Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00693 ATGGAGGATCACGCGGCGGTGCAAGAAGCAGCGGCCTCAGGATTGAAGAGCATGGAAGAGCTAATCTGCATCTTATCGCATCAAATCAACCAAAGCCACCTCGATCTCGGGAACCTCAATTGCTCTGAAATCACCGATTTCACCGTTTCTAAATTCAAGCAAGTCATTTCCATCCTTAACCGAACCGGCCACGCTCGCTTCCGCCGCGGACCGACGCTTCAACACCATCCCCCTCCCGGCAGGGTTCATCCCACTGCTCAACCGGAGAAAGAGCTTCAGACCGATTTTTCCTCTGTTTCGCCTCCGATCTACTCAACGACGTCGTCATTCGCCGGAGACGGCAGCATTTCTGACGGGAAACGAGGACCTTGTGTGGCTTTACCTCCGGCTCCGGCGCAATCCGCCGGAAAGCCGCCGCTGTCGTTGGGCAGTCGGAAGCGGTGCCAGGATCACGTCGTCTCCTGTGACGCTCCCGGGAACATTTCGTCCTCCTGCCGGTGTCATTGCGCTAAAAGAAGGAAATCGAAGGTTAAAAGGACCGTCAGGGTTCCGGCGATCAGCTCTAGAATCGCCGATATACCACCAGATGAGTATTCGTGGAGAAAATACGGGCAAAAGCCGATAAAAGGGTCGCCACATCCACGAGGGTATTACAAGTGTAGTAGCGTGAGAGGCTGTCCAGCTAAGAAACACGTAGAGCGCGCCACAGACGATCCGACCATGCTCATAGTAACTTACGAAGCCGAGCACCGTCACCCGCAGGCTCAACTGGCGGAGCCGGCGGATTAG 789 55.39 MEDHAAVQEAAASGLKSMEELICILSHQINQSHLDLGNLNCSEITDFTVSKFKQVISILNRTGHARFRRGPTLQHHPPPGRVHPTAQPEKELQTDFSSVSPPIYSTTSSFAGDGSISDGKRGPCVALPPAPAQSAGKPPLSLGSRKRCQDHVVSCDAPGNISSSCRCHCAKRRKSKVKRTVRVPAISSRIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPAKKHVERATDDPTMLIVTYEAEHRHPQAQLAEPAD 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8317187 8318170 + BLOR00693 Blo01g00693 55133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00693 262 MobiDBLite consensus disorder prediction 66 98 - -
Blo01g00693 262 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 95 254 IPR044810 GO:0003700
Blo01g00693 262 Gene3D WRKY domain 182 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00693 262 SMART WRKY_cls 194 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00693 262 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 96 - -
Blo01g00693 262 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 96 IPR044810 GO:0003700
Blo01g00693 262 Pfam WRKY DNA -binding domain 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00693 262 ProSiteProfiles WRKY domain profile. 189 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00693 262 SUPERFAMILY WRKY DNA-binding domain 192 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00693 262 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 95 254 - -
Blo01g00693 262 Pfam Plant zinc cluster domain 145 192 IPR018872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00693 Blo-Chr1:8317187 Blo01g01339 Blo-Chr1:51012480 6.64E-91 dispersed
Blo01g00693 Blo-Chr1:8317187 Blo16g00826 Blo-Chr16:34631010 1.49E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11870 PF03106 WRKY 1.20E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00693 - - rcn:112200990 312.768