Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00591 ATGGGTTCTACTTCTCTTCTTTATTTCCTTCTTTTTCTACTCTTAATTTCAGAGTCGTCTCAAGGGATTCGATTGGACGAAGGACTGAAGCCATCTTTGCAGAAGAAAAGCCATGGCCATGAAAGTTCGTTAAGCAGAGGTAGTATGGATACTGCTTCAGAGATCATTCTCTGTAACCATGGCCACTGTGCAGGAAAGCATAGAAACCTTGCCAGTGTCACAACTATTTCTACACTCGTTATTCCAAAGGCTATGGGAAACAACGTTGTTGATGAAATGCCCACAAGTAAAGGATTTGATGGTTCTGAAACTACTATCGAGATCAAGATTAAAACTCTGGATGCTCAAACATATACTCTGAGAGTAGATAAGCAGATGCCCGTTCCTGTTTTGAAAGAGCAAATTGCTTCTGTAACTGGCGTGTTATCAGAGCAACAACGCCTTATATGCAGAGGAAAAGTTCTCAAGGATGATCAACTTCTTTCTGCATATCATGTTGAAGATGGTCACACCTTGCATATGGTTGTCAGACAACCACTTACGCCATCTGAGTCTCTACTGAATAATTCAGTATCTGAACCAAATCCAAGTTCAAGCCAAGGATTTAGTCACCAGGTAGCCCCTGGAGTTGTAATTGAAACTTTCAGTCTGCCTATGCAAGGAGATGGTGTTCCTCCTGAAATCAATCGAATTGTATCAGCAGTCCTTGGTTCTATTGGACTTTCCAATATGGTTAGTGGCAGCACAGTGCCTGAAGTCAGGGAACATGGTCGGCAAAGACAAGAAAGTACATCAGGTGCTAGTAATTCGGTAGACGCAAACCAGCATCAATCTGTTGAAGCCGGAAGCTATGGTTCTCTTGGGCAATCAACGGCTGCTTCTTTAGGGTCCATGCTGCCCCCTATAATTCCTGATTCTTTGACAACTTTGTCTCGTTATATAAATCATATGAGGAGCGAATTTGATGCTGCAGGTCAAGATAGGGGAAATGCTGTTCAAGCACCATCTGAACATGCATCCGAAGGAAGAGGCTCCAATTCTGGAATGATACAAGAAGGGTTGCCAACACCTGCATCATTGGCCGAAGTTATGCTTTCCACTAGACAAATTCTTGTAGAAGCAGCTGGAGAATGTCTACTTCAACTTGCAAGGCAACTGGAGAATCAAGTGAATGTGACAGATCCTACTGCTCGGTTACAAACGCAGTCTAGTGCGTGGAGAACTGGAGTCCTGTTTCATAACTTAGGTGCACTACTCCTTGAACTTGGCCGTACTGTCATAACTTTAAGAATGGGTCAAAGTCCTTCTGAAGCTGTTGTTAATGCTGGACCAGCAGTTTTCATATCACAATCTGCTCCTAATCCCATTATGGTTCAGGCACCTCTTCCTTTCCCAACGAGTTCAAACTCAAGCACCATTCCTTCTGGAATGATGCATCCTGGCTCCAGTTCAATACCCGGTCTTGGGGCTGGCTTTCTTCCAAGGAGAATCGACATACAAATACGAAGAGGTTCATCAACTACACCAAATAGTAATAGAGAGGAGCATAACAGTGGCCAACATCCTTCAGGCCAAAGAGAGTCGGTTATTGGCGCTGGTGAAAATCTTGATAATCAAGCAAATACTAGGCTCTCAGATGACCCTTTTTTGGCTGGAGAATCAGGAGTACGTGTTGTACCAGTTAGGACCATGATTGCAGCCATGCCAGGTCCATTTTCTCGTTCACCTTTAGATTCCTCCAATAACTCAATTGGGTTATACTATCCTCTTCTTGGAAGATTTCAACAACCGGCTTCGGGATTGGCAAATGTTGAACAAGGAAGTGAAGCGTCTGGAGAACGGGGTTCCAATGGCCCTCAAGCTGTGCACAGCTCTGTTTCTAACGTTGTTGTCCAGCAAATTAGCGTCGAAAATCTTGTGAGAAATGCTAGTGGAACCCAAAACATCCAAGATTCCAATAGAGAACTTCCAGAGAGTGTCGTTAACTTTCTGAGGACAGCCTTTCCAAATGGTGAAATTAGCCCAGAATCTGCAAGCATATTGGAAGCTGATGTGGATTTTATTCCGGAGCATGAGACAACGTCAAATGCAGCTGTAGATACACAGGAATCAGAATCTGGAGCAAGTGATGAAGGCATTTTTTTGTCTAATATACTTCGGCAAATTATGCCTCACATCTCACAGCAAATAGAGGCCGAGCACGCGGAGGAGAGTATTTCAGAGCACATAAGATTTCCAGATTCTTCCACACAGAATGAGATAAGTGGAATTGGAAATGAAGCTGCAATTGTGTTGCATTCTGTCTCAGCAATTCTACACGAGGAGGGCAATGAGGACCTCCGTTCATTATGTCAATCCACTAGTGATGAAGACATCGACATGGCCGAGAGTAGGCCTAGACGCCCACCACAAGCACAATACACATTCGTTGGTATAAGCCTTGACAAAAAGTACAGTTCATTGAATAAAATTAGAGAAGAAATTGTTGATCATGCATTGAAGAATGGCTCCAAGAAAGTTTCGAAGGGAAAGAGACCTGGAAAAGGAGGAAACCGATTCTATAAGAGTATAGGATTGGGATTTAAGACTCCCAGAGAAGCTATTGAAGGTACATATATTGATAAGAAATGTCCCTTCACTGGAACTGTTTCTGTCAGGGGTCGTATTTTAGCTGGCACATGTCACAGTGCTAAGATGATAAGGACCATTATTGTTCGCAGGAATTATTTACATTTTGTTAAAAAATACCAAAGGCATGTTTTCTATCTTGACTATCTTTTTTATTATTTTGGGGAAACCATGGTTTCTTTTCTTGTATGTATTTCTTACATTGCTTCATGTAGGTATGAGAAGAGACATTCTAACATTCCGGCACACATTTCCCCATGTTTTCGAGTGAAGGAGGGTGATCATGTTATAATTGGACAATGCAGGCCTTTGTCGAAGACTGTGAGGTTCAATGTGCTGAAAGTTATCCCCGCTGGATCTTCTGCTGGAGGGAAAAAAGCTTTTACGGGAATTTATCGTTTGATCTCTAACAATACGAATAAAAAGGTCGAAGAAGAAGCTTGTAACTTGCTGGGAAGCATTTCGGAAGAAACCACAGTTTTAGACGGAAAACAGACCCCATTTAGTTATCTCCCAACCCTTCGATTGGGAGAGTGGTCGGACATTGGTGGCCGTCCTTATATGGAGGATACTCATATATGCATCACTGACTTGGGTAAGAAGTTCGGCTCTAATTCGCTTGTTGAGGAAGTTGTCTCCTTTTATGGTGTATTTGACGGTCACGGAGGAAAAGGAGCAGCCCATTTTGTCCGAGATCACTTGCCGAGAGCCATTGTCGAAGATGCTGACTTTCCTTTCAAGCTCGAGAAGGTTGTTACGAGGTCATTCATGGAGACTGATATTGCATTTGCAAAGAGATGTTCTATTGAGCCTTCATTGTCATCTGGTACAACTGCTCTAGCTGCAATAATATTTGAAAGGTCTTTGTTAGTAGCAAACGCTGGGGATTGTCGAGCCGTATTGTCGAGAGGTGGAAACACAATAGAAATGTCAAAAGACCACAGACCCTGCTGCATGAAAGAAAGAACACGAATCGAGGCCTTGGGCGGGTACATAGACGATGGTTATGTAAACGGCCAATTAGGCGTGACTCGAGCATTAGGAGATTGGCACCTCGAAGGGATGAAAGGAACAGGTGAAAAAAGCGGACCGTTAATTGCCGAACCAGAGGTAAAATTCACGACGCTGACAAAGGGAGACGAGTTTCTTATAATCGGTAGCGATGGAATATGGGACGTTTTTACGAGCCAGAATGCTGTAGATTTTGCTAGGAAGAGACTTCAAGAGCACAATGATGTGAGACTGTGTTGCAAGCAAGTGGTGGAAGAGGCCATTAAAAGAGGGGCTGTGGACAATTTGACAGTTGTGTTGGTGAGCTTTCAGTTGGAGCCACCTTTACAAATGGAGAGTAGTCCCAGGGCAGCAAGAGTGAGGAGAAGCATTTCTGCTGAGGGGCTGCAAAATCTCAAGTGTCTTTTAGATGGACAGAATCAAGAGGCCTTGCATTCTCAATTGACCTGA 4089 43.34 