Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00905 ATGGACGCAGGTGATAAAGGCCAAGTTGTGGACGTGAGGTCAGTCGCCGAAGCAGTCGCTGCTGGTGGCGATTCCGATGTTCCGGTCTACGTGGTCGAAAGCCTTTGCATGCGCTGTAGAGAAAACGGGATAACAAGGTTTCTTTTAACTATAATTCCACACTTCAGGAAGATATTGTTGTCGGCCTTTGAATGTACACATTGTGGTGAGAGGAATAATGAGGTTCAATTTGCTGGAGAGATTCAACCACGTGGATGTTGCTACATTTTGGAGGTCTCTGCAGGCGATTTGAAGATGCTTAATCGACAAGTAGTGAAATCTGAGTCTGCTACAATTAGGATTCCTGATTTGGATTTCGAAATTCCTACTGAGGCTCAACGAGGAACTCTTTCTACGGTGGAAGGGATACTGGCTAGAGCAATGGATGAATTGCAGGCTCTTCAAGAAGAGCGTAGGAGATTGGATCCTCAAACCGCCGAAGCAATTGATCAGTTTTTATTGAAATTAAAAGCTTGTGCGACGGGAGATACACCATTTACTTTCATCTTGGATGATCCGGCTGGAAACAGCTTCATTGAGAATCCATATGCTCCATCATCGGACCCATCATTGAGTGTTAAGTTCTATGAGCGAACTCCAGAGCAACAAGCATCATTGGGATATCTTGTTGACTCAATTGAATCAGGAGAAGGTGCTAATGGAGCATTATCAGATGAAAGGGCTGGTGTTTCAGAAGTCGGAACAGTGCCAACTGCATCAGTTGGAGCACCAGCTGGCCATCGAGCAATTGCTCAGAGTAATGGTGCAGAGATTGCTGAAGCTTTATTCCGTTACACTGCACCTGAAGAAGTGATGACTTTTCCATCAACATGTGGCGCTTGTGCTACCAGCTGTGAGACTCGAATGTTTGTTACAAAAATACCTTACTTTCAAGAAGTGATTGTCATGGCATCCACTTGTGATTCATGTGGTTACCGTAATTCTGAGTTGAAGCCTGGTGGGCGAATTCCAGAAAAAGGAAAAGTAATTACTCTCCAAGTAAAGAGCTCTAAGGATCTTAGTCGTGATGTTATAAAGTCAGATACTGCTAGTGTAAGAGTTCCGGATTTGGACTTGGAGCTGGCTAGTGGCACTCTTGGTGGAGTTGTTACAACGGTTGAAGGATTAATTACAAAAATTAGTGAAAGCCTTGAGAGAGTGCATGGATTTACCTTTGGAGACAGTCTTGATGTTGATAGAAAGAGCAAGTGGCAAGATTTTGGAAAGAGGTTAAACAAGCTTTTGACTTTGGAAGAACCTTGGACTTTGATTTTGGACGATGCATTGGCAAATTCATTTGTTGCTCCAGCGACTGATAATATCAAAGATGACTATCAGTTAACGTTTGAGGACTACGAGAGGTCATGGGAGCAGAACGAAGAGCTGGGTCTGAACGACATCCACACGGCATCAGCCGACACTGCTTATGATTTGGGTGAGTAG 1482 43.93 MDAGDKGQVVDVRSVAEAVAAGGDSDVPVYVVESLCMRCRENGITRFLLTIIPHFRKILLSAFECTHCGERNNEVQFAGEIQPRGCCYILEVSAGDLKMLNRQVVKSESATIRIPDLDFEIPTEAQRGTLSTVEGILARAMDELQALQEERRRLDPQTAEAIDQFLLKLKACATGDTPFTFILDDPAGNSFIENPYAPSSDPSLSVKFYERTPEQQASLGYLVDSIESGEGANGALSDERAGVSEVGTVPTASVGAPAGHRAIAQSNGAEIAEALFRYTAPEEVMTFPSTCGACATSCETRMFVTKIPYFQEVIVMASTCDSCGYRNSELKPGGRIPEKGKVITLQVKSSKDLSRDVIKSDTASVRVPDLDLELASGTLGGVVTTVEGLITKISESLERVHGFTFGDSLDVDRKSKWQDFGKRLNKLLTLEEPWTLILDDALANSFVAPATDNIKDDYQLTFEDYERSWEQNEELGLNDIHTASADTAYDLGE 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18938528 18946470 + BLOR00905 Blo01g00905 55345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00905 493 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 4 490 - -
Blo01g00905 493 SMART zpr1 34 194 IPR004457 GO:0008270
Blo01g00905 493 SMART zpr1 289 449 IPR004457 GO:0008270
Blo01g00905 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270
Blo01g00905 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Blo01g00905 493 Pfam ZPR1 zinc-finger domain 289 447 IPR004457 GO:0008270
Blo01g00905 493 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Blo01g00905 493 Coils Coil 130 157 - -
Blo01g00905 493 Gene3D ZPR1, zinc finger domain 23 79 IPR042452 -
Blo01g00905 493 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Blo01g00905 493 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Blo01g00905 493 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Blo01g00905 493 PANTHER ZINC FINGER PROTEIN ZPR1 4 490 IPR040141 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00905 K06874 - mnt:21401433 767.303