Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00870 ATGACGTCTGGTGCGAGGATGCCGAGTTGGAAGGAGAGGGAGAACAATAAGAGGAGGGAGAGGAGGAGGAGAGCGATCGCAGCGAAGATTTTCTCGGGTTTGAGAATGTACGGAAATTACAAGCTTCCTAAGCACTGCGATAACAATGAAGTTCTTAAAGCTCTCTGCAACGAAGCTGGATGGACCGTCGAAGAAGATGGTACGACCTACAGAAAGCTAGAAGTTTATTGTTTTCAATATATATATATATATATATATATATATATATATCCATTGACTAATTACATATATTTTATAAGTAAATTAGGCTGCAGACCAGTAGACATGGACATCACAGGTGGGTCTGCTTCTGCAAGTCCTTCCTCAACATACTGGCCGAGCCAATGTGCATCGAATGATCCAAGTCCTCCATCTTCCTTTCCACCAAGTCCAAGTTCATCTCATTACACTGCAAAAGTCAATGGAATTCGTGATGCAAATTCCCTCGTCCCATGGCTGATAAACCTCTCACCAGCCTCATTCTCATCCTCGTCTAAGACTCACCATCTTTATATCTCTAGTGGCTCCATTAGTGCCCCAGTCACCCCTCCTTTGAGCTCTCCCACAGCTCGATCTCCTAGAATGAGAAATGGATGCCACGATCCTAAAGCTGGTGCTACCTGCGGTGTAGAACAATTTTCTTACATGCCTTCGTCTACCCCGCCAAGTCCTGGCAGACCAACTCTCACCAATTCGCAATGGCTAGCTGGTGTTCAAATTCCTCAAAGTGGGCCATGCTCTCCCACATTTAGCTTTGTTTCTAGAAACCCATTTGGATTTGGAGAGGAGGCATTATCAGGTGGAGGGTCGAGAATGTGGACCCCAGGTCAAAGTGGGGCATGCTCTCCTGCTGTTGCTTCTGGAGTTGATCAAACATCCGATATTCCGCTGTCAGATGGAATGGCAGCTGAGTTTGCATTTGGAAGCAACACAACTGGGTTGGTGAAACCTTGGGAAGGAGAGAGAATTCATGAGGAATGTGTCTCGGATGATCTTGAACTCACTCTTGGAAACTCAAAAATCAGGTTAGTTTAA 1074 45.34 MTSGARMPSWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKLEVYCFQYIYIYIYIYIYPLTNYIYFISKLGCRPVDMDITGGSASASPSSTYWPSQCASNDPSPPSSFPPSPSSSHYTAKVNGIRDANSLVPWLINLSPASFSSSSKTHHLYISSGSISAPVTPPLSSPTARSPRMRNGCHDPKAGATCGVEQFSYMPSSTPPSPGRPTLTNSQWLAGVQIPQSGPCSPTFSFVSRNPFGFGEEALSGGGSRMWTPGQSGACSPAVASGVDQTSDIPLSDGMAAEFAFGSNTTGLVKPWEGERIHEECVSDDLELTLGNSKIRLV 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17030855 17033555 + BLOR00870 Blo01g00870 55310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00870 357 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 170 IPR008540 -
Blo01g00870 357 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 103 355 IPR033264 GO:0003700|GO:0006351|GO:0009742
Blo01g00870 357 MobiDBLite consensus disorder prediction 1 20 - -
Blo01g00870 357 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 103 355 - -
Blo01g00870 357 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 72 - -
Blo01g00870 357 MobiDBLite consensus disorder prediction 125 146 - -
Blo01g00870 357 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 72 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00870 Blo11g00263 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00870 Blo-Chr1:17030855 Blo10g00726 Blo-Chr10:22920767 8.42E-109 dispersed
Blo07g00989 Blo-Chr7:29408788 Blo01g00870 Blo-Chr1:17030855 4.64E-25 transposed
Blo01g00870 Blo-Chr1:17030855 Blo11g00263 Blo-Chr11:2124865 2.51E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11886 PF05687 BES1_N 4.80E-54 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00870 - - pvy:116128228 455.292