Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00776 ATGGCTATGAGACCTGCCCCGAAAAATCTCTCGTTTCAGATTCTTTGCAGAAGCAGTTCGCTTGAAGAAGAAGACGAATCCCTCTTATACCGTTCTAAATCCAAGCTAACTCCGATTTATGCCGAGCCATCTAAATCCCCGCTTCTTCAGGAGAATTGTAATCCAAATAGAACAAAGCACAAAGGTTCCAAGAAGAGGAAGAAGAAGAAACAGGCGATGGAATGCTCTATTCCAGAGGATTCGATCGTCGAAAAGCGCATTGATTCCAGTTTTGTTGATACTGATTCGAAAAGAACGCAATTGTTTTCTGAAAACAAGGAAAGCTGTTTAACCAAACGATTAGAATCGGAGTTGAGCTATCAAAATCTTCGTATTGGGAATGCTTGTTGTGAAGAGATAACTGTGCCGGAGGAAAGAACAGCTGTGTGTAGGGTGACACAATCTACGACACCAGGGTATCAAACTCCCCTAGGCGACCAGTTTAGTTTAGGGGAGTTGAGGCAGAGGAATTTGAATGTCGATGATCCTTCATCAAGAGCTGAAATCAATGTGAAGGACGAGAGGATCATGGAAGTGAATTCAGAGGGGAAACAAAGATGCGAGCCAAATGGGTGCGAGGTCCCGAGATTGGGGACTGCTGACTCGCTCGATTGGAAGCAGCTAATCGACAGTGATCCAAAGTATATGGATTCAGTGGAGAAGTCACAGGTGAATTACTTGATGAAAGAAATGTTCAATGGGAATTCATTGCAGAGCACTACTACTTTGGGAAGTGAGAAAGAACGGGAAAGGGTTTATGATACAATATTTCGCTTGCCATGGAGATGTGAATTGCTTATAGATGTTGGTTTCTTTGTTTGCTTCGACTCGTTTATTTCATTGTTAACCATCATGCCAACGAGGATGGCACTAATCTTTTGGAAGCTTATAATAAAAAGGCAGTTCAAGAGACCGTCTGCAGTGGAGCTATCTGATTTTGGCTGTTTTTTGATTATGGCTAGTGGAGTCACTCTTTTGCAGCGCACAGATATCAGCTTAATATATCATATGATACGTGGTCAGGGAACAATTAAACTATATGTTGTCTACAATGTATTGGAGATATTTGATAAACTCTGTCAAAGTATCGGAGGAGATGTGTTGCAGACTTTATTTTATTCAGCAGAAGGGCTAGCTAATAGTTCACCTGAAAATGTCAGATTCTGGATCTGGAGATTTGTTTCTGACCAAGCTTTAGCTGTGGCTGCCTCTAATATCTGTACTCAAGCAATCACATTTTCAACCTGTATTGTTGCTCATAATAATGCTTTGCTGGCATTGCTGGTTTCCAACAATTTTGCTGAGATAAAAAGCAATGTCTTTAAGCGATTTAGCAAAGAAAACATACGCAGTTTAGTTTACTTTGATTCGATTGAAAGATTCCACATTTCAGCATTTGTTTTATTTGTTTTAGCGCAAAATATTTTGGAGGCCGAGGGTCCCTGGTTTGAAACTTTTCTTTCAAATGCTCTTTTGGTTTACGTTTGTGAAATGCTCATTGACATCATCAAACATTCATTCTTGGCAAAATTCAACGATGTTAAGCCAATGGCTTATTCTGAGTTTCTCGAAGATCTCTGTCAACAGGCTTTAAATAAACGAAGTGAGGATGCAAAGAAAAACCTTACCTTCATCCCTCTTGCACCTGCTTGTGTGGTTATCCGAGTGTTAACTCCACTTTTTGCGGCTCTTCTTCCGTGTAACCCCCTTCCATGGAGGCCATTCTGTATAGTTGTGCTCGTGGGGATGAGCTATGTTATGCTTGCAAGCCTGAAGGCGATGATTGGAATGGGTTTGCAAAAGTTTTCCGCTTGGCATTGTGCGACTGCTCATGTTCTTCATCGGCACCTTCAGATATGCAGATATGCATATCATGATGTCGTTCGTCTTCACGAAGTTCAAAAGTTTCTTGATTGTTCTAAGATTCAGAGTAGGAATTGCCAAATGAAAAATGATTTGATTATTCAGACGCACAAAATCAATGGTGAAAAAGCCGTACACCTGAATCCTCGTCCGCACACCAAAGACGCAAAAGCATCGACAAAATCAAAGATTGGCGGTGCTACTTGTGAAGCTTGTGGGAGATGTATGCACGACGATAACAACAGCTTCTGCTCCATCGCTTGCAAAGTTTCTATGAATGTTAAAGACCAGAGCCAAAGTTTGGTAGCAGCTTCTACCCGTCAATATGAGCAAGTGTCGTCGAAAGAAAAGCACTCCGCCGACACAAATGCGAGTGAAGTGGAGTCGTCTATCTCAGTGGCTGAGTCTGCCGAAGAGACAAACCCCGGGCCTCCTGGTTCATCCTTGAACCGAATAAAGCAGTCGCACAAGAGGAAGGGCTCTTCTCCTCTAAGGGCTCCTCTCGGTTGA 