Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00856 | ATGGCGGATTCCAACAAAAAAACCATTGCCAACAAGCAAGATAAAGCCGGTCTTCTCCTTGGACGCTATGAGGTGGGCAAGCTTCTCGGCCATGGGACCTTCGCTAAAGTCTACCGCGCCCGCAACGTAAAGTCAGACGAAATCGTCGCCATTAAAGTCCTCGACAAGGAGAAGATCCAAAAAAATGGCCTCATCGCCCATATCAAACGAGAAATCTCGATCCTCCGCCGTCTCCGCCACCCGAATATTGTCCGGCTTTTCGAAGTTATGGCGACCAAAGGGAAGATCTACTTCGTAATGGAGTATGTTCGAGGTGGCGAGCTTTTCAACAAAGTGGCCAAAGGACGACTAAGAGAAGAACAAGCTCGCAAGTACTTCCAACAGCTAATCTCTGCCGTCGGATTCTGTCATTCACGAGGAGTCTACCATCGGGATCTTAAACCGGAGAATCTCCTTCTAGACGAAAACGGCGACCTAAAAGTCTCCGATTTCGGTCTAAGCGCCGTTTCCGATCAGATTCGGAAGGACGGTCTCTTCCACACATTTTGCGGTACACCGGCGTACGTTGCACCAGAAGTTTTGGCCAGAAAGGGTTATGAAGCTTCAAAATTCGACATATGGTCTTGTGGAATTATTCTCTTCGTTCTAATGGCCGGATATTTGCCATTTCAGGATCCAAATATCATGCAAATGTATAAAAAAATTTATCGGGGAGAATTCCGATCACCGAGATGGTTCTCGCCGGAGCTAATCCGACTACTGAAACGCCTTCTCGATGTAAATCCAGAAACCCGGATTACAATACCGGAGATTATGGAAAACAAATGGTTCAAAAAAGGGTTCAAGCAGGTAAAATTTTACATAGAAGACGACAAGCTCTGCAATATGGAAGATTCCGGCGAACATATTGATTCATTGCCTGAAAGAGAGCCGGAGAAAATCGAAGAACGGAGGAAACGTTCGCCTTTAACTCGTCCGGCGAGCTTGAACGCGTTTGATATAATTTCATTTTCGCGAGGTTTCGATCTTTCTTCGCTCTTTGAGGATAACGGGGAGGAAGCGAGGGTGGTCACCGGAATTCCAGTGAAGAAGATTATAGCAAAGTTGGAGGAGATAGCGAAGGTGGTGAGTTTTACAGTGAGGAAGAAGGATTGCAGAGTCAGAATGGAGGGGACGAGGGAAGGAGAGAGAGGTCCGTTGAGTATAGCGGCGGAGATATTTGAGTTGACGCCGTCGTTGATGGTTGTGGAGGTGAAGAAAAAAGGAGGAGATAAAGTAGAGTATGAACAGTTTTGTAAAAGAGAATTGACGCCATTGTTGCACAGCTTGGAGCTCCAAGAATCTCCATCGTCCTCCCATTTACCTTCTGATTCTGAATAA | 1380 | 46.38 | MADSNKKTIANKQDKAGLLLGRYEVGKLLGHGTFAKVYRARNVKSDEIVAIKVLDKEKIQKNGLIAHIKREISILRRLRHPNIVRLFEVMATKGKIYFVMEYVRGGELFNKVAKGRLREEQARKYFQQLISAVGFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRKDGLFHTFCGTPAYVAPEVLARKGYEASKFDIWSCGIILFVLMAGYLPFQDPNIMQMYKKIYRGEFRSPRWFSPELIRLLKRLLDVNPETRITIPEIMENKWFKKGFKQVKFYIEDDKLCNMEDSGEHIDSLPEREPEKIEERRKRSPLTRPASLNAFDIISFSRGFDLSSLFEDNGEEARVVTGIPVKKIIAKLEEIAKVVSFTVRKKDCRVRMEGTREGERGPLSIAAEIFELTPSLMVVEVKKKGGDKVEYEQFCKRELTPLLHSLELQESPSSSHLPSDSE | 459 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 15824251 | 15825630 | + | BLOR00856 | Blo01g00856 | 55296 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00856 | 459 | Gene3D | Kinase associated domain 1, KA1 | 328 | 443 | - | - | |
Blo01g00856 | 459 | Pfam | NAF domain | 326 | 382 | IPR004041 | GO:0007165 | |
Blo01g00856 | 459 | MobiDBLite | consensus disorder prediction | 299 | 322 | - | - | |
Blo01g00856 | 459 | Gene3D | Transferase(Phosphotransferase) domain 1 | 13 | 327 | - | - | |
Blo01g00856 | 459 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 292 | IPR011009 | - | |
Blo01g00856 | 459 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 16 | 447 | - | - | |
Blo01g00856 | 459 | ProSiteProfiles | Protein kinase domain profile. | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo01g00856 | 459 | ProSiteProfiles | NAF domain profile. | 324 | 348 | IPR018451 | GO:0007165 | |
Blo01g00856 | 459 | PANTHER | - | 16 | 447 | - | - | |
Blo01g00856 | 459 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672|GO:0006468 | |
Blo01g00856 | 459 | SMART | serkin_6 | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo01g00856 | 459 | ProSitePatterns | Protein kinases ATP-binding region signature. | 29 | 52 | IPR017441 | GO:0005524 | |
Blo01g00856 | 459 | CDD | CIPK_C | 330 | 440 | - | - | |
Blo01g00856 | 459 | Pfam | Protein kinase domain | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g00856 | Blo14g00880 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00856 | Blo-Chr1:15824251 | Blo08g00601 | Blo-Chr8:21851254 | 0 | dispersed | |
Blo10g00425 | Blo-Chr10:7577490 | Blo01g00856 | Blo-Chr1:15824251 | 2.32E-37 | dispersed | |
Blo01g00856 | Blo-Chr1:15824251 | Blo13g01018 | Blo-Chr13:32525053 | 7.15E-173 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84097 | PF00069 | Pkinase | 2.30E-77 | CL0016 | Blo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00856 | - | - | csv:101214053 | 689.878 |