Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00598 ATGTCAGGTTGGGACGAAGGTGCAATCTACTATAGCGATCAGGCTCAGTCTCTCGGAGATGGTTCCAGCGGTGGTCGTATCGGAGATCCAGAATCTGCAGATGCCACAAACTACTCGGTGCTTCGTAAGTTCAAGGAGTTCATCCGAAGCTTTGAAACCAATAAAAATGTCTTCCCCTATAGAGAAAGCCTGCTCCATAACCCTAAATTCCTCTGCGTCGACATGGAAGATCTTAACGCCTTCGATGCTGACCTCCCAGATAAGCTACGGTCTTCTCCCTCCGATTACTTGCCCCTGTTCGAGACTGCAGCAGCAGAAGTTGTGATGAATTTAAGGACGAAGGTAGCAGGAGAGACCGGAGAAATGGTGGAACCAGTGCCTGGAGATGTTCAAATTCTTCTTATTTCAAAGGAGGATCCGGTGTCAATGCGTTCACTTGGGGCTCAATACATATCAAAACTTGTGAAAATTTCTGGAATCACCATTTCTGCGTCAAGGACAAAGGCGAAAGCAACATATGTAACCCTATTATGTAAGAACTGTAGAAGTATGCAAAGAGTTCCCTGCAGGCCAGGACTCGGGGGAGCGATTGTCCCTCGCTCTTGTAATCATGTTCCGCAGGCCGGAGAGGAGCCATGCCCATTGGATCCTTGGATAGTGGTTCCTGACAGGAGCACGTATGTTGATCAACAAACATTAAAATTGCAAGAAAATCCGGAGGATGTTCCAACTGGAGAGCTTCCCAGGAATATGCTTTTGTCAGTTGATCGCCATCTTGTTCAAACGATTGTTCCAGGCACAAGATTGACCATCATGGGGATATATAGTATCTTTCAAGCTGCAAATTCCTCAGCATCCCACAAAGGAGCAGTTGCAGTTAGGCAGCCTTACATCAGGGTTGTGGGAATGGAGGAAGCAAGTGAGGCCAAATCTAGAGGTCCTGCGTCTTATACACCAGAAGAAGTAGAGGAGTTCAAAAAATTTGCTGCAGAACCTGACGTGTACAAAAGCATATGTTCTAAGATTGCCCCCTCCATATTTGGTCATGATGATGTGAAGAAAGCTGTGGCTTGTCTTCTGTTTGGAGGATCTAAAAAGAATTTGCCAGATGGTGTGAAGCTAAGAGGTGATATCAATGTTTTACTTTTAGGAGATCCATCTACTGCTAAATCACAGTTTCTCAAGTTTGTTGAAAAGACAGCGCCCATTGCTGTTTATACTTCTGGGAAAGGTTCCTCTGCTGCTGGCCTTACAGCTTCTGTGATTAGAGATAATAGCTCTCGGGAGTTTTATCTTGAAGGAGGTGCCATGGTTTTGGCAGACGGTGGTGTTGTCTGCATTGATGAATTTGACAAAATGAGACCAGAGGATAGAGTTGCAATTCATGAAGCCATGGAACAGCAAACTATTTCCATTGCTAAAGCTGGAATAACCACAGTTCTTAATTCCAGAACCTCAGTCCTTGCAGCTGCTAATCCTCCGTCTGGACGTTATGATGATCTTAAGACTGCTCAGGATAACATCGATCTGCAGACGACCATTCTTTCTCGTTTTGATTTAATCTTCATTGTGAAAGATATCAGAATGTACAGTCAGGACAAGATTATAGCTAGCCATATAATAAAAGTTCATGCATCAGCTAATTCAACCAAGGGAGAAAATCGAGCTTCCAAAGAGGAGAATTGGCTGAAGAGGTATATACAATATTGCCGAACAGAATGCCACCCACGTTTGTCAGAATCTGCTTCCGTGATGCTCCAGAATAGTTATGTTAAAATCAGACAGGACATGAGGAAGCAGGCAAATGAAACTGGAGAGACTACTCCTATTCCCATAACTGTCAGGCAACTAGAAGCTATTGTCCGGATAAGCGAGGCACTAGCAAAAATGAAATTGTCACATGTTGCCACAGAGGAATATGTGCAAGAGGCTATACGTATATTTACTGTTTCTACTATGGATGCAGCACGGTCTGGGATCAATGATGTAGTAAATCTTACATCAGATATGGCAAATGAGATAAAGCAAGCAGAAACTCAGATCAAGAGAAGAATAGGGATTGGAAACCACATTTCCGAAAGAAGACTGATAGATGAGCTCACCAGAATGGGGTTGAATGAATCTATTGAACAAATACAATGTCCATGTACTGATATTTTAATTTCACGTGACAGGTACGCGGTTCTTGGTGCTGGCTTCGCCGGTCTCTCCGTTGCCTGGCATTTGTTGAAGCACAGTTCTGAGGGGGTAGATCTACATCTTGATATCTACGATGAAATTGGCATTGGTGGCGGTGCATCTGGAGTTTCTGGAGGGCTTCTTCACCCTTATTCTCCAAAAGGTAAACCTCTCCGGTGGGGTGTTGAGTGTTGGAATGAGTGCTTGAAGCTTCTAACCATTGCTGAAGCTGCAGCACAGTCAAACGAGTTGGATTGGGATACTAAAGACGATGGTCAAGTTGTTTGTAGTTCCATAGTAAGGAGAAGGGGCATTTTGAGGCCAGCACTGAGTATGAAGTCTTTGGTGTCATTGAGAGATAATGCTCAGAATTGCATACCCAGTTGCAGAGTAGAATCCATTGACCAGAACGCTAGCAGAGATCTTGTATGCAACCTATGTTTACCTCTAGACACGGCTTTTTACATGCCCGAAGCTGTAAATATCCATCCTCGACGCTATCTCGAGGCATTGTACTTAGCATGCCAAAATTTGGTGATGGAGTTGCCAAAGTCTAGCATTAGATTGCATAAAGAATCTGTTCATAAACTCCTTGATTTAGAAGGCGAATACGATGCAGTGATAGTTTGTTTGGGTGCCAAAGCCGATATGCTGCCCGAACTCTCCGGAAGGCTTCCTTTAAGAATGTGTAGAGGTGTTGTTACTCACCTGCAGCTCCCTGATCATATCTGTGATGTCTTTCTGGAATCGGCACCATCGATATTATCAGATGCATGGCTTGCAGTACAGGGGCCTCGAAGTTTACATATGGGCTCGACGTGGGAATGGGGATCGAGAAATTCATCCCCAGATGTCTTGGAAGATGAAAGCTTCAAAACTCTCGAAGAACTCGTGCCGAAAGTGTCGGTTTTTTATCCCAATATAAAGAATTGGACTTTTGCCGGAGCGAGGGCCGGTCTCAGGGCAATGCCGCCACTAACTTCCCTTGGATCACCTCCACTTTTGGGGCGTATAAATGATATTATAGGATGGAGTGATTGCCAATACTGGTTATTCGGACGACTTGGTTCTAGGGGATTGCTTTACCATGGATGGCTTGGAAAATTAACAGCACAAGCTGTGGTTGCAGGCGATGAAGAACTGCTTCCTCCTGAATTCATTTCTTGGAAGAAAAAAAGTGAGTAA 3363 44.31 MSGWDEGAIYYSDQAQSLGDGSSGGRIGDPESADATNYSVLRKFKEFIRSFETNKNVFPYRESLLHNPKFLCVDMEDLNAFDADLPDKLRSSPSDYLPLFETAAAEVVMNLRTKVAGETGEMVEPVPGDVQILLISKEDPVSMRSLGAQYISKLVKISGITISASRTKAKATYVTLLCKNCRSMQRVPCRPGLGGAIVPRSCNHVPQAGEEPCPLDPWIVVPDRSTYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTIMGIYSIFQAANSSASHKGAVAVRQPYIRVVGMEEASEAKSRGPASYTPEEVEEFKKFAAEPDVYKSICSKIAPSIFGHDDVKKAVACLLFGGSKKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASANSTKGENRASKEENWLKRYIQYCRTECHPRLSESASVMLQNSYVKIRQDMRKQANETGETTPIPITVRQLEAIVRISEALAKMKLSHVATEEYVQEAIRIFTVSTMDAARSGINDVVNLTSDMANEIKQAETQIKRRIGIGNHISERRLIDELTRMGLNESIEQIQCPCTDILISRDRYAVLGAGFAGLSVAWHLLKHSSEGVDLHLDIYDEIGIGGGASGVSGGLLHPYSPKGKPLRWGVECWNECLKLLTIAEAAAQSNELDWDTKDDGQVVCSSIVRRRGILRPALSMKSLVSLRDNAQNCIPSCRVESIDQNASRDLVCNLCLPLDTAFYMPEAVNIHPRRYLEALYLACQNLVMELPKSSIRLHKESVHKLLDLEGEYDAVIVCLGAKADMLPELSGRLPLRMCRGVVTHLQLPDHICDVFLESAPSILSDAWLAVQGPRSLHMGSTWEWGSRNSSPDVLEDESFKTLEELVPKVSVFYPNIKNWTFAGARAGLRAMPPLTSLGSPPLLGRINDIIGWSDCQYWLFGRLGSRGLLYHGWLGKLTAQAVVAGDEELLPPEFISWKKKSE 1120
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 6577186 6586324 + BLOR00598 Blo01g00598 55038
