Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00627 ATGTTGATTCTGAAAGAAGGGACTAGGCCGCCATGGGTGGCATTGGGAGCTTCAGTTTGGGTCCAAATAGCAGCTGGAAATGCGTACAACTTTCCATTGTATTCTCACTCTTTGAAATCGGTTCTGGGTTTTAGTCAACTCCAGCTTACTTTGCTTGGAGTGGCAAATGATATTGGTGAGAACGTGGGTATTCTTCCTGGTTTAGTTTCCAACAAGCTTCCTCCATGGATGTTGCTTTTGATTGGTGCTCTGGCCTGCTTCTTCGGCTATGGTGTAATTTGGCTTTCGTTAAGCCGTACCGTTCAATCTTTACCTTTTTGGTTGTTATGGGTTGCACTTAGCGTTGCAACTAATAGTAATGCCTGGTTTACCACTGCTGTGCTTGTAACCAATATGAGAAACTTCCCTCTCAGTCGAGGAACGGTTGCTGCTATTCTCAAAGGCTATGGCGGGCTCAGTGGTGCAGTTTTTACTGAGATCTTTAGCATACTTCTTCAGAACTCCTCTACTAATCTTTTGTTGTTCCTTGCACTTGGAGTTCCGCTTCTCTGCATCAGCATGATGTACTTTGTGAGACCTTGTACTCCAGCTTCTGGCGAAGATCCATCTGAAAAAGGACGTTTTAATTTCGCTCTAGCTGCTAGTGTCGTTCTTGGAATTTTTCTTCTCACGACCACAATTTTAAATGATGTTTTTCACTTAAACACTCTTATTGCCTATGTTTTTGTTGGTGTGATGGTTCTGCTTCTCATGGCTCCCCTGGCGATCCCTGTAAAGATGACATGGTGTCGTATGCCAGTCAGCAAAGAGGGGAAAATTGTCCAATCAGCAGGGTCTTTGGAGACTCAGATTCACGAAAATAATGTAGGTGAGTTGGAAGAACAGCTATTGGTGCCTTCATCCTCGAGAGTAAACTTGGAAGGCTCTGCTGAAAGTGAAGATGTATCAGAGGTGGCAATGCTCCTAGCTGAAGGAGAGGGGGCAGTGAAGAAGAAGAGAAGGCCTAAGAGAGGGGAGGATTTTACGTTTACTGAAGCGATAATCAAGGCTGATTTTTGGCTTCTATTCTTAGTTTACTTTGTCAGTGTAGGCACCGGAGTCACTGCACTTAATAACCTGGCTCAAATTGGGATTGCTCAAGGTGTAAATGATACTACAAGCTTGTTGTCTCTTTTCAGCTTCTGCAATTTTGTGGGCCGTCTTAGTGGTGGTGTTGTCTCGGAACATTTTGTCAGGACAAGAACAGTTCCTCGCACTATTTGGATGACACTGACACTGCTAGTAATGATCGTTACCTATCTTTTGTTTGCTTCTGCTATTGATGGTACTCTCTATCCGGCTACTGCTTTACTTGGGATCTGCTATGGTACTCAAATCTCAGTAATGGTTGCAACTGTCTCAGAAATTTTTGGGTTAAAACATTTTGGAGTACTCTACAATGTTATGTCATTAGGGAATCCTCTTGGTGCTTGTCTTTTCTCTGTCCTCCTAGCTGGGTACATTTATGATAATGAAGCATCAAAGCAGCATAAACTCGACCCAACGGGCTCTAACTTATCTTGCTTAGGCGCTAATTGTTTTAGAGTCACCTTCGAGGTTCTGGCTGGCGTCTGTGCTGTCGGTTGCATCTTGAGCATTATTTTGACTAGACGAATAAGGCCAGTCTACCAAATGCTATACTCTGGTGGTTCTTTTCGGCTGCCTCAGAGTTGA 1713 43.72 MLILKEGTRPPWVALGASVWVQIAAGNAYNFPLYSHSLKSVLGFSQLQLTLLGVANDIGENVGILPGLVSNKLPPWMLLLIGALACFFGYGVIWLSLSRTVQSLPFWLLWVALSVATNSNAWFTTAVLVTNMRNFPLSRGTVAAILKGYGGLSGAVFTEIFSILLQNSSTNLLLFLALGVPLLCISMMYFVRPCTPASGEDPSEKGRFNFALAASVVLGIFLLTTTILNDVFHLNTLIAYVFVGVMVLLLMAPLAIPVKMTWCRMPVSKEGKIVQSAGSLETQIHENNVGELEEQLLVPSSSRVNLEGSAESEDVSEVAMLLAEGEGAVKKKRRPKRGEDFTFTEAIIKADFWLLFLVYFVSVGTGVTALNNLAQIGIAQGVNDTTSLLSLFSFCNFVGRLSGGVVSEHFVRTRTVPRTIWMTLTLLVMIVTYLLFASAIDGTLYPATALLGICYGTQISVMVATVSEIFGLKHFGVLYNVMSLGNPLGACLFSVLLAGYIYDNEASKQHKLDPTGSNLSCLGANCFRVTFEVLAGVCAVGCILSIILTRRIRPVYQMLYSGGSFRLPQS 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7060584 7063535 + BLOR00627 Blo01g00627 55067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00627 570 SUPERFAMILY MFS general substrate transporter 12 196 IPR036259 -
Blo01g00627 570 Pfam Major Facilitator Superfamily 356 551 IPR011701 GO:0022857|GO:0055085
Blo01g00627 570 Gene3D MFS general substrate transporter like domains 349 554 IPR036259 -
Blo01g00627 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 570 - -
Blo01g00627 570 CDD MFS_Mch1p_like 10 542 - -
Blo01g00627 570 Pfam Nodulin-like 11 258 IPR010658 -
Blo01g00627 570 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 570 - -
Blo01g00627 570 SUPERFAMILY MFS general substrate transporter 208 554 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00627 Blo-Chr1:7060584 Blo10g00521 Blo-Chr10:12315506 0 dispersed
Blo01g00627 Blo-Chr1:7060584 Blo15g00373 Blo-Chr15:5226356 2.42E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00627 - - pvy:116105435 839.336