Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00680 ATGTGGATCACTCGAGCTACGGCATTCAAGTCATTGGACTTTGACTTCTTGTACGCTACAATCTCGGGATCATGGTGCCACAATCTAAGCACTGACAGACCTTTTCCTCGTCTGATAAAAGCTTTGCCCAACCGTCTTCTTCTTCTCCGTTTTGGTGGATTTCTGAGGGGAATTGCTGAAGCTGAGGAGGCGGAAGAAATGGCGAACGAAAAAGCCATTAGCCTCGAGGAGATCAAGAACGAGACTGTTGATCTGGAGAAAATTCCTATTGAGGAAGTGTTTCAGCAATTGAAATGCAGCCGAGAAGGATTATCATTTCAGGAGGGGGAAAGCCGGCTTCAAATCTTCGGTCCCAACAAACTAGAGGAGAAAAAGGAAAGCAAGATTCTGAAATTTTTAGGATTCATGTGGAATCCTCTTTCATGGGTGATGGAGGCTGCTGCTATAATGGCCATTGCATTAGCTAATGGTGGGGGAAAGCCTCCAGATTGGCAGGATTTTCTTGGAATTATTTGTTTGCTGGTTATCAACTCCACCATCAGTTTCATTGAAGAAAATAATGCTGGCAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCACCTAAAACTAAGGTTCTTAGGGATGGAAAATGGAGCGAACAAGATGCTGCAATTTTAGTACCAGGAGATGTCATTAGCGTTAAATTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTTGAGGGCGATCCATTAAAAATTGACCAATCTGCCCTTACTGGAGAATCACTTCCGGTTACCAAAAATCCCGGGGATGAAGTTTTCTCTGGTTCAACGTGCAAGCAAGGAGAGATTGAAGCTGTCGTTATTGCCACTGGTGTTCATACGTTCTTTGGCAAGGCTGCTCATCTCGTTGATAGCACCAACCAAGTTGGTCACTTTCAGAAGGTTCTCACTGCAATCGGGAACTTCTGTATATGTTCTATCGCAGTTGGAATGTTGATAGAACTTATTGTCATGTACCCGATTCAGCACCGACAGTATCGTGATGGAATTGACAATCTTCTCGTTCTTTTGATCGGAGGAATTCCTATTGCCATGCCAACTGTTTTATCTGTCACGATGGCAATTGGGTCGCACAAGCTATCTCAGCAGGGTGCAATCACCAAGCGGATGACTGCAATAGAAGAAATGGCTGGCATGGATGTTCTTTGCAGCGACAAAACTGGGACGCTCACTCTTAACAAGCTTAGTGTCGATAAGAATTTAATTGAGGTATTTACCAAAGGTGTTGATAAAGAGCATGTCATTTTATTAGCGGCGAGGGCATCAAGGACAGAAAACCAAGATGCCATTGATGCCGTTTTTGTTGGAATGCTTGCTGATCCAAAGGAGGCACGTGCGGGCATAACAGAAGTGCATTTCTTGCCGTTCAATCCTGTCGATAAAAGAACTGCATTGACATATATTGATTCAAAGGGAAATTGGCATCGAGCCAGCAAGGGTGCTCCCGAACAAATTATAGCTCTTTGCAATTGCAAAGAAGACGTGAAGAAGAAAGTTCATAATATAATTGACAAATTTGCTGAACGTGGCCTCCGATCGTTAGCCGTAGCAAGACAGGTAGTGCCCGAGAAAAGTAAGGAAAGTCCAGGTGCTCCATGGGAATTTATTGGTTTATTGCCTCTCTTTGATCCACCAAGACATGACAGTGCAGAGACCATACGAAGAGCTCTCCATCTTGGCGTGAACGTCAAGATGATTACGGGTGATCAACTTGCCATAGCAAAGGAAACTGGCCGCCGTCTGGGAATGGGAACAAACATGTATCCCAGTGCTTCCTTACTTGGCCAACACAAGGACGAAAGCATTGCCGGCCTTCCGGTAGAAGAACTTATAGAAAAAGCAGATGGATTTGCTGGAGTCTTCCCAGAGCACAAATATGAAATTGTTAAGAAGTTGCAAGAGCGGAAACACATATGTGGAATGACGGGAGATGGTGTGAATGATGCTCCTGCTCTAAAGAAAGCAGATATTGGAATTGCTGTTGCCGATGCTACTGATGCAGCACGAAGTGCATCAGATATTGTTCTTACTGAACCTGGTTTGAGTGTCATCATTAGTGCAGTCCTCACAAGCCGAGCTATTTTTCAAAGAATGAAGAACTATACGATATATGCTGTCTCCATTACAATCCGTATTGTTTTTGGTTTCATGTTGATTGCCCTCATATGGAAATTTGATTTCTCTCCATTCATGGTTTTAATAATTGCAATTCTAAACGATGGTACAATAATGACGATATCGAAGGATAGAGTAAAGCCATCTCCATTGCCGGATAGCTGGAAGTTAAAAGAAATATTTGCTACCGGGGTTGTGCTTGGAGGTTACTTAGCATTGATGACTGTCATATTTTTCTGGTTAATGAAAGACACCGATTTCTTCACGGTTTGTCCTTTTGCCTCTATAGTTGTTTTGGGCGATGGACAAGCCAGTTTTATAGAAGATAAATTTGGTGTAAAATCAATTAGGAATAGCCCTGAAGAGATGATGGCTGCTTTATACCTCCAAGTCAGTATAGTTAGCCAGGCCCTCATTTTTGTGACTCGCTCTCGAAGCTGGTCATTTATCGAACGCCCCGGCCTCCTTTTATTGACGGCATTTTTAATCGCACAACTGGTTGCAACTGTCATAGCTGTATATGCTCACTGGAATTTTGCAAAAATAAAAGGAGTTGGATGGGGGTGGGCTGGTGTCATCTGGCTTTACAGTATCGTCTTCTACTTTCCGCTTGACTTGATGAAGTTTGCTATTCGATATATCTTAAGTGGGAAGGCATGGCTTAACTTGCTTGAAAACAAGACTGCCTTTACCACCAAGAAAGACTATGGAAAAGAGGAAAGAGAAGCTCAATGGGCTCTTGCTCAAAGAACCCTCCATGGCCTTCAACCAGCACAAACAACTGATCTTTTCCCCGAAAAGAGTGGCTATCGAGAACTCTCTGAGATCGCCGAGCAAGCTAAGAGAAGAGCTGAGATTGCAAGGCTTCGAGAGCTTCACACGCTCAAGGGTCACGTAGAGTCAGTGGTGAAGCTCAAAGGGCTAGACATCGATACGATCCAACAGCATTACACCGTATGA 3120 43.81 