Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00866 ATGGAAACCTCAAATAATCAATACCTAATTATCAGTGAGCAAGAAAACGGCTCGGAGTCTCCTCCATCCGCCATTTTCAACAAGTTCATCTCCTCATCTTCCCCCAAAAAGAGCAGTAGAAGATCCATTAACAAAAGGGTTGTTTCAGTGCCACTTAATCTCGAAAGTAACAGCAACACTCCACCCTCTGATTCTTGGGCATGGCGGAAATACGGCCAGAAGCCGATCAAAGGCTCTCCTTACCCAAGAGGATATTATCGTTGTAGTAGCTCGAAGGGTTGCCCAGCTCGAAAACAAGTAGAAAGAAGCAATGTTGACCCGACCATGTTAGTCGTCACATATGCCTGTGAGCATAATCATCCAATTCCGGCCTCGAGAAACAGTCACCACCACTCCGGTGCCGGCACAAAACCCGGATATCAAAAGGTTCTAGCTGACCCAGAACCTGAATCCAATGCTGATGAGAAGATTTTGGATCTTGCCGGCGAGGAAATGGTGATGGAGGATGAGTTCAGCTGGTTTAACGTGATGGAGACAACGACGTCTACGGTTCTGGAGAGCCCAATTTTCAAAGGGACGACCGGAGCTGAGTTGGCGATGTTTTTTCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTGGGTGAATTACCGGAATGTTCCGCTGTGTTCGGGCCCCGCGTAGGAGGAGGAGAGGCAGGACGTTCGAACGGGATGAGGAGCAGCTCCCTCCAGCGTTGTCCCCCACCGTGGTGTGGGGCAACAAGCTGA 774 50.65 METSNNQYLIISEQENGSESPPSAIFNKFISSSSPKKSSRRSINKRVVSVPLNLESNSNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSNVDPTMLVVTYACEHNHPIPASRNSHHHSGAGTKPGYQKVLADPEPESNADEKILDLAGEEMVMEDEFSWFNVMETTTSTVLESPIFKGTTGAELAMFFPMREEDESLFADLGELPECSAVFGPRVGGGEAGRSNGMRSSSLQRCPPPWCGATS 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16706308 16707409 + BLOR00866 Blo01g00866 55306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00866 257 SUPERFAMILY WRKY DNA-binding domain 60 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00866 257 ProSiteProfiles WRKY domain profile. 63 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00866 257 Pfam WRKY DNA -binding domain 64 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00866 257 SMART WRKY_cls 62 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g00866 257 MobiDBLite consensus disorder prediction 1 48 - -
Blo01g00866 257 MobiDBLite consensus disorder prediction 122 152 - -
Blo01g00866 257 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 232 IPR044810 GO:0003700
Blo01g00866 257 MobiDBLite consensus disorder prediction 230 257 - -
Blo01g00866 257 Gene3D WRKY domain 48 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g00866 257 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 12 232 - -
Blo01g00866 257 MobiDBLite consensus disorder prediction 237 251 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00866 Blo14g00436 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00866 Blo-Chr1:16706308 Blo14g00875 Blo-Chr14:32644834 2.10E-62 dispersed
Blo01g00866 Blo-Chr1:16706308 Blo16g00443 Blo-Chr16:17611158 3.57E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11884 PF03106 WRKY 2.00E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00866 - - jre:109010041 280.796