Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00614 ATGGCTTCAAGGATGGCTTGTTTAACTACAGAGCATTTAGCAGGCATGAAAAGACAGAAAGCCAGCAAAGGTCCAAATCTCTTCCTCCGTTCACTCCACGAAGCTGAAACCGAGTTTCTGATTCGACCTACTATTCCAGCGTTCAGCTGCTTCTGTTACAGAGAAGCAAGCACCATGTCCTTCACGATAACCAATGGGATCCACACAGAGCAAGACTCTTTCATCGTCCCCTTACTGTCTTCTCAAAGATCGGCCACTAACTGTTCCTCTCAGGTCGCCATTGTTGGTGCTAAAGTCTGCCCCATTGAGAGCCTCGACTACGAGATTTTTGAGAATGAGATCTACAAGCAGGATTGGAGAAGCCGTAGGAAGTTGCAGATTTTTGAGTATACATTCATGAAGTGGATTTTGTGCTTCTTGATTGGTCTGATAGTTAGCGTTATTGGTTTCTGTAATAATCTTTCGGTTGAGAATATTGCTGGTGTGAAATTCGTTGTCACCTCCAATATGATGCTTGAGGATAGGTATTGGATGGCCTTTCTTGTTTTTTCTATTTCCAATTTGGTTCTCGCTCTATTTGCAGTAGTGATCACGGCATTGATCTCACCAACAGCAGCTGGTTCAGGCATACCAGAAGTAAAAGCCTATTTGAATGGTGTAGATGCACCCAGAATTTTTTCAATAAAAACATTAGTAGTTAAGGTTGTAGGCAGCATTTCTGTTGGATCATCGTCTTTGCTAGTAGGAAAGGCAGGGCCTATGGTGCATACTGGTGCTTGCATTGCTTCTCTCCTAGGTCAGGGGGGGTCAACGAAATATCATTTGACGTGGAGATTTCTTAGATATTTCAAGAACGACAGAGATAGGCGTGATCTTATAACATGTGGAGCAGCTGCTGGAATTGCGGCTGCTTTTCGTGCTCCTGTGGGTGGTTTGCTGTTTGCTTTTGAAGAGATGGTATCTTGGTGGCGAAGTGCTCTATTATGGCGAGCATTTTTCACGACTGCAGTAGTTGCGATTATATTGCGCTCTTTAATTGACGTGTGCTTAAGTGGAAAATGTGGACTATTTGGTAAGGGGGGTCTGATAATGTTTGATGTCTATTCAGAAACTGTTTCATATCACATACTGGATGTGCCTTCTGTGCTTGTCCTTGGAGTTGTAGGGGGTATACTAGGAAGCCTATTTAACTTCATTTTAGGTAAAGTCCTTCGACTTTACAGTTTCGTGAATGAGAAAGGCTTTGTATACAAGATTCTGCTTGCTTGCGCAGTCTCGATTTTCACATCCTGTCTTCTTTTCGGATTACCCTGGCTTGCAACTTGCCAAGCTTGCCCAACTAGCTCATCAGAAGAGTGTCCTACAATTGGACGATCCGGAAACTACAAGAAGTTTCAATGTCCAGCTCATCACTACAATGATCTTGCAAGTCTTATATTCAACACCAGCGATGATGCAATCAAAAATCTCTTCAGCAAAGATACCGACTCGGAGTTTCAAATCTCGTCAGTTATCATATTTTTCATTACTTGCTATTTCTTAAGCATCATCAGCTATGGAGTTGTTGCTCCTATTGGTTTATTCATTCCTGTTATTGTGACGGGTGCCTCCTATGGGCGTTTAATTGGAATGTTACTTGGCTCACACTCGAAGCTTAACCATGGCCTTTTTGCCGTACTGGGTGCTGCTTCGTTGCTCGGGGGTACGATGAGAATGACGGTTTCTCTCTCTGTCATCATCCTGGAACTGACCAACAATCTCTTATTGCTTCCTCTGATAATGGTGGTTTCTCTCATCTCCAAAACCGTAGCCGACGCTTTCAATAGTAATATTTATGATCAAATGTTGAAAGCCAAAGGGTTTCCTTATCTCGAATCCCATGCAGAGCCATACATGAGGCAGCTGATGGTCAGTGACGTGGTGATGGGGCCACTTCAAATATTTCAAGGGATCGAGAAAGTGAGTAACATAGTACATGTTCTTAGAATGACAAGACATCATGGTTTTCCTGTCGTTGATGATCCTCCTTTCTCCCAAACCCCTGTTCTGTTTGGCATCGTTCTTCGCGCCCATTTGATTACATTGTTAAAGAAGAAAGCTTTTATACCTACAACAGTGCCTGTCGATGTTAGTGCCTATACGCAATTGTCGGCTGGGGATTTTGCGAAAAGGGGTTCGAATAACACCGAGAATATCGAGAATGTGGAGTTGACAGAGGAAGAGATGGAGATGTTCATCGACCTACATCTGTTTAGTAATGCTTCACCTTATACCGTTGTTGAGACGATGTCGTTAGCAAAGGCGCTCGTCCTTTTCCGTCAAGTTGGATTGAGGCATATGCTTGTCATTCCCAAATTTTCTGGGAGATCGCCAGTTGTGGGCATATTAACGAGGCACGATTTCATGTCGGAACACATATTGAGCTTGTATCCTTCGCTCGTGAAAAGCAGGTGGAAGAGACTGCGAATCCAGACAGCCTTTCTCAGTCTCAACGAAACCAGCCATGAAAGCTCTCAAGCTCCGCCCCCACTCCCGCCGGTGCCGGCAAGCGCTGCAGCCGCTGCAAATATTACAGCAGAAACTGCCCATCATCATAAAGAATTGAATCGGTTGGAGAAAGTGGAAGATGGGTTGGCGAGAGCCAGAGCAGCCATTAATGGAGCAGCTTCATCGAGAAGAAACGTCTCTTCGGACTCCGACGAAGAGTTCATCCCCAGAGGAGATACTTACAGAAACCCACTTACCTTCCATCAGTTGAGCTTCTCCGATTCCTCTTTCCATGCAACGTTAACGCTTTAA 2799 44.3 