Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00582 ATGGATGAAAACGGGGGCCACAAGTTGAGGGGAATAAGGCAGATCGTCAGGCTCAAGGAACTCCTGCAAAAATGGCAGTCTGTGACGCTTGGTTCAAAGCCCAACTCTCCGACCAACGAAAACCAAGTAGGCTCCATTTCTCATCCCTCCATTAACAAAAGGCTCACGACTGTGGTATGTTGTGATTTAGACGAGGACAGCTGCCAGAGCCCTGAGCATTCACACTCAGACATCCCCAGAGGATATCTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTTATCATCCCCACCACCTATCTTAGCCATTCTCTCTTCAAGTTGTTGCTTGAAAAGGTCGAGGAGGAGTTTGGATTTAATCACAGCGGCGGCCTGACCATCCCTTGTGATATTGAGACTTTCAAGTTTTTAATGCAATGCATGGAAAACCATCACAATTCTCTTACTGATCAAAGTGACGATACAAATCCAGGTATGCCTCCTTCATCCATTTTATCTAGTGTAGTGTAA 510 46.47 MDENGGHKLRGIRQIVRLKELLQKWQSVTLGSKPNSPTNENQVGSISHPSINKRLTTVVCCDLDEDSCQSPEHSHSDIPRGYLAVYVGPELRRFIIPTTYLSHSLFKLLLEKVEEEFGFNHSGGLTIPCDIETFKFLMQCMENHHNSLTDQSDDTNPGMPPSSILSSVV 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6383062 6383571 + BLOR00582 Blo01g00582 55022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00582 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 147 IPR003676 GO:0009733
Blo01g00582 169 PANTHER AUXIN-INDUCED PROTEIN 15A 7 147 - -
Blo01g00582 169 MobiDBLite consensus disorder prediction 147 169 - -
Blo01g00582 169 Pfam Auxin responsive protein 59 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00582 Blo-Chr1:6383062 Blo05g00826 Blo-Chr5:30000769 7.30E-21 dispersed
Blo01g01715 Blo-Chr1:56889280 Blo01g00582 Blo-Chr1:6383062 6.12E-28 dispersed
Blo01g00582 Blo-Chr1:6383062 Blo01g00583 Blo-Chr1:6387289 2.92E-06 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00582 K14488 - cpap:110808074 219.55