2412 42.16 MAMRPAPKNLSFQILCRSSSLEEEDESLLYRSKSKLTPIYAEPSKSPLLQENCNPNRTKHKGSKKRKKKKQAMECSIPEDSIVEKRIDSSFVDTDSKRTQLFSENKESCLTKRLESELSYQNLRIGNACCEEITVPEERTAVCRVTQSTTPGYQTPLGDQFSLGELRQRNLNVDDPSSRAEINVKDERIMEVNSEGKQRCEPNGCEVPRLGTADSLDWKQLIDSDPKYMDSVEKSQVNYLMKEMFNGNSLQSTTTLGSEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFISLLTIMPTRMALIFWKLIIKRQFKRPSAVELSDFGCFLIMASGVTLLQRTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSIGGDVLQTLFYSAEGLANSSPENVRFWIWRFVSDQALAVAASNICTQAITFSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKENIRSLVYFDSIERFHISAFVLFVLAQNILEAEGPWFETFLSNALLVYVCEMLIDIIKHSFLAKFNDVKPMAYSEFLEDLCQQALNKRSEDAKKNLTFIPLAPACVVIRVLTPLFAALLPCNPLPWRPFCIVVLVGMSYVMLASLKAMIGMGLQKFSAWHCATAHVLHRHLQICRYAYHDVVRLHEVQKFLDCSKIQSRNCQMKNDLIIQTHKINGEKAVHLNPRPHTKDAKASTKSKIGGATCEACGRCMHDDNNSFCSIACKVSMNVKDQSQSLVAASTRQYEQVSSKEKHSADTNASEVESSISVAESAEETNPGPPGSSLNRIKQSHKRKGSSPLRAPLG 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11223594 11233750 - BLOR00776 Blo01g00776 55216

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00776 803 MobiDBLite consensus disorder prediction 46 75 - -
Blo01g00776 803 MobiDBLite consensus disorder prediction 758 785 - -
Blo01g00776 803 Pfam Eukaryotic membrane protein family 321 618 IPR008010 -
Blo01g00776 803 MobiDBLite consensus disorder prediction 746 803 - -
Blo01g00776 803 Pfam PLATZ transcription factor 634 724 IPR006734 -
Blo01g00776 803 PANTHER UNCHARACTERIZED 6 764 IPR008010 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00776 - - - csv:101205806 728.398
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00776 Blo16g00764 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00776 Blo-Chr1:11223594 Blo19g00191 Blo-Chr19:8580144 8.26E-17 dispersed
Blo01g00776 Blo-Chr1:11223594 Blo16g00764 Blo-Chr16:31668661 4.45E-84 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g527 Blo01g00776 Blo16g00764 Bda01g01788 Bda11g00194 Bpe13g01000 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0345 . . . . . . . . Bda11g00194 . Bpe02g01965 Bma01g00494 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004907 2 3 2 1 2 0 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 0 0 1 2 1 1 2 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11879 PF05346 DUF747 1.40E-74 No_clan Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00776 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0