Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00772 ATGGCAACTGTACAGAGAGTAGCGCAGTCCAGTGTGAGCGCGAGTCCAATCAATTATGGCTTAAGTAAAGCAAGTGGTGGGAGTGGCGGCAACGCAGTTGTTTCGGATCAGTTTCCGGAGGGATTAAGGGTTCTTGTTGTAGATGATGACGCTACCTGCTTGAGGATCCTTGAGCAGATGCTGCGCCGGTGTTTATATCATGTGACCACATGTTCCCAAGCATCTGTTGCTCTGAACCTTCTGCGTGAGAAGAAAGGCTGTTTTGATGTGGTATTGAGTGATGTTCATATGCCTGATATGGATGGATACAAGCTCCTTGAGTATGTTGGACTAGAAATGGACCTTCCTGTCATAATGATGTCTGCTGATAAGAGAACGAGTGCTGTCATGAAAGGAATCAGACATGGGGCTTGTGATTATTTAATTAAGCCCATCAGCTATGAGGAACTGAAGAATATCTGGCAGCATGTTGTTAGAAAAAAGTGGAATGAATATAAGGAACTTGAAAATTCGGGAAGTTTGGAAGATAATGATAAGCAAAAACGAGGGACTGGTGATGCAGAATATGCATGTTCTGCTCATGAAGGCGAAGAAGGAATTTCACAAACTACTAAAAGAAGGAGCAGTACCAAAGAAGAAGACAGCGAACTGGAAAATGATGATCCCTCAGTCTCAAAGAAGCCACGGGTAGTGTGGTCTGTAGAGCTGCACCAACAATTTGTCAGTGCCGTGAACCAACTCGGACTTGATAAGGCTGTGCCAAAAAGAATTCTTGAACTGATGAATGTACCTGGTTTAACAAGAGAAAATGTTGCAAGTCATCTGCAGAAATTTAGATTATATTTAAAGAGGTTAAGTGGAGTAGCTCAACAACAAACTTTTCCAAATATTTATTTTGGCCCTTTCGAACAAAATGTTAAATTGGACTCATTTGGAGTTGAAGCATTGGCAGTCGCTGGTCAAATTCCTCCACAAACTCTAGCAGCCATGCATGCTGAGCTATTTGGCCAACAAATGGGTAACCTATTACCACCAATGGACCAGACAGCTGTTTTACAAGCATCATCACAGGGACCCAAGTGTATGACAATTGAGCACGATGCAGTCAATCCATTCAGTCAGACTTTGGTCAAACACCAAACTAGTGATTCCAAAACTTACTCACCTTCCATTATATCTGTTGACGATGTTACTTCAGGATATAGTGGTGCATGGCCATCAAAAACCCTGAGTGTTATAGGGCCAAACAATCATGTTAGGATGAGTTCTCAGGATAGTAACATGTTGGTTGGTATAATGCAGGAGCAACAACAGCATAAACAATATCAGGAATGGCAGCAGCAGCAAAAGCAACATCCACACCAGCATCAACAGCAGCTAATATTGTCAGAACTCAGCAGCTCAATCAATGTGCAGCCATCTTGCCTCGTTCTGCCCTCACAGCCATCAGTCAATTTGCTCCCTGAAAACAGTCCTGATTCTGCCAAACAGAATCACAGTATTAATAGGGGTATCATTATTGATTACAGCCTTGCCCCACCTCAACACAATTGTTTGATGTCAAATTTTAACCAGATATCAGATGGGGATCTAAAACCTCTTAATACATTTAGTGCCACTGGGTACTCAGCTCAAGTGTTGGGTTCTCCTAAATCATCTTATTCTGTAACTGACACCAATAACTATGTTGGTCTAGTACGTACCTCCAGAGTGACATTTACTGCTGGCAGTCAATTGTCAGGTGTTGTCCGGAAGAGTGATAAACAGGGTTCTTATGGTTCAAAATCAGAAGAAATACTTGATCATGGCCATCTTAGGAACCTTGGATTTGTTGGTAAAGGGACTTCTTTTCAAAGTTCATCTTCAGATGAAGACATTGTTTTGCCAATGACTGCTAAGCAAATGGAACATAGGAAAAAAATATAG 1926 41.85 