Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00894 ATGTCGAGAGGAGTTAGCTCTCTGATTATAAATTCACTCATGGTGGACGCCGCAGCGGCGGCGTGCAGGGAAAATTTTGCCTTTGCAACACACAATGCCATGATGTCATCCAGGGACACCTACGACACTACGGCGTCCGCACAAAACTTTGCCTCTTTTCCATCGCAACACACAACGCTACGACGTTGTCCAGGGAAGGCAAATCAGTTTCGCTTCATTTATGTTGGCTGTTGCAGCTTGTCGAGCTTAATCACTATGTTGGAATCAGTTACTTGTTGCCGTGGCTCTAAGGCATATGATGTTATTAAACAAAAGAACCCAGTTAGGGGATATTCTCCAGCTAATTCACAATTTTGTAGTCCTTCATTTAGTTTGGCATATCACCCCCGGAAGCTGGTGGTTTCTACTTCATTTAGACTATATTGCCAGATAAGTCGATGCTCTCGAATTACCAACATTGGCAGGCCTTCACTAATTTCCTCAGTATGTGGTTGGAGAGAGTGTTATTTATCCAACTATGCACCATTCATCAGCAGTAGATATCGGATTCATGCGGCCCTTGATGTTGCAAGTGCTATTGATGTAATTAATGACTTGGGATTGGATACACTAACATTTTTAGCCGTGACGGTGCTTGTTGTTCCTGCATTCAGAATTGTTAAAGCGAGCCCAATACTTGGTTTCTTCTTTGCTGGAATTGTGCTGAACCAATTTGGCGCGATCAGAAATCTTACTGATGTTAAAGTCCTTTCTGAGTGGGGAATCCTTTTTCTGCTCTTTGAAATGGGTTTAGAACTCTCATTTGCCCGTTTAAAGGCTCTGGCAAAATTTGCCTTTGGCATGGGATTGACTCAGGTGGTGCTATCCACTCTTGCTTTCACTGCCTTTGAACTCCCACCTAATGGAGCCTTTGGAACAAGAATCCTAGAGTTTCTTTTTCACTCGAGGCCTGATTTGGTTAACATAAGAAGTGTTGATGAAGCTATAGTCATTGGTGCTGCACTCTCGTTGTCTTCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAGAAAGGAGAGCTTCCGACAAGATTTGGGTCAGCAACGTTGGGGATACTTCTTCTACAGGACATTGCAGTTGTCCCTCTATTAGTCATTCTTCCGGTGCTAGAGAGCCAGAATTTGGTCCAGGAAAGTATCTGGCCAATGCTTGCCAAAGAAAGCTTAAAGGCTTTGGGTGGATTGGGTCTGCTTTCTCTTGGAGGAAAATTTCTTCTTAGGCGAGTCTTTGAGGTAGTTGCTGAAGCCAGGAGCTCTGAAGCCTTTGTTGCTCTCTGCTTGCTGACAGTTGCTGGGACTTCACTTATTACCCAGAAGTTGGGCTTCAGTGATACGCTCGGAGCATTTTTAGCTGGAGCGATCTTAGCAGAAACAAACTTTCGAACACAGATTGAAGCAGATATTAGGCCATTTCGAGGCCTACTGTTGGGTTTGTTTTTTGTGACTACTGGAACTTCCATTGACATGCAGGTTCTTTTCCGAGAGTGGCCGAATGTACTTTCACTTTTGGCAGGATTAATAGTAATAAAGACAATGATAATAACGGCAATAGGTCCTCGTGTTGGATTGACTTTACAAGAAAGTGTAAGAATTGGATTACTTCTTTCTCAGGGAGGCGAATTTGCCTTTGTCGTTTTTTCACTAGCAAATAGGCTTGGAGTGCTACCTCTTGAGCTTAACAAGCTGCTTATCATTGTTGTTGTGCTATCCATGGCATTAACTCCATTGCTTAATGAAGCTGGAAGAAAGGCAGCTGAATTGATAGATGGCAAGGTTGAACCAGAAAGTAAAACTAAGGAGACTGTAAATTTTGAGGCAACGGAGCCTGTTGTGATTCTTGGGTTTGGGCAAATGGGTCAGGTCCTAGCAAATTTCTTGTCTGCACCATTGGCTTATGGAGAGGATGGAAATGCTGTAGGATGGCCCTATGTTGCTTTTGATCTTAATCCTTCTGTCGTGAAGGCATCTAGAAAACTAGGTTTTCCTATTCTCTATGGGGATGGATCACGCCCTATAGTTTTGCAATCTGCTGGAATTTCTTCTCCAAAAGCTGTAATGATTATGTACACAGAGCGTAAGAGAACGATCGAGGCTGTTCAGAGGCTTCGACTTGCATTCCCTGCAATTCCAATTTATGCTAGAGCAAAAGATCTCATGCATCTCTTAGATCTGAAGAAAGCTGGTGCAACTGATGCTATTCTTGAAGATGCAGAGACAAGTTTACAATTGGGTTCTAGGCTTTTGAAAGGGCTAGGTGTCATGTCAGATGATGTAAGTTTCCTAAGTCAACTTGTTCGGGACTCCATGGAGTTACAAGCTGAAGAAGCACTCAGAAAAACCGATGAGCGAGAGTTAGATGTTATGCAGCCGTTACAGGTAAGGGTAGATGACTTAAACGAAGGCCGACCACCCCGTTCTCTAGCTTCACGAGAAGATGAACTTTTGAGGGTGAATAAGGAAGATGTTTCACATATCCTGAGGCTTCAAGAGGATGCAAATAGAGGCAAGGTTGAGACCGGGATCAGAGACTTGGACGGCGAAGACGGAGTAGGAGTTTTGTATTGTGAACTTGGACTAGACAACAATTTTGATGATAAATCTGAAGATGAAGTGAAGAACTTGGTGGACTCGTCAATCCCTTGCCTCACAGTTCGTGATGAAACTTGA 2703 43.58 MSRGVSSLIINSLMVDAAAAACRENFAFATHNAMMSSRDTYDTTASAQNFASFPSQHTTLRRCPGKANQFRFIYVGCCSLSSLITMLESVTCCRGSKAYDVIKQKNPVRGYSPANSQFCSPSFSLAYHPRKLVVSTSFRLYCQISRCSRITNIGRPSLISSVCGWRECYLSNYAPFISSRYRIHAALDVASAIDVINDLGLDTLTFLAVTVLVVPAFRIVKASPILGFFFAGIVLNQFGAIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAKFAFGMGLTQVVLSTLAFTAFELPPNGAFGTRILEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVQESIWPMLAKESLKALGGLGLLSLGGKFLLRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQVLFREWPNVLSLLAGLIVIKTMIITAIGPRVGLTLQESVRIGLLLSQGGEFAFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEAGRKAAELIDGKVEPESKTKETVNFEATEPVVILGFGQMGQVLANFLSAPLAYGEDGNAVGWPYVAFDLNPSVVKASRKLGFPILYGDGSRPIVLQSAGISSPKAVMIMYTERKRTIEAVQRLRLAFPAIPIYARAKDLMHLLDLKKAGATDAILEDAETSLQLGSRLLKGLGVMSDDVSFLSQLVRDSMELQAEEALRKTDERELDVMQPLQVRVDDLNEGRPPRSLASREDELLRVNKEDVSHILRLQEDANRGKVETGIRDLDGEDGVGVLYCELGLDNNFDDKSEDEVKNLVDSSIPCLTVRDET 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17964690 17989779 + BLOR00894 Blo01g00894 55334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00894 900 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 156 826 - -
Blo01g00894 900 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 156 826 - -
Blo01g00894 900 Gene3D - 198 597 IPR038770 -
Blo01g00894 900 ProSiteProfiles RCK N-terminal domain profile. 621 753 IPR003148 GO:0006813
Blo01g00894 900 Gene3D - 621 791 - -
Blo01g00894 900 Pfam Sodium/hydrogen exchanger family 205 590 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo01g00894 900 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 621 764 IPR036291 -
Blo01g00894 900 Pfam TrkA-N domain 622 745 IPR003148 GO:0006813
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00894 Blo-Chr1:17964690 Blo16g00598 Blo-Chr16:24430924 6.56E-86 dispersed
Blo01g00894 Blo-Chr1:17964690 Blo01g01470 Blo-Chr1:53950899 1.32E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00894 - - pvy:116137337 1101.66