MASRMACLTTEHLAGMKRQKASKGPNLFLRSLHEAETEFLIRPTIPAFSCFCYREASTMSFTITNGIHTEQDSFIVPLLSSQRSATNCSSQVAIVGAKVCPIESLDYEIFENEIYKQDWRSRRKLQIFEYTFMKWILCFLIGLIVSVIGFCNNLSVENIAGVKFVVTSNMMLEDRYWMAFLVFSISNLVLALFAVVITALISPTAAGSGIPEVKAYLNGVDAPRIFSIKTLVVKVVGSISVGSSSLLVGKAGPMVHTGACIASLLGQGGSTKYHLTWRFLRYFKNDRDRRDLITCGAAAGIAAAFRAPVGGLLFAFEEMVSWWRSALLWRAFFTTAVVAIILRSLIDVCLSGKCGLFGKGGLIMFDVYSETVSYHILDVPSVLVLGVVGGILGSLFNFILGKVLRLYSFVNEKGFVYKILLACAVSIFTSCLLFGLPWLATCQACPTSSSEECPTIGRSGNYKKFQCPAHHYNDLASLIFNTSDDAIKNLFSKDTDSEFQISSVIIFFITCYFLSIISYGVVAPIGLFIPVIVTGASYGRLIGMLLGSHSKLNHGLFAVLGAASLLGGTMRMTVSLSVIILELTNNLLLLPLIMVVSLISKTVADAFNSNIYDQMLKAKGFPYLESHAEPYMRQLMVSDVVMGPLQIFQGIEKVSNIVHVLRMTRHHGFPVVDDPPFSQTPVLFGIVLRAHLITLLKKKAFIPTTVPVDVSAYTQLSAGDFAKRGSNNTENIENVELTEEEMEMFIDLHLFSNASPYTVVETMSLAKALVLFRQVGLRHMLVIPKFSGRSPVVGILTRHDFMSEHILSLYPSLVKSRWKRLRIQTAFLSLNETSHESSQAPPPLPPVPASAAAAANITAETAHHHKELNRLEKVEDGLARARAAINGAASSRRNVSSDSDEEFIPRGDTYRNPLTFHQLSFSDSSFHATLTL 932
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6780429 6787411 + BLOR00614 Blo01g00614 55054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00614 932 MobiDBLite consensus disorder prediction 887 907 - -
Blo01g00614 932 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 70 828 - -
Blo01g00614 932 PANTHER CHLORIDE CHANNEL PROTEIN 70 828 - -
Blo01g00614 932 Gene3D - 626 804 IPR046342 -
Blo01g00614 932 Gene3D Clc chloride channel 126 625 - -
Blo01g00614 932 PRINTS Plant CLC chloride channel signature 319 327 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo01g00614 932 PRINTS Plant CLC chloride channel signature 108 116 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo01g00614 932 PRINTS Plant CLC chloride channel signature 351 358 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo01g00614 932 PRINTS Plant CLC chloride channel signature 333 343 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo01g00614 932 PRINTS Plant CLC chloride channel signature 475 491 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo01g00614 932 CDD CBS_pair_voltage-gated_CLC_euk_bac 627 804 - -
Blo01g00614 932 PRINTS Chloride channel signature 573 592 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 611 625 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 203 220 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 298 317 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 555 571 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 234 253 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 PRINTS Chloride channel signature 523 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 Pfam CBS domain 755 803 IPR000644 -
Blo01g00614 932 SUPERFAMILY Clc chloride channel 112 627 IPR014743 -
Blo01g00614 932 SMART cbs_1 644 697 IPR000644 -
Blo01g00614 932 SMART cbs_1 755 806 IPR000644 -
Blo01g00614 932 ProSiteProfiles CBS domain profile. 751 812 IPR000644 -
Blo01g00614 932 Pfam Voltage gated chloride channel 191 605 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo01g00614 932 SUPERFAMILY CBS-domain pair 627 803 IPR046342 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00614 Blo-Chr1:6780429 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo01g00614 Blo-Chr1:6780429 Blo02g01193 Blo-Chr2:43656855 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00614 K05016 - pop:18099916 1151.35