MATVQRVAQSSVSASPINYGLSKASGGSGGNAVVSDQFPEGLRVLVVDDDATCLRILEQMLRRCLYHVTTCSQASVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEYVGLEMDLPVIMMSADKRTSAVMKGIRHGACDYLIKPISYEELKNIWQHVVRKKWNEYKELENSGSLEDNDKQKRGTGDAEYACSAHEGEEGISQTTKRRSSTKEEDSELENDDPSVSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQTFPNIYFGPFEQNVKLDSFGVEALAVAGQIPPQTLAAMHAELFGQQMGNLLPPMDQTAVLQASSQGPKCMTIEHDAVNPFSQTLVKHQTSDSKTYSPSIISVDDVTSGYSGAWPSKTLSVIGPNNHVRMSSQDSNMLVGIMQEQQQHKQYQEWQQQQKQHPHQHQQQLILSELSSSINVQPSCLVLPSQPSVNLLPENSPDSAKQNHSINRGIIIDYSLAPPQHNCLMSNFNQISDGDLKPLNTFSATGYSAQVLGSPKSSYSVTDTNNYVGLVRTSRVTFTAGSQLSGVVRKSDKQGSYGSKSEEILDHGHLRNLGFVGKGTSFQSSSSDEDIVLPMTAKQMEHRKKI 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11099972 11105092 + BLOR00772 Blo01g00772 55212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00772 641 SUPERFAMILY CheY-like 40 166 IPR011006 -
Blo01g00772 641 MobiDBLite consensus disorder prediction 173 224 - -
Blo01g00772 641 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 37 489 - -
Blo01g00772 641 Gene3D - 42 179 - -
Blo01g00772 641 Pfam Myb-like DNA-binding domain 229 277 IPR001005 -
Blo01g00772 641 CDD REC_typeB_ARR-like 44 158 - -
Blo01g00772 641 Pfam Response regulator receiver domain 44 152 IPR001789 GO:0000160
Blo01g00772 641 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 283 IPR017930 -
Blo01g00772 641 SMART REC_2 42 154 IPR001789 GO:0000160
Blo01g00772 641 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 227 280 IPR006447 GO:0003677
Blo01g00772 641 Gene3D - 223 286 - -
Blo01g00772 641 ProSiteProfiles Response regulatory domain profile. 43 158 IPR001789 GO:0000160
Blo01g00772 641 SUPERFAMILY Homeodomain-like 225 284 IPR009057 -
Blo01g00772 641 MobiDBLite consensus disorder prediction 199 224 - -
Blo01g00772 641 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 489 IPR045279 GO:0009736
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00060 Blo-Chr1:747686 Blo01g00772 Blo-Chr1:11099972 1.58E-128 dispersed
Blo01g00772 Blo-Chr1:11099972 Blo12g00090 Blo-Chr12:6259518 9.23E-125 dispersed
Blo10g00058 Blo-Chr10:579246 Blo01g00772 Blo-Chr1:11099972 3.61E-30 transposed
Blo13g01068 Blo-Chr13:32873275 Blo01g00772 Blo-Chr1:11099972 2.90E-24 transposed
Blo16g00756 Blo-Chr16:31212837 Blo01g00772 Blo-Chr1:11099972 1.88E-175 transposed
Blo16g01182 Blo-Chr16:40356446 Blo01g00772 Blo-Chr1:11099972 5.84E-93 transposed
Blo01g00772 Blo-Chr1:11099972 Blo16g00755 Blo-Chr16:31209733 9.54E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11878 PF00072 Response_reg 9.30E-23 CL0304 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00772 - K14491 vvi:100250832 695.656