Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00622 ATGGAGAAGGTATGTGGATGTTGGGTTGTTCTCAAACGCGGTGCTAAAGGAAACTGCAAGTCCTCTGCCTCTAAAGATTCTGCTAACGTTATTCCTCGCAGCAGCCTAGTTTATGATACTGCGACAGAGACACGATACCTTAATGCAAGCAATCGAGTACTCTGCTCCTCGATCGAAGCTCACCTATCATCTGATAATCCCAACTCATTGCCACCAGAGAACAAACCTACAAGCCATTTGCTTCAATTTTCTTTTCAGGAGTTAAAATCTGCAACAGGAAATTTCAGACCAGATAGTATAGTTGGGGAGGGAGGATTTGGATATGTCTTCAAAGGATGGATCGAGGAGAATGGGACGGCACCTGCAAAACCCGGATCGGGAATTACTGTTGCCGTCAAGAGCTTGAAGCTAGATGGTCTTCAAGGCCACAGAGAGTGGATGGCTGAAGTTGACTTTCTTGGTCAGCTCCATCATCCTAATCTTGTGAAGCTTATTGGCTACTGCATCGAAGATGATCAACGATTGCTGGTGTATGAATTCATGACGCGCGGAAGTCTTGAAAATCATCTTTTCAGGTGGACTGTACCTCTTCCATGGTGCGTGAGGCTTAAGATGGCGCTTGGTGCAGCCAAAGGACTTGCCTTTCTCCATTATGCTCCAGAACCAGTCATTTATCGAGATTTTAAGACTTCCAATATTTTGCTTGATTCAGAATACAACGCCAAGCTTTCGGATTTTGGTTTGGCAAAAGCCGGTCCTCGCGAAGGCAAAACGCATGTTTCTACTCGAGTCGTTGGAACTTACGGCTACGCGGCACCCGAATATATCATGACTGGACATCTAACATCGAGGAGCGACGTCTATAGTTTCGGCGTAGTTCTTCTCGAGATTTTGACAGGCCGAAGATCGATGGACAAAAACAGACCAAGTGGTGAGCAGAATCTAGTGACATGGGCACGACCATATCTCACCAACATAAAACCAATCTACCACATTGTCGATCCTCGGTTAGAGCTTAACTACTCCATTAAAGGCGTTCAGAAGGTCTCTCAACTTGCTTTCAGCTGCCTCAGCCGAGACCCGAAATCTCGTCCGACAATGGATGAAGTCGTAAAGAATCTCTCGTCATTACAAGGTCTTAACGACCTGGCTGTTTGGTCATCCCATTCTCGGATATCTCAGCAAGGGCGGAGGAAGAAGAGGGCCGATTCTAATATGAAAAGCATCAGAGCTTCTCCACTGAATAACAGGAAGCATTAA 1260 45.95 MEKVCGCWVVLKRGAKGNCKSSASKDSANVIPRSSLVYDTATETRYLNASNRVLCSSIEAHLSSDNPNSLPPENKPTSHLLQFSFQELKSATGNFRPDSIVGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWMAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRWTVPLPWCVRLKMALGAAKGLAFLHYAPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPREGKTHVSTRVVGTYGYAAPEYIMTGHLTSRSDVYSFGVVLLEILTGRRSMDKNRPSGEQNLVTWARPYLTNIKPIYHIVDPRLELNYSIKGVQKVSQLAFSCLSRDPKSRPTMDEVVKNLSSLQGLNDLAVWSSHSRISQQGRRKKRADSNMKSIRASPLNNRKH 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6870745 6873385 - BLOR00622 Blo01g00622 55062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00622 419 Gene3D Phosphorylase Kinase; domain 1 72 180 - -
Blo01g00622 419 SUPERFAMILY Protein kinase-like (PK-like) 76 372 IPR011009 -
Blo01g00622 419 PANTHER OS01G0588500 PROTEIN-RELATED 56 401 - -
Blo01g00622 419 ProSiteProfiles Protein kinase domain profile. 95 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00622 419 Pfam Protein tyrosine and serine/threonine kinase 100 374 IPR001245 GO:0004672|GO:0006468
Blo01g00622 419 CDD STKc_IRAK 101 377 - -
Blo01g00622 419 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Blo01g00622 419 Gene3D Transferase(Phosphotransferase) domain 1 181 394 - -
Blo01g00622 419 MobiDBLite consensus disorder prediction 391 419 - -
Blo01g00622 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Blo01g00622 419 PANTHER OS01G0588500 PROTEIN 56 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00622 Blo-Chr1:6870745 Blo16g01134 Blo-Chr16:39850881 1.56E-173 dispersed
Blo01g00622 Blo-Chr1:6870745 Blo10g00487 Blo-Chr10:10366503 1.24E-173 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84089 PF07714 PK_Tyr_Ser-Thr 1.10E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00622 - - qsu:111988517 689.878