Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00629 ATGGCTCAGTTCGAGAACTGCGGAGCGAAAAATTCGAAGTTAGATGGAAAGGGGGAGGGTGAGGAGGAATTAGAGGTGGTGATCAAAAGCGAAGGAAATGACGATGAAGATGATGTTATTGGCGATGGAAAATTTACAGAATGGCCGCGCCGTGAGCCGCAATTGAACAAGATCCAGTGCTGTGGGACTTACGGTGAGCAGGAACCGAGAAAGGCTCCACTCGAAACCCTAGAGGAGCGTTCTTTGGTTCAATCCCCAAAAAACAAGCAGATGAAAGGCTTATTGGTGATCTCTGCTGCAATTGATGGAGATGAATCCATGGAGGAAATAAGGGGTCCCCATAAAGAACTTACGTCTAGTGGAACAGCCAAGGAAGTTCAGCCTAAGATCGAAACTCAATTTCAATTCTCCGAACGCTCTACACATCCATCAGAACTTTCCCCATCATCACGCTCCATTTCTTCTGCCACCAATTTGACTTTGAAGAATAAAAAAGTGTTTCAGCCTAAGAACAACGGTGATTACAAACCTGGACTAAAACTGCAAAATGCACCTGACCTTAGAATTGGGCCTGCTTTTGCTACCGTGAAGATACCTGCTTCTGATGGCTACAACTGGAGAAAATATGGCCAGAAAGAAGTCAAGAGTCCTAAAGGTTTTCGAAGCTATTATCGGTGTTCAAACACCGAGTGCTGTGCTAAGAAGATTGAATGCAGTGATCACTTCGGTTGCATGACAGAAATTGTTTATAAAAGTGAACATTGCCATGATCCTCCTATGAAAATTAACAACACAAGGCAAAGTAAACGGCCATCATCAAGTGAAGCTACCCCTTGCAACGTTGGTGCAGTTCATTCCAGCTCTAGGCTTGAAGCTATCAATCTAACCACATCTTCAAAAGAACCTAGGGAAGAAACTCCCTCAACTTCTGAAGGAAAACAACAAATGACACGCAATGATGGTGAAATTGTTGAAACTTCAATAAAAAAAGAGCATGACAATGGATCCGAACCCAAACAACGGCAAGAACGTGAGATGGAGTATTCAGATTCTCTTAAACCTGGAAAAAAACCTAAATTTCTTGTTCAAGCTGTTTGCGAAGTGGGGACCTTCAGTGATGGATACCGGTGGCGTAAGTATGGGCAAAAAATGGTGAAGGGAAGTCCTCATCCTAGAAACTACTACAGATGCACCTCCACCGGCTGCCCCGTTCGTAAGCACACAATAACAGCTATAGATAATCCGCGCACGGTCACTACGGCTTACAAGGGGACACATGATCATGAGATGCCAGTGCCGAAGAAACGAAGTAGCATACCTCCTATGGCATCCATTGCTCCTATGAAAGATTCAAAATTGAAGAATGCCGAGATGGTCCCAAGTCAAATGTCTCAAATTCAAGTGGAAAAGGAGAAAGAGATGATAGACGAGACCTTAGATCTCAGAGGTGAGAAGGCGATGGAATCGGCCCAAACTCTTCTCAGTATTGGATTTGAAATAAAGCAATGCTAG 1512 43.92 MAQFENCGAKNSKLDGKGEGEEELEVVIKSEGNDDEDDVIGDGKFTEWPRREPQLNKIQCCGTYGEQEPRKAPLETLEERSLVQSPKNKQMKGLLVISAAIDGDESMEEIRGPHKELTSSGTAKEVQPKIETQFQFSERSTHPSELSPSSRSISSATNLTLKNKKVFQPKNNGDYKPGLKLQNAPDLRIGPAFATVKIPASDGYNWRKYGQKEVKSPKGFRSYYRCSNTECCAKKIECSDHFGCMTEIVYKSEHCHDPPMKINNTRQSKRPSSSEATPCNVGAVHSSSRLEAINLTTSSKEPREETPSTSEGKQQMTRNDGEIVETSIKKEHDNGSEPKQRQEREMEYSDSLKPGKKPKFLVQAVCEVGTFSDGYRWRKYGQKMVKGSPHPRNYYRCTSTGCPVRKHTITAIDNPRTVTTAYKGTHDHEMPVPKKRSSIPPMASIAPMKDSKLKNAEMVPSQMSQIQVEKEKEMIDETLDLRGEKAMESAQTLLSIGFEIKQC 503
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 7089512 7092364 + BLOR00629 Blo01g00629 55069
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00629 503 MobiDBLite consensus disorder prediction 1 52 - -
Blo01g00629 503 SMART WRKY_cls 371 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 MobiDBLite consensus disorder prediction 160 179 - -
Blo01g00629 503 ProSiteProfiles WRKY domain profile. 366 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 SUPERFAMILY WRKY DNA-binding domain 364 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 MobiDBLite consensus disorder prediction 12 27 - -
Blo01g00629 503 Gene3D WRKY domain 356 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 Gene3D WRKY domain 193 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 74 501 - -
Blo01g00629 503 MobiDBLite consensus disorder prediction 133 153 - -
Blo01g00629 503 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 Pfam WRKY DNA -binding domain 202 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 501 IPR044810 GO:0003700
Blo01g00629 503 MobiDBLite consensus disorder prediction 323 354 - -
Blo01g00629 503 SUPERFAMILY WRKY DNA-binding domain 199 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 MobiDBLite consensus disorder prediction 261 322 - -
Blo01g00629 503 ProSiteProfiles WRKY domain profile. 201 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00629 503 MobiDBLite consensus disorder prediction 255 354 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo01g00629 Blo14g00596 CCT
Blo01g00629 Blo08g00516 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00629 Blo-Chr1:7089512 Blo14g00596 Blo-Chr14:10283649 2.58E-93 dispersed
Blo01g00629 Blo-Chr1:7089512 Blo08g00516 Blo-Chr8:14563564 7.28E-103 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11869 PF03106 WRKY 5.60E-22 CL0274 Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00629 - - qlo:115977254 386.726