPCEKGPDLIKYKNPITEQLEASSSGTSYCLDAGPTQQPIPLPVSLDNDVHSHHRMNVPFTSNIDGLMPESLLSREYDSQNLLSNYTSLPRDIETELSSAPISPQPFGVPNMPLKPGCSNDVPINDSGAMGGGLWPNHSQRLRTYAKVQKRGSVGRCIDVTRYRGYGDLRCDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSGEVQQMSLDGDLGQIQIPNQACSGTDSGHAWRDDHSAASFNR | 1737 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6319798 | 6337150 | - | BLOR00578 | Blo01g00578 | 55018 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00578 | 1737 | ProSiteProfiles | B3 DNA-binding domain profile. | 811 | 913 | IPR003340 | GO:0003677 | |
Blo01g00578 | 1737 | CDD | SF2_C_DEAD | 395 | 529 | - | - | |
Blo01g00578 | 1737 | Pfam | Domain of unknown function (DUF4217) | 585 | 645 | IPR025313 | - | |
Blo01g00578 | 1737 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 700 | 1727 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Blo01g00578 | 1737 | SUPERFAMILY | DNA-binding pseudobarrel domain | 801 | 940 | IPR015300 | - | |
Blo01g00578 | 1737 | Pfam | DEAD/DEAH box helicase | 60 | 248 | IPR011545 | GO:0003676|GO:0005524 | |
Blo01g00578 | 1737 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 34 | 63 | IPR014014 | GO:0003724 | |
Blo01g00578 | 1737 | Pfam | Helicase conserved C-terminal domain | 397 | 520 | IPR001650 | - | |
Blo01g00578 | 1737 | Gene3D | - | 389 | 671 | IPR027417 | - | |
Blo01g00578 | 1737 | Gene3D | - | 809 | 912 | IPR015300 | - | |
Blo01g00578 | 1737 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 398 | 578 | IPR001650 | - | |
Blo01g00578 | 1737 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 30 | 260 | IPR027417 | - | |
Blo01g00578 | 1737 | ProSiteProfiles | PB1 domain profile. | 1613 | 1706 | IPR000270 | GO:0005515 | |
Blo01g00578 | 1737 | Gene3D | - | 4 | 262 | IPR027417 | - | |
Blo01g00578 | 1737 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 190 | 198 | IPR000629 | - | |
Blo01g00578 | 1737 | PANTHER | AUXIN RESPONSE FACTOR 19 | 700 | 1727 | - | - | |
Blo01g00578 | 1737 | CDD | DEADc_DDX31 | 45 | 261 | - | - | |
Blo01g00578 | 1737 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 66 | 260 | IPR014001 | - | |
Blo01g00578 | 1737 | Gene3D | - | 974 | 1044 | - | - | |
Blo01g00578 | 1737 | Gene3D | - | 1608 | 1702 | - | - | |
Blo01g00578 | 1737 | SMART | helicmild6 | 442 | 520 | IPR001650 | - | |
Blo01g00578 | 1737 | Pfam | AUX/IAA family | 1624 | 1699 | IPR033389 | - | |
Blo01g00578 | 1737 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Blo01g00578 | 1737 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 72 | 549 | IPR027417 | - | |
Blo01g00578 | 1737 | CDD | B3_DNA | 810 | 906 | IPR003340 | GO:0003677 | |
Blo01g00578 | 1737 | Pfam | B3 DNA binding domain | 811 | 912 | IPR003340 | GO:0003677 | |
Blo01g00578 | 1737 | SMART | ultradead3 | 54 | 271 | IPR014001 | - | |
Blo01g00578 | 1737 | SMART | DUF4217_3 | 583 | 648 | IPR025313 | - | |
Blo01g00578 | 1737 | Pfam | Auxin response factor | 937 | 1019 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Blo01g00578 | 1737 | SUPERFAMILY | CAD & PB1 domains | 1626 | 1691 | - | - | |
Blo01g00578 | 1737 | SMART | B3_2 | 811 | 913 | IPR003340 | GO:0003677 | |
Blo01g00578 | 1737 | MobiDBLite | consensus disorder prediction | 1146 | 1240 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g00578 | Blo16g00853 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00578 | Blo-Chr1:6319798 | Blo08g00438 | Blo-Chr8:8805932 | 0 | dispersed | |
Blo06g00863 | Blo-Chr6:31895231 | Blo01g00578 | Blo-Chr1:6319798 | 3.55E-26 | transposed | |
Blo16g00854 | Blo-Chr16:35968974 | Blo01g00578 | Blo-Chr1:6319798 | 2.48E-170 | transposed | |
Blo01g00578 | Blo-Chr1:6319798 | Blo16g00853 | Blo-Chr16:35921520 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11863 | PF00270 | DEAD | 2.30E-41 | CL0023 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00578 | - | K14486 | csv:101210917 | 1308.12 |