Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00856 ATGGCGGATTCCAACAAAAAAACCATTGCCAACAAGCAAGATAAAGCCGGTCTTCTCCTTGGACGCTATGAGGTGGGCAAGCTTCTCGGCCATGGGACCTTCGCTAAAGTCTACCGCGCCCGCAACGTAAAGTCAGACGAAATCGTCGCCATTAAAGTCCTCGACAAGGAGAAGATCCAAAAAAATGGCCTCATCGCCCATATCAAACGAGAAATCTCGATCCTCCGCCGTCTCCGCCACCCGAATATTGTCCGGCTTTTCGAAGTTATGGCGACCAAAGGGAAGATCTACTTCGTAATGGAGTATGTTCGAGGTGGCGAGCTTTTCAACAAAGTGGCCAAAGGACGACTAAGAGAAGAACAAGCTCGCAAGTACTTCCAACAGCTAATCTCTGCCGTCGGATTCTGTCATTCACGAGGAGTCTACCATCGGGATCTTAAACCGGAGAATCTCCTTCTAGACGAAAACGGCGACCTAAAAGTCTCCGATTTCGGTCTAAGCGCCGTTTCCGATCAGATTCGGAAGGACGGTCTCTTCCACACATTTTGCGGTACACCGGCGTACGTTGCACCAGAAGTTTTGGCCAGAAAGGGTTATGAAGCTTCAAAATTCGACATATGGTCTTGTGGAATTATTCTCTTCGTTCTAATGGCCGGATATTTGCCATTTCAGGATCCAAATATCATGCAAATGTATAAAAAAATTTATCGGGGAGAATTCCGATCACCGAGATGGTTCTCGCCGGAGCTAATCCGACTACTGAAACGCCTTCTCGATGTAAATCCAGAAACCCGGATTACAATACCGGAGATTATGGAAAACAAATGGTTCAAAAAAGGGTTCAAGCAGGTAAAATTTTACATAGAAGACGACAAGCTCTGCAATATGGAAGATTCCGGCGAACATATTGATTCATTGCCTGAAAGAGAGCCGGAGAAAATCGAAGAACGGAGGAAACGTTCGCCTTTAACTCGTCCGGCGAGCTTGAACGCGTTTGATATAATTTCATTTTCGCGAGGTTTCGATCTTTCTTCGCTCTTTGAGGATAACGGGGAGGAAGCGAGGGTGGTCACCGGAATTCCAGTGAAGAAGATTATAGCAAAGTTGGAGGAGATAGCGAAGGTGGTGAGTTTTACAGTGAGGAAGAAGGATTGCAGAGTCAGAATGGAGGGGACGAGGGAAGGAGAGAGAGGTCCGTTGAGTATAGCGGCGGAGATATTTGAGTTGACGCCGTCGTTGATGGTTGTGGAGGTGAAGAAAAAAGGAGGAGATAAAGTAGAGTATGAACAGTTTTGTAAAAGAGAATTGACGCCATTGTTGCACAGCTTGGAGCTCCAAGAATCTCCATCGTCCTCCCATTTACCTTCTGATTCTGAATAA 1380 46.38 MADSNKKTIANKQDKAGLLLGRYEVGKLLGHGTFAKVYRARNVKSDEIVAIKVLDKEKIQKNGLIAHIKREISILRRLRHPNIVRLFEVMATKGKIYFVMEYVRGGELFNKVAKGRLREEQARKYFQQLISAVGFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRKDGLFHTFCGTPAYVAPEVLARKGYEASKFDIWSCGIILFVLMAGYLPFQDPNIMQMYKKIYRGEFRSPRWFSPELIRLLKRLLDVNPETRITIPEIMENKWFKKGFKQVKFYIEDDKLCNMEDSGEHIDSLPEREPEKIEERRKRSPLTRPASLNAFDIISFSRGFDLSSLFEDNGEEARVVTGIPVKKIIAKLEEIAKVVSFTVRKKDCRVRMEGTREGERGPLSIAAEIFELTPSLMVVEVKKKGGDKVEYEQFCKRELTPLLHSLELQESPSSSHLPSDSE 459
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 15824251 15825630 + BLOR00856 Blo01g00856 55296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00856 459 Gene3D Kinase associated domain 1, KA1 328 443 - -
Blo01g00856 459 Pfam NAF domain 326 382 IPR004041 GO:0007165
Blo01g00856 459 MobiDBLite consensus disorder prediction 299 322 - -
Blo01g00856 459 Gene3D Transferase(Phosphotransferase) domain 1 13 327 - -
Blo01g00856 459 SUPERFAMILY Protein kinase-like (PK-like) 19 292 IPR011009 -
Blo01g00856 459 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 447 - -
Blo01g00856 459 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00856 459 ProSiteProfiles NAF domain profile. 324 348 IPR018451 GO:0007165
Blo01g00856 459 PANTHER - 16 447 - -
Blo01g00856 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Blo01g00856 459 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00856 459 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Blo01g00856 459 CDD CIPK_C 330 440 - -
Blo01g00856 459 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo01g00856 Blo14g00880 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00856 Blo-Chr1:15824251 Blo08g00601 Blo-Chr8:21851254 0 dispersed
Blo10g00425 Blo-Chr10:7577490 Blo01g00856 Blo-Chr1:15824251 2.32E-37 dispersed
Blo01g00856 Blo-Chr1:15824251 Blo13g01018 Blo-Chr13:32525053 7.15E-173 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84097 PF00069 Pkinase 2.30E-77 CL0016 Blo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00856 - - csv:101214053 689.878