Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00828 ATGCCTACTTATACAGCTTACGCCAGATTATCAAGAGCTTTTCGCCGTCAATCTTCGCTATCTAAACTGCTCATCGTCTTCACCGTCAGTGGCGGGAGCCTGGTGGCTTATGCTGATGCCAACGCAACCGAAAATGTTAGTAAAGTTTCATCTGAATCAGATGTGGTTAAGAAAAAGAAAGTGGTAGTGCTTGGAACTGGTTGGGCCGGAACAAGTTTCTTGAAGAATCTTAACGATCCCTCATATGAAGTTCAAGTGGTATCCCCTCGGAATTACTTTGCATTCACTCCTTTGTTGCCAAGCGTCACATGTGGAACAGTTGAAGCCCGCAGCATTGTGGAACCAATCCGTAAAATGGTCAGGAAGAAAAATGTGGATATTCAATTCTGCGAAGCTGAATGTTACAAGATTGATGCAGAAAACAAGAAAGTTTTTTGTAGATCTAATCAAACCAACAATCTGAATGGGAAAAAAGAATTTGTAATAGACTACGACTTCCTCGTAATATCTGTCGGAGCACAGGTTAATACATTCAACACTCCTGGTGTGGTGGAGAATTGTCATTTCTTAAAGGAAGTGGAAGATGCTCAAAGAATTCGAAGGACTGTTATTGACTGTTTTGAGAGGGCGAGTTTACCAACATTAGAAGATGCCGAACGAGCAAGAATTCTTCACTTTGCTGTTGTTGGTGGTGGTCCAACTGGTGTAGAATTTGCTGCGGAGCTTCATGATTTTGTCAATGAGGATTTAACAAAATTATATCCTGGAGTTAAAGAACTAGTAAAGATAACTCTTCTTGAGGCCGGAGATCATATTTTGAACATGTTTGACAAAAGAATTACAGCTTTTGCCGAAGACAAATTTCAAAGAGACGGTATTGATGTCAGAACAGGATCAATGGTTGTCAAAGTAACTGATAAAGAAATTTCTACTAAAGAAATGAAAAGTGGAGAGGTTTCTTCAATACCTTATGGAATGGTTGTATGGTCAACTGGCATTGGGACTCGCCCCTTCATCAAAGACTTTATGGCACAGATCGGTCAGACTAACCGGCGTGCTTTGGCAACTGATGAATGGCTGCGAGTCGAAGGACGCAGTAATGTGTATGCACTTGGTGACTGTGCAACAATAAACCAGCGTAAAGTCATGGAAGATATTTCTTCAATCTTTGGCAAGGCGGACAAGGACAATTCTGGGACACTTACAGTCAAAGAATTTCAAGAAGTAATCGATGATATCTGTGAGAGGTATCCTCAGGTGGAGCTTTATTTAAAGAATAAGCAGATGGGAAACATAGTTGATCTTTTGAAGGAGTCAAAAGGGAATGTTGCGAAGGAATCCATTGAATTGAACATTGAAGAATTTAAATCAACTCTTTCCCAAGTGGATTCACAAATGAAGAATCTTCCGGCAACAGCACAGGTGGCAGCTCAGCAAGGAGTTTATCTTGCTAAATGTTTTAACCGTATGGAAGAGTGTGAAAAGAATCCAGAGGGTCCTCTCAGATTCAGGGAAACAGGCCGCCATCGATTTCATCCCTTTCGGTATAAGCATCTGGGACAGTTTGCGCCATTGGGTGGAGAGCAAACAGCTGCTCAACTTCCTGGAGATTGGGTGTCCATTGGCCATAGCAGCCAGTGGCTTTGGTATTCTGTTTATGCGAGTAAGCAAGTGAGTTGGAGGACGAGGGCATTGGTGGTATCAGATTGGGGAAGGCGTTTTATCTTTGGAAGAGATTCTAGTCGCATCTGA 1752 42.01 MPTYTAYARLSRAFRRQSSLSKLLIVFTVSGGSLVAYADANATENVSKVSSESDVVKKKKVVVLGTGWAGTSFLKNLNDPSYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRKMVRKKNVDIQFCEAECYKIDAENKKVFCRSNQTNNLNGKKEFVIDYDFLVISVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLEDAERARILHFAVVGGGPTGVEFAAELHDFVNEDLTKLYPGVKELVKITLLEAGDHILNMFDKRITAFAEDKFQRDGIDVRTGSMVVKVTDKEISTKEMKSGEVSSIPYGMVVWSTGIGTRPFIKDFMAQIGQTNRRALATDEWLRVEGRSNVYALGDCATINQRKVMEDISSIFGKADKDNSGTLTVKEFQEVIDDICERYPQVELYLKNKQMGNIVDLLKESKGNVAKESIELNIEEFKSTLSQVDSQMKNLPATAQVAAQQGVYLAKCFNRMEECEKNPEGPLRFRETGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13210812 13215479 - BLOR00828 Blo01g00828 55268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00828 583 SUPERFAMILY EF-hand 337 469 IPR011992 -
Blo01g00828 583 SUPERFAMILY FAD/NAD(P)-binding domain 220 378 IPR036188 -
Blo01g00828 583 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Blo01g00828 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
Blo01g00828 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Blo01g00828 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Blo01g00828 583 PANTHER NADH DEHYDROGENASE 4 583 IPR045024 GO:0003954|GO:0006116
Blo01g00828 583 SUPERFAMILY FAD/NAD(P)-binding domain 58 277 IPR036188 -
Blo01g00828 583 PANTHER NAD(P)H DEHYDROGENASE B2 4 583 - -
Blo01g00828 583 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 383 IPR023753 GO:0016491
Blo01g00828 583 Gene3D - 425 582 - -
Blo01g00828 583 Gene3D - 49 404 - -
Blo01g00828 583 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00828 Blo-Chr1:13210812 Blo02g00094 Blo-Chr2:641902 0 dispersed
Blo04g00667 Blo-Chr4:6002453 Blo01g00828 Blo-Chr1:13210812 0 transposed
Blo01g00828 Blo-Chr1:13210812 Blo08g00186 Blo-Chr8:2125914 1.89E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00828 K03885 - csv:101204145 1006.51