Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00886 ATGCTAGGAAACAAGCATAATTGCAGCAGTCCAACCACTCCAAAAACTCGGTTAGAAAGGCTTCTAAGGGAAAGGGAGTTAAGGAAATCAAATCGATCTTCTCTTGCGAACGAAGAGACAAGAGATGGAAACATTTACGGTAATGATCCATTTGGAAGTGATGGGGAAAATTGGGGTCCTCTTACTAAGGAAGAGATCTTGGAAGGGGAAACATTGGGTAGTGATTTTGGTGATGGATGTGAAAGGCAAGACGGTCGACCCTCTAAACAGCGCTTGCTTGTGGTAGCCAATAGGTTGCCTGTTTCGGCTGTGAGGAAGGGTGAAGATTCATGGCAACTTGAAATTAGTGTGGGTGGATTAGTCAGTGCACTTTTAGGTGTAAAAGAGTTTGATGCAAGATGGATTGGCTGGGCTGGTGTGAATGTACCTGATGAAGTTGGGCAGAGAGCCTTATCAAAAGCCTTGGCTGAGAAGAGATGCATCCCCGTTTTTCTTGAAGAGGAGGTTGTTCATCAATATTACAATGGCTACTGCAACAACATCTTATGGCCTCTTTTCCACTACCTAGGACTTCCACAAGAAGATCGTCTCGCCACCACTCGTAGTTTTCAATCTCAGTTTGATGCGTATAAGAAGGCAAATCAAATGTTTGCTGATGTTGTGAACGAACATTATGAGGAGGGAGATGTTATTTGGTGCCATGATTATCACCTAATGTTTCTTCCAAAATGTCTAAAAGATTATAATAGCAAAATGAAAGTTGGTTGGTTCCTCCATACTCCCTTTCCTTCCTCAGAAATTCATAGGACATTGCCTTCGCGTTCAGAACTTTTGAGATCTGTTCTCACTGCCGATTTAGTTGGTTTCCATACATATGATTATGCGAGGCATTTTGTAAGTGCTTGCACTCGAATTCTTGGACTGGAAGGTACACCTGATGGAGTAGAGGATCAAGGAAAACTGACTCGTGTTGCTGCTTTTCCTATTGGCATAGACTCTGACCGGTTTATTCGGGCTCTGGAACTTCCTCAAGTTCAAGATCACATGAAAGAATTGAAAGAGAGATTTGCTGGTCGAAAGGCAAGAACTTTCTCTCTCCCCTCTCTTTGTATATATTATCACCAGATATTTTCTGTCAAATCCTTTTCTGATTAG 1155 42.25 MLGNKHNCSSPTTPKTRLERLLRERELRKSNRSSLANEETRDGNIYGNDPFGSDGENWGPLTKEEILEGETLGSDFGDGCERQDGRPSKQRLLVVANRLPVSAVRKGEDSWQLEISVGGLVSALLGVKEFDARWIGWAGVNVPDEVGQRALSKALAEKRCIPVFLEEEVVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYEEGDVIWCHDYHLMFLPKCLKDYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLTADLVGFHTYDYARHFVSACTRILGLEGTPDGVEDQGKLTRVAAFPIGIDSDRFIRALELPQVQDHMKELKERFAGRKARTFSLPSLCIYYHQIFSVKSFSD 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17628806 17631094 - BLOR00886 Blo01g00886 55326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00886 384 MobiDBLite consensus disorder prediction 26 60 - -
Blo01g00886 384 Gene3D Glycogen Phosphorylase B; 80 351 - -
Blo01g00886 384 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 77 361 - -
Blo01g00886 384 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 77 361 IPR001830 GO:0003824|GO:0005992
Blo01g00886 384 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 360 - -
Blo01g00886 384 Pfam Glycosyltransferase family 20 91 359 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00886 Blo-Chr1:17628806 Blo19g00010 Blo-Chr19:157188 0 dispersed
Blo01g00886 Blo-Chr1:17628806 Blo03g00701 Blo-Chr3:29737290 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00886 K16055 - mnt:21398701 617.461