MWITRATAFKSLDFDFLYATISGSWCHNLSTDRPFPRLIKALPNRLLLLRFGGFLRGIAEAEEAEEMANEKAISLEEIKNETVDLEKIPIEEVFQQLKCSREGLSFQEGESRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIELIVMYPIQHRQYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFTKGVDKEHVILLAARASRTENQDAIDAVFVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSKGNWHRASKGAPEQIIALCNCKEDVKKKVHNIIDKFAERGLRSLAVARQVVPEKSKESPGAPWEFIGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMKDTDFFTVCPFASIVVLGDGQASFIEDKFGVKSIRNSPEEMMAALYLQVSIVSQALIFVTRSRSWSFIERPGLLLLTAFLIAQLVATVIAVYAHWNFAKIKGVGWGWAGVIWLYSIVFYFPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPAQTTDLFPEKSGYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7889416 7903681 + BLOR00680 Blo01g00680 55120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00680 1039 Coils Coil 990 1010 - -
Blo01g00680 1039 Pfam Cation transporter/ATPase, N-terminus 87 150 IPR004014 -
Blo01g00680 1039 Gene3D - 163 903 - -
Blo01g00680 1039 SUPERFAMILY HAD-like 394 704 IPR036412 -
Blo01g00680 1039 PANTHER PLASMA MEMBRANE ATPASE 67 1019 - -
Blo01g00680 1039 Gene3D - 410 557 IPR023299 GO:0000166
Blo01g00680 1039 SFLD p-type atpase 380 708 IPR044492 -
Blo01g00680 1039 Gene3D - 201 285 - -
Blo01g00680 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 632 745 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 170 417 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 SFLD C1.7: P-type atpase like 380 708 - -
Blo01g00680 1039 SMART Cation_ATPase_N_a_2 84 156 IPR004014 -
Blo01g00680 1039 Coils Coil 58 81 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 680 692 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 574 584 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 552 563 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 657 676 - -
Blo01g00680 1039 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Blo01g00680 1039 Gene3D - 988 1039 - -
Blo01g00680 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Blo01g00680 1039 SUPERFAMILY Calcium ATPase, transduction domain A 201 298 IPR008250 -
Blo01g00680 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 84 935 IPR023298 -
Blo01g00680 1039 CDD P-type_ATPase_H 103 929 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo01g00680 1039 Pfam E1-E2 ATPase 200 377 - -
Blo01g00680 1039 PANTHER CALCIUM-TRANSPORTING ATPASE 67 1019 - -
Blo01g00680 1039 Gene3D - 395 694 IPR023214 -
Blo01g00680 1039 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 103 894 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo01g00680 1039 PRINTS H+-transporting ATPase (proton pump) signature 629 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 PRINTS H+-transporting ATPase (proton pump) signature 657 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 PRINTS H+-transporting ATPase (proton pump) signature 688 713 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 PRINTS H+-transporting ATPase (proton pump) signature 848 869 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 PRINTS H+-transporting ATPase (proton pump) signature 514 532 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g00680 1039 Pfam haloacid dehalogenase-like hydrolase 394 671 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00680 Blo-Chr1:7889416 Blo12g01100 Blo-Chr12:28687658 0 dispersed
Blo14g00667 Blo-Chr14:14446925 Blo01g00680 Blo-Chr1:7889416 0 transposed
Blo01g00680 Blo-Chr1:7889416 Blo16g00851 Blo-Chr16:35845816 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00680 K01535 - mnt:21399781 1692.17