MGSTSLLYFLLFLLLISESSQGIRLDEGLKPSLQKKSHGHESSLSRGSMDTASEIILCNHGHCAGKHRNLASVTTISTLVIPKAMGNNVVDEMPTSKGFDGSETTIEIKIKTLDAQTYTLRVDKQMPVPVLKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMVVRQPLTPSESLLNNSVSEPNPSSSQGFSHQVAPGVVIETFSLPMQGDGVPPEINRIVSAVLGSIGLSNMVSGSTVPEVREHGRQRQESTSGASNSVDANQHQSVEAGSYGSLGQSTAASLGSMLPPIIPDSLTTLSRYINHMRSEFDAAGQDRGNAVQAPSEHASEGRGSNSGMIQEGLPTPASLAEVMLSTRQILVEAAGECLLQLARQLENQVNVTDPTARLQTQSSAWRTGVLFHNLGALLLELGRTVITLRMGQSPSEAVVNAGPAVFISQSAPNPIMVQAPLPFPTSSNSSTIPSGMMHPGSSSIPGLGAGFLPRRIDIQIRRGSSTTPNSNREEHNSGQHPSGQRESVIGAGENLDNQANTRLSDDPFLAGESGVRVVPVRTMIAAMPGPFSRSPLDSSNNSIGLYYPLLGRFQQPASGLANVEQGSEASGERGSNGPQAVHSSVSNVVVQQISVENLVRNASGTQNIQDSNRELPESVVNFLRTAFPNGEISPESASILEADVDFIPEHETTSNAAVDTQESESGASDEGIFLSNILRQIMPHISQQIEAEHAEESISEHIRFPDSSTQNEISGIGNEAAIVLHSVSAILHEEGNEDLRSLCQSTSDEDIDMAESRPRRPPQAQYTFVGISLDKKYSSLNKIREEIVDHALKNGSKKVSKGKRPGKGGNRFYKSIGLGFKTPREAIEGTYIDKKCPFTGTVSVRGRILAGTCHSAKMIRTIIVRRNYLHFVKKYQRHVFYLDYLFYYFGETMVSFLVCISYIASCRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKKAFTGIYRLISNNTNKKVEEEACNLLGSISEETTVLDGKQTPFSYLPTLRLGEWSDIGGRPYMEDTHICITDLGKKFGSNSLVEEVVSFYGVFDGHGGKGAAHFVRDHLPRAIVEDADFPFKLEKVVTRSFMETDIAFAKRCSIEPSLSSGTTALAAIIFERSLLVANAGDCRAVLSRGGNTIEMSKDHRPCCMKERTRIEALGGYIDDGYVNGQLGVTRALGDWHLEGMKGTGEKSGPLIAEPEVKFTTLTKGDEFLIIGSDGIWDVFTSQNAVDFARKRLQEHNDVRLCCKQVVEEAIKRGAVDNLTVVLVSFQLEPPLQMESSPRAARVRRSISAEGLQNLKCLLDGQNQEALHSQLT 1362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6502672 6532397 + BLOR00591 Blo01g00591 55031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00591 1362 Pfam Ubiquitin family 108 178 IPR000626 GO:0005515
Blo01g00591 1362 SUPERFAMILY Nucleic acid-binding proteins 948 1015 IPR012340 -
Blo01g00591 1362 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 85 644 - -
Blo01g00591 1362 ProSiteProfiles Ubiquitin domain profile. 106 179 IPR000626 GO:0005515
Blo01g00591 1362 Gene3D - 828 1006 - -
Blo01g00591 1362 MobiDBLite consensus disorder prediction 503 528 - -
Blo01g00591 1362 SMART ubq_7 106 177 IPR000626 GO:0005515
Blo01g00591 1362 ProSiteProfiles PPM-type phosphatase domain profile. 1051 1316 IPR001932 -
Blo01g00591 1362 MobiDBLite consensus disorder prediction 247 273 - -
