Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00628 ATGAATCAAGAACTCCTAAGCAATCACCCCCAGATCCAAACCTACAACTTTCTTCATCATCAGACATCTCACTTCGATCCTTCTTCTTCTCACGACGACTTTCTCGAGCAAATGTTCTCAACTATCCCCTCATCTACTTGGCCTGACCTCAATCCGTCTATCAATTCCGCCATTACTGGAGGCTCCAGCAAGCTCAGAGACCTCTCCGACGAAACTCCCCTACCGAATCCTGAAAATCGTGGCTACTCGTATGACGAGTCGGCAAACTTGGCCTCGAAGCTCCCAAGCCACCAGATCAGCGGGAGCTCTCATGCTGCAAAAGCGGCAGCGATGATGCTTCAGCAGCACTTCTTGATGTCCAGAGTTTCCGGCGCTGGAGATGGTAACTCCTCTGAACTTCTCCCGATGCCTTTATCTATGGAGCCACCACAAGACGACGTCGCTGATGGCTTGTCTACATTTAAATCTCATAATCCAGGAGCTGATCAAGCTCTCTACAATGGATTCGCCACTCAGACGTTAAATCATCCACAACATTTCCAACCTCCTCAGTCACAAAACCATGGAGCTTCAGGTTCGGCGATTAACCAAGTTCCAGCTGGTGGCTCAACCGGGGCTACTGCGGCTCAGCCTAGACAGCGAGTGAGGGCTCGGAGAGGTCAAGCTACTGACCCTCACAGCATCGCTGAAAGATTGAGGAGGGAGAGAATCGCAGAGAGAATGAAAGCTCTGCAAGAACTGGTTCCTAACGCCAACAAGACTGACAAGGCTTCCATGCTGGATGAGATCATCGAATACGTCAAGTTCCTACAGCTCCAAGTCAAGGTTCTGAGTATGAGCAGATTAGGGGGCGCAGCTGCTGTTGCTCCCATTCTTGCCCATAAGTCTTCTGAGGGAGGAGGTGACTGCGTCCAAGCCAGTGGAAACGGTGGGGCATCCTCAAACGAAAGCCTGAATGTGACGGAGCACCAGGTAGCTAAAATGATGGAGGAGGATATGGGGTCCGCCATGCAGTATTTGCAAGGGAAAGGGCTATGCTTGATGCCCATTTCTCTTGCCACTGCGATTTCAACTGCCACGTGCCATTCGAGGAGCCCCCTGATTAGTGGAAGTACGGCCATCCCCTCCAACGTGGAAGGACCGTCCTCCCCCAACATGTCTGCTCTGACCGTCCAGTCAGCGACCTTAGTTAACGGCGTCAGTGACCTCACCGTCAAAGACGCCGCTTCCATTTCAAAGCCATGA 1245 51.81 MNQELLSNHPQIQTYNFLHHQTSHFDPSSSHDDFLEQMFSTIPSSTWPDLNPSINSAITGGSSKLRDLSDETPLPNPENRGYSYDESANLASKLPSHQISGSSHAAKAAAMMLQQHFLMSRVSGAGDGNSSELLPMPLSMEPPQDDVADGLSTFKSHNPGADQALYNGFATQTLNHPQHFQPPQSQNHGASGSAINQVPAGGSTGATAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGGAAAVAPILAHKSSEGGGDCVQASGNGGASSNESLNVTEHQVAKMMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRSPLISGSTAIPSNVEGPSSPNMSALTVQSATLVNGVSDLTVKDAASISKP 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7078735 7081472 + BLOR00628 Blo01g00628 55068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00628 414 SMART finulus 227 276 IPR011598 GO:0046983
Blo01g00628 414 MobiDBLite consensus disorder prediction 50 66 - -
Blo01g00628 414 MobiDBLite consensus disorder prediction 156 210 - -
Blo01g00628 414 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 371 - -
Blo01g00628 414 Pfam Helix-loop-helix DNA-binding domain 226 271 IPR011598 GO:0046983
Blo01g00628 414 MobiDBLite consensus disorder prediction 128 228 - -
Blo01g00628 414 MobiDBLite consensus disorder prediction 50 84 - -
Blo01g00628 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 221 270 IPR011598 GO:0046983
Blo01g00628 414 Gene3D - 218 285 IPR036638 GO:0046983
Blo01g00628 414 PANTHER TRANSCRIPTION FACTOR BHLH69 24 371 - -
Blo01g00628 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 219 280 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00628 Blo-Chr1:7078735 Blo10g00307 Blo-Chr10:4652003 1.25E-51 dispersed
Blo17g00860 Blo-Chr17:28076507 Blo01g00628 Blo-Chr1:7078735 4.44E-20 dispersed
Blo17g00875 Blo-Chr17:28856763 Blo01g00628 Blo-Chr1:7078735 2.41E-20 dispersed
Blo18g00720 Blo-Chr18:17979927 Blo01g00628 Blo-Chr1:7078735 1.59E-20 dispersed
Blo10g00030 Blo-Chr10:263062 Blo01g00628 Blo-Chr1:7078735 9.36E-22 transposed
Blo01g00628 Blo-Chr1:7078735 Blo16g00907 Blo-Chr16:36940811 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11868 PF00010 HLH 1.20E-09 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00628 - - qsu:111987215 472.626