Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00600 ATGACTATGGAGGATCAATTGGAGACAGTTTCCGGCGAGGCTAACCAGTTTCCTATCGGTCTGCGTGTCCTTGTGGTGGACGACGATCGTTGTTGCCTCAAATTTGTGGAGACTATTCTTCGAAAGTGCCAGTTTAATGTGACGGCCACCAGTCAACCAATGGAGGCATTGGAGATGTTAAGGGAAGATAAAAACAGGTTTGAAATTGTAATTACTGATGTAAATATGCCTGGAATGGATGGTTTTAAGCTCCTCGAGCTGATTGGGCTTGAAATGGACCTCCCCGTTATAATGTTGTCGGCTCATGGCGACACGAAATACGTGATGAAAGGGGTTCTGCATGGGGCCTGCGATTATCTGTTGAAGCCGTGTCGAATGTTGGAGTTGCAGAACATTTGGCGGCATGTTGTTAAGAGAAATATGAGCCAGAAGGAGAAGAACAAGAACAATCAAGATGATGAACAAGGATTGGCACAGCCTGAAAATCCCGAAAATTCCGATAATTTGAAAGCCGGTCAAAAGAGGAAGGACCAAAACGAAGGGGAGGAAGACGAGAATGGCGAAATCGAGACCGAAGATCCGGCTACGACTCGGAAGAAGCCGAGAGTGGTTTGGTCGCGTGAGCTGCACCAGAAGTTTGTAGCAGCTGTTGCTCATTTCACTATCGAAAAGGCCTTTCCGAAGAAGATTCTCGATTGGATGAACATCGAGGGGCTCACTCGAGAAAACGTGGCTAGCCATCTTCAGAAATATAGGATGTACCTGAGAAAAAAGGAGGCTATGGAAAAAGAACAGGAAAACCCGATGCACATAAGGTCGATTGAGGGGTTGCCGGGATCTCAAAGATTTTCGACCAAGCCATTATCGTCGAATCGATCGAGTGGAGTTCTTAGTACATTCAACTCTCCTTCTGGTTTGACCATGAATGGGGTCGTTTCTCCAGGATTAATCCAGCAAAATGCTTCTCAAAACATGAACAATTCTTTTGGTTTACTCCAAAAATTCCGGCCAGGCCAATCGCCCGTGTTATTGAATGGGAATCCGACATCATTGGAGGTTAATCCGATCAACAATCTCTCTGGCTTCTCATATCCACCGAGTTTTCCCAACGGTGGAGTTGCTTTAGCTAGCTCTATAAATTCCGGGCCGAAATTGCTTGCCAATCATTTGCTTTTGCAAGGAAATCAACATGTTCTAGGGGTAACTTCATTGAGACCGGAATCTTTCGATATTGGCACGAACGTCTCGTCGAATCTTTTGGGTCACGATCAAAGTAAAAGAGATTGGCAGCAAGGAGTTCCTTTGTCTAAATTTCCATCGACAGTCTTTGGACCCTTTCAAACTTACTATCATCATGAAATGCCTTCGAACAACTCGGGAATATCTTATGCTCACTCTCCAATTGGTCTACCCTCGATGAATGCAGTTCAAAATCCTCAGCCTAATTTTCGAGTAGACGTCCCCCGCCAAGAAGATCTGATCGGCAGTGTCATCCAAACTATGAATTGTACACAAAAGCCGGAGGGGGAAGAACACAAACCCATTTTCGGACACAATCCAAATCATTCTGCCATGAATTCTCTATGTTTGGCCGATGAAATTATGGGTCAAAACAACATGGCGAGTGTCGAAAATTCCGATATATCACAAATGATTGTCCAATCCAATGACAATATGGTATCATTTGGGCAGCACAACCCAGTCGATAAACCACTGGCCGAGCCGAGTATGAATTTCGATGCGAACAACTTCTTGAATTCGGCACAAGATGGATTCCTTCAAAGTGGCTTTGATTCATTTGATGAGATGGTCAATGGGGTTGCCAAACAGGACGACATTAATCGGCGGAGTTTTCTGGACGTGATGCTCACTCGAACGGGTCGTGTACAGAAAAGTGGCAATTTCTCTGGACTTCTAGTCTTGAGAAAGAATTGA 1935 44.81 MTMEDQLETVSGEANQFPIGLRVLVVDDDRCCLKFVETILRKCQFNVTATSQPMEALEMLREDKNRFEIVITDVNMPGMDGFKLLELIGLEMDLPVIMLSAHGDTKYVMKGVLHGACDYLLKPCRMLELQNIWRHVVKRNMSQKEKNKNNQDDEQGLAQPENPENSDNLKAGQKRKDQNEGEEDENGEIETEDPATTRKKPRVVWSRELHQKFVAAVAHFTIEKAFPKKILDWMNIEGLTRENVASHLQKYRMYLRKKEAMEKEQENPMHIRSIEGLPGSQRFSTKPLSSNRSSGVLSTFNSPSGLTMNGVVSPGLIQQNASQNMNNSFGLLQKFRPGQSPVLLNGNPTSLEVNPINNLSGFSYPPSFPNGGVALASSINSGPKLLANHLLLQGNQHVLGVTSLRPESFDIGTNVSSNLLGHDQSKRDWQQGVPLSKFPSTVFGPFQTYYHHEMPSNNSGISYAHSPIGLPSMNAVQNPQPNFRVDVPRQEDLIGSVIQTMNCTQKPEGEEHKPIFGHNPNHSAMNSLCLADEIMGQNNMASVENSDISQMIVQSNDNMVSFGQHNPVDKPLAEPSMNFDANNFLNSAQDGFLQSGFDSFDEMVNGVAKQDDINRRSFLDVMLTRTGRVQKSGNFSGLLVLRKN 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6592662 6595219 + BLOR00600 Blo01g00600 55040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00600 644 CDD REC_typeB_ARR-like 23 137 - -
Blo01g00600 644 MobiDBLite consensus disorder prediction 140 200 - -
Blo01g00600 644 MobiDBLite consensus disorder prediction 153 167 - -
Blo01g00600 644 PIRSF RR_ARR_type-B 1 625 IPR017053 GO:0003677|GO:0003700|GO:0009736
Blo01g00600 644 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 614 IPR045279 GO:0009736
Blo01g00600 644 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 200 253 IPR006447 GO:0003677
Blo01g00600 644 SUPERFAMILY Homeodomain-like 197 257 IPR009057 -
Blo01g00600 644 MobiDBLite consensus disorder prediction 168 182 - -
Blo01g00600 644 Gene3D - 21 157 - -
Blo01g00600 644 SMART REC_2 21 133 IPR001789 GO:0000160
Blo01g00600 644 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Blo01g00600 644 Gene3D - 196 258 - -
Blo01g00600 644 MobiDBLite consensus disorder prediction 278 296 - -
Blo01g00600 644 MobiDBLite consensus disorder prediction 275 296 - -
Blo01g00600 644 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Blo01g00600 644 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 614 - -
Blo01g00600 644 SUPERFAMILY CheY-like 20 154 IPR011006 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00600 Blo08g00530 CCT
Blo01g00600 Blo08g00530 ECH
Blo01g00600 Blo16g00870 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00600 Blo-Chr1:6592662 Blo08g00530 Blo-Chr8:15145143 1.76E-152 dispersed
Blo01g00600 Blo-Chr1:6592662 Blo16g00870 Blo-Chr16:36260074 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11865 PF00072 Response_reg 2.80E-24 CL0304 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00600 K14491 - qsu:112019876 467.233