Blo01g00591 1362 MobiDBLite consensus disorder prediction 184 203 - -
Blo01g00591 1362 Gene3D - 1037 1319 IPR036457 -
Blo01g00591 1362 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 85 644 - -
Blo01g00591 1362 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 642 759 - -
Blo01g00591 1362 Gene3D - 100 195 - -
Blo01g00591 1362 SMART PP2C_4 1041 1314 IPR001932 -
Blo01g00591 1362 Pfam Ribosomal_S17 N-terminal 836 890 IPR032440 -
Blo01g00591 1362 MobiDBLite consensus disorder prediction 600 624 - -
Blo01g00591 1362 ProSitePatterns Ribosomal protein S17 signature. 969 981 IPR019979 GO:0003735|GO:0005840|GO:0006412
Blo01g00591 1362 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 642 759 - -
Blo01g00591 1362 PRINTS Ubiquitin signature 158 179 IPR019956 -
Blo01g00591 1362 PRINTS Ubiquitin signature 137 157 IPR019956 -
Blo01g00591 1362 PRINTS Ubiquitin signature 116 136 IPR019956 -
Blo01g00591 1362 CDD Ubl_ubiquitin_like 108 175 - -
Blo01g00591 1362 Pfam Ribosomal protein S17 892 990 IPR000266 GO:0003735|GO:0005840|GO:0006412
Blo01g00591 1362 MobiDBLite consensus disorder prediction 325 351 - -
Blo01g00591 1362 Pfam Protein phosphatase 2C 1063 1308 IPR001932 -
Blo01g00591 1362 MobiDBLite consensus disorder prediction 503 525 - -
Blo01g00591 1362 ProSitePatterns PPM-type phosphatase domain signature. 1090 1098 IPR000222 GO:0043169
Blo01g00591 1362 SUPERFAMILY PP2C-like 1041 1316 IPR036457 -
Blo01g00591 1362 SUPERFAMILY Ubiquitin-like 101 183 IPR029071 -
Blo01g00591 1362 SUPERFAMILY Nucleic acid-binding proteins 886 924 IPR012340 -
Blo01g00591 1362 CDD PP2Cc 1053 1316 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00591 Blo-Chr1:6502672 Blo18g00040 Blo-Chr18:265747 2.56E-115 dispersed
Blo17g00011 Blo-Chr17:64016 Blo01g00591 Blo-Chr1:6502672 2.16E-83 transposed
Blo18g00755 Blo-Chr18:20832469 Blo01g00591 Blo-Chr1:6502672 1.56E-64 transposed
Blo01g00591 Blo-Chr1:6502672 Blo16g00868 Blo-Chr16:36195200 7.89E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11864 PF00481 PP2C 6.00E-66 CL0238 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00591 K23390 - csv:101210096 742.265