Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00843 ATGGCCAAACCACGTTTCTTTACTCTTCTCCCTCTTTTCCTTCTTTTTCAACCCATTTTCTCCGTTGATTTCCTCTTCAACGGCTTCAATTCTTCCGCTCTCTGGCTTTACGGCAACTCCTCCATTGATTCCCGTGTTTTGACGCTCACCAACAAGACCAGCTTTTCCATCGGCCGTGCTCTTTTTCCCATGAAGATTCCAGTCAAGGAACCTAATTCCTCATATGTCTACCCCTTTTCCACTTCTTTTATCTTTGCAATGGCGCCTTACAAGAATACTCTTCCTGGCCATGGCATGGTTTTCATATTTGTTCCTTCTACCGGAATAAACGGCACTAGCTCTGCTCAAAACTTAGGTCTATTTAACTTCACGAACAACGGAAGTCCGGACAATCACGCGCTCGGCGTGGAATTCGATGTGTTTTCCAATCAGGAATTCAATGATATAAACGCTAACCATGTTGGAATCGATGTGAATTCTCTCACATCAGTTGCTGCCAATAATTCTGGTTACTGGCCCGACGATTCTTCCAGTTTCGAAGAATTGAAGCTAAACAGCGGTGAAAATTACCAGGTTTGGATCGATTATTCCGATTCTGTACTTAATGTGACCATAGCGCCAGCAGGTATTAGACGGCCGAGGCGGCCATTGATGAATGTTACACTGAATATCTCTGAAGTGTTTCTGGATGAAATGTATGTTGGCTTTACGGCTTCAACTGGACAGCTAGTTGAAAGCCATAAAGTCTTAGCTTGGAGTTTCAGTAACTCGAATTTTTCTCTAAGCGAGAGTTTGATCACTACTGGTTTGCCTTCCTTCGTTCTTCCAGAAGATCCAATTTATCAATCCAAATGGTTTATCATAGGATTTGCAGTAGGAGGTTTTCTTCTTCTTTGCTCTTTCGCTTTAGTTTCCTATTTTATGATCGCAAGGTGTTTGCAAAATGCCAAAGAGAGAAGGGAGATGGAAGAATGGGAGTTGGAGTATTGGCCTCACCGGATTTCATATCACGAAATCGAGAAATCAACGAAGGGATTTAAAGAAGAGAATGTAATTGGAATTGGAGGGAATGGGAAGGTTTTCAAGGGCATTTTATCGGGAGGAGCAAAGATAGCGGTGAAGCGCATTTCGCCTGGCAACGACGGGCTGAGAGAATTCTTGGCCGAAATTTCAACCATTGGAAGATTGAAGCACAGAAATTTGGTGGGTTTGAAAGGATGGTGTAAAAAAGAGAAAGGAACCTTCTTGCTGATCTATGATTATATGGAGAATGGAAGCTTAGACAAAAAAATATTTGAAGGCGAAAATAACAAGATGCTAAGTTGTGAAGAAAGGATAAGAATTCTTAAAGAAGTAGCTTCTGGGGTGTTGTATTTACATGAAGGGTGGGAGTCTCAAGTTCTACACAGAGACATCAAAGCCAGCAATGTTCTACTTGACAAAGACATGAAAGGACGGCTCGGAGATTTCGGGCTAGCACGAGTCCACGGCCATAGCCAAGTGGCTAGCACAACGAAGGTGGTGGGCACAGTCGGGTACTTAGCCCCCGAAGTGATCAAAAGTGGGCGAGCCTCAACTCAAACAGATGTATTTGGGTTTGGAGTATTGATTTTAGAAGTAATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCTTCTTTAATACATTGGGTATGGCAAATGATGGAAAAGAACCAATTATGTGATGCTTTAGATGAAAAACTGAGGAACTTTTCGGGCAAGTTGGACAAGGAAGAGGTCGAGAAGGTGCTTCATTTAGGCTTGCTTTGTGCATATCCCGAACCGAGTGCTCGGCCCACAATGAGACAAGTCGTGAAGATATTGGAGGGAAAAAGCGACTCGAACGAGCCGGAAACGGAAGCCATGGATGCATATTTGCTCGATCGGATGCAATCGAAGGGCATTTGGGATCAATTTACACAGGCCTACGGCTATGGATCATCACACCCAACATTTGATGACTTCAAACAAGACAACTCAATGTCTCTAGCTTGGTCCAACTCTGATGTCTCTGGCAGGTAA 2043 43.61 MAKPRFFTLLPLFLLFQPIFSVDFLFNGFNSSALWLYGNSSIDSRVLTLTNKTSFSIGRALFPMKIPVKEPNSSYVYPFSTSFIFAMAPYKNTLPGHGMVFIFVPSTGINGTSSAQNLGLFNFTNNGSPDNHALGVEFDVFSNQEFNDINANHVGIDVNSLTSVAANNSGYWPDDSSSFEELKLNSGENYQVWIDYSDSVLNVTIAPAGIRRPRRPLMNVTLNISEVFLDEMYVGFTASTGQLVESHKVLAWSFSNSNFSLSESLITTGLPSFVLPEDPIYQSKWFIIGFAVGGFLLLCSFALVSYFMIARCLQNAKERREMEEWELEYWPHRISYHEIEKSTKGFKEENVIGIGGNGKVFKGILSGGAKIAVKRISPGNDGLREFLAEISTIGRLKHRNLVGLKGWCKKEKGTFLLIYDYMENGSLDKKIFEGENNKMLSCEERIRILKEVASGVLYLHEGWESQVLHRDIKASNVLLDKDMKGRLGDFGLARVHGHSQVASTTKVVGTVGYLAPEVIKSGRASTQTDVFGFGVLILEVMCGRRPIEEGKPSLIHWVWQMMEKNQLCDALDEKLRNFSGKLDKEEVEKVLHLGLLCAYPEPSARPTMRQVVKILEGKSDSNEPETEAMDAYLLDRMQSKGIWDQFTQAYGYGSSHPTFDDFKQDNSMSLAWSNSDVSGR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14792473 14794515 + BLOR00843 Blo01g00843 55283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00843 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 261 IPR013320 -
Blo01g00843 680 Gene3D Transferase(Phosphotransferase) domain 1 422 638 - -
Blo01g00843 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 8 672 - -
Blo01g00843 680 PANTHER - 8 672 - -
Blo01g00843 680 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Blo01g00843 680 SUPERFAMILY Protein kinase-like (PK-like) 323 616 IPR011009 -
Blo01g00843 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Blo01g00843 680 CDD STKc_IRAK 352 617 - -
Blo01g00843 680 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00843 680 SMART serkin_6 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00843 680 Gene3D - 20 264 - -
Blo01g00843 680 Coils Coil 568 588 - -
Blo01g00843 680 CDD lectin_legume_LecRK_Arcelin_ConA 22 252 IPR001220 GO:0030246
Blo01g00843 680 Pfam Legume lectin domain 22 259 IPR001220 GO:0030246
Blo01g00843 680 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00843 680 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00843 Blo-Chr1:14792473 Blo12g00422 Blo-Chr12:21588927 7.82E-166 dispersed
Blo12g00397 Blo-Chr12:20953304 Blo01g00843 Blo-Chr1:14792473 1.52E-14 dispersed
Blo01g00843 Blo-Chr1:14792473 Blo15g00253 Blo-Chr15:2616308 6.62E-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84095 PF00069 Pkinase 1.40E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00843 - - pop:7477402 969.533