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00598 1120 SMART mcm 139 653 IPR031327 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein family signature 435 449 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein family signature 375 390 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein family signature 487 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein family signature 514 522 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein family signature 463 476 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 Pfam FAD dependent oxidoreductase 726 1098 IPR006076 GO:0016491
Blo01g00598 1120 Gene3D - 315 669 IPR027417 -
Blo01g00598 1120 ProSitePatterns MCM family signature. 443 451 IPR018525 GO:0003677|GO:0005524|GO:0006260
Blo01g00598 1120 Gene3D - 143 278 IPR012340 -
Blo01g00598 1120 CDD MCM5 338 651 - -
Blo01g00598 1120 Gene3D - 36 121 - -
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 294 306 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 170 182 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 570 585 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 144 159 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Blo01g00598 1120 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 646 663 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Blo01g00598 1120 SUPERFAMILY Nucleotide-binding domain 725 1011 - -
Blo01g00598 1120 Pfam MCM N-terminal domain 42 113 IPR027925 -
Blo01g00598 1120 Gene3D - 170 228 - -
Blo01g00598 1120 Pfam MCM OB domain 143 278 IPR033762 -
Blo01g00598 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 653 IPR027417 -
Blo01g00598 1120 Pfam MCM P-loop domain 322 544 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 Pfam MCM AAA-lid domain 562 651 IPR041562 -
Blo01g00598 1120 SUPERFAMILY Nucleic acid-binding proteins 43 300 IPR012340 -
Blo01g00598 1120 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 64 677 IPR031327 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 ProSiteProfiles MCM family domain profile. 334 540 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo01g00598 1120 PANTHER DNA REPLICATION LICENSING FACTOR MCM5 64 677 - -
Blo01g00598 1120 Gene3D - 828 1050 - -
Blo01g00598 1120 Gene3D - 727 1099 IPR036188 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00598 Blo-Chr1:6577186 Blo03g01396 Blo-Chr3:40460436 3.39E-100 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00598 K02209 - csv:101